Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17810 Brassica napus
A07p14940 Brassica napus
A07p27410 Brassica napus
Aa31LG4G2060 Aethionema arabicum
Actinidia15231 Actinidia chinensis
Actinidia21305 Actinidia chinensis
AL1G34900 Arabidopsis lyrata
AL2G39360 Arabidopsis lyrata
Aqoxy2G03016 Aquilegia oxysepala
Aqoxy6G00258 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea
AT1G21722 Arabidopsis thaliana
AT1G78922 Arabidopsis thaliana
ATR0618G111 Amborella trichopoda
ATR0709G081 Amborella trichopoda
Atru.chr1.2602 Acer truncatum
Atru.chr13.1514 Acer truncatum
AUR62026712 Chenopodium quinoa
BcaB02g07187 Brassica carinata
BcaB07g32170 Brassica carinata
BcaC05g26092 Brassica carinata
BolC5t30769H Brassica oleracea
BolC6t38196H Brassica oleracea
BraA07t29240Z Brassica rapa
BraA07t30382Z Brassica rapa
C05p20700 Brassica napus
C06p30330 Brassica napus
CANSAT01G3073 Cannabis sativa
CANSAT64G1440 Cannabis sativa
CARHR022100 Cardamine hirsuta
CARHR072530 Cardamine hirsuta
Carub.0001s2117 Capsella rubella
Carub.0002s2577 Capsella rubella
Cc10_g12210 Coffea canephora
Cfa003428 Carpinus fangiana
Ciclev10003748m.g Citrus clementina
Ciclev10013938m.g Citrus clementina
Ciclev10013939m.g Citrus clementina
Ciclev10013941m.g Citrus clementina
CiPaw.01G207400 Carya illinoinensis
CiPaw.02G128300 Carya illinoinensis
CiPaw.16G025800 Carya illinoinensis
ClCG11G015880 Citrullus lanatus
Cpa.g.sc64.117 Carica papaya
CsaV3_4G028090 Cucumis sativus L.
CSS0004874 Camellia sinensis var. sinensis
CSS0023973 Camellia sinensis var. sinensis
CSS0028957 Camellia sinensis var. sinensis
DCAR_003562 Daucus carota
Dinv20324 Davidia involucrata
Dinv27285 Davidia involucrata
Duzib093G1216 Durio zibethinus
Duzib192G0394 Durio zibethinus
Eucgr.A00749 Eucalyptus grandis
FAN02G1413 Fragaria x ananassa
FAN09G4514 Fragaria x ananassa
FAN14G5951 Fragaria x ananassa
FvH4_4g20570 Fragaria vesca
FvH4_6g36610 Fragaria vesca
Glyma.04G249200 Glycine max
Glyma.06G113802 Glycine max
Gohir.A05G237000 Gossypium hirsutum
Gohir.D05G239100 Gossypium hirsutum
Gorai.009G247900 Gossypium raimondii
GSVIVG01008837001 Vitis vinifera
Haze_16205 Corylus avellana
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla
HPP92_009982 Vanilla planifolia
Lalb_Chr08g0241421 Lupinus albus
Lj1g0001548 Lotus japonicus
Lj3g0026748 Lotus japonicus
Lj4A634T17 Lonicera japonica
Lsat_1_v5_gn_8_150021 Lactuca sativa
Manes.02G166200 Manihot esculenta
Manes.14G007000 Manihot esculenta
MBI06_g27497_MAGBIO Magnolia biondii
MBI06_g44497_MAGBIO Magnolia biondii
MBI06_g44579_MAGBIO Magnolia biondii
MD04G1024200 Malus domestica
MD04G1024400 Malus domestica
Medtr0032s0080 Medicago truncatula
Medtr3g088090 Medicago truncatula
MELO3C010502.2 Cucumis melo
Migut.C01111 Erythranthe guttata
Migut.E00857 Erythranthe guttata
Migut.E01717 Erythranthe guttata
MSTRG.1426 Avicennia marina
Nitab4.5_0000111g0180 Nicotiana tabacum
Nitab4.5_0003012g0080 Nicotiana tabacum
Nitab4.5_0004208g0030 Nicotiana tabacum
Nitab4.5_0009387g0020 Nicotiana tabacum
Nn5g28367 Nelumbo nucifera
Nn8g41076 Nelumbo nucifera
Oeu009481.1 Olea europaea
Oeu038376.1 Olea europaea
Peaxi162Scf00310g00057 Petunia axillaris
PGR031G3661 Punica granatum
PGR042G3290 Punica granatum
Phvul.007G102200 Phaseolus vulgaris
Phvul.009G125600 Phaseolus vulgaris
Potri.005G180400 Populus trichocarpa
Potri.007G001400 Populus trichocarpa
Potri.007G001650 Populus trichocarpa
Prupe.3G025100 Prunus persica
Psat5g087080 Pisum sativum
PSO063G1689 Papaver somniferum
PSO170G5960 Papaver somniferum
QL06p046996 Quercus lobata
QL06p047014 Quercus lobata
QL09p033796 Quercus lobata
RcHm_v2.0_Chr2g0149081 Rosa chinensis
Rhsim06G0101700 Rhododendron simsii
Sabra05G0136400 Salix brachista
Sabra07G0001200 Salix brachista
SalBow5G0344 Salvia bowleyana
SalBow5G3743 Salvia bowleyana
SalBow8G0153 Salvia bowleyana
Sed0012770 Sechium edule
SGA_v2.0_scaffold2751G54198 Striga asiatica
SGA_v2.0_scaffold52G18944 Striga asiatica
SGA_v2.0_scaffold52G18951 Striga asiatica
SHI31127 Sapria himalayana
Solyc11g017475.1 Solanum lycopersicum
Solyc11g018470.3 Solanum lycopersicum
Sp5g33960 Schrenkiella parvula
TAR625G1307 Trochodendron aralioides
TAR628G1655 Trochodendron aralioides
THA.LOC104800210 Tarenaya hassleriana
THA.LOC104813627 Tarenaya hassleriana
Thecc.06G054300 Theobroma cacao
Thecc.08G129200 Theobroma cacao
Thhalv10008678m.g Eutrema salsugineum
TPR.G21059 Trifolium pratense
TPR.G38724 Trifolium pratense
TWI18G0423 Tripterygium wilfordii
unitig_22.g6227 Utricularia gibba
vmacro10401 Vaccinium macrocarpon
VMungo1309G2764 Vigna mungo
VMungo1309G3162 Vigna mungo
Zm00001eb215960 Zea mays
Zm00001eb306320 Zea mays

User provided reference genes

Program Settings