Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14100 Brassica napus
A03p53840 Brassica napus
Aa31LG6G4950 Aethionema arabicum
Actinidia05237 Actinidia chinensis
Actinidia27417 Actinidia chinensis
Ah.15g090820 Amaranthus hybridus
AL7G30640 Arabidopsis lyrata
Aqoxy7G00506 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AQ6B1J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQ0Z3E Arachis hypogaea
AT4G22870 Arabidopsis thaliana
AT4G22880 Arabidopsis thaliana
ATR0661G511 Amborella trichopoda
Atru.chr12.692 Acer truncatum
Atru.chr12.702 Acer truncatum
Atru.chr12.712 Acer truncatum
Atru.chr9.1497 Acer truncatum
Atru.chr9.1498 Acer truncatum
AUR62010558 Chenopodium quinoa
AUR62017331 Chenopodium quinoa
BcaC09g51066 Brassica carinata
BcaNung01020 Brassica carinata
BcaNung01665 Brassica carinata
BolC1t01672H Brassica oleracea
BolC7t45718H Brassica oleracea
BraA01t01358Z Brassica rapa
C01p17320 Brassica napus
C07p52240 Brassica napus
CAN.G981.63 Capsicum annuum
CANSAT21G0438 Cannabis sativa
CARHR229910 Cardamine hirsuta
CARHR229920 Cardamine hirsuta
Carub.0007s1840 Capsella rubella
Ca_24566_v3 Cicer arietinum L.
Cc08_g13720 Coffea canephora
CDE07G0050 Ceratophyllum demersum
CDE09G0840 Ceratophyllum demersum
Cfa012068 Carpinus fangiana
Ciclev10020815m.g Citrus clementina
CiPaw.11G143400 Carya illinoinensis
COL.COLO4_23801 Corchorus olitorius
Cpa.g.sc29.41 Carica papaya
CSS0010687 Camellia sinensis var. sinensis
CSS0018498 Camellia sinensis var. sinensis
CSS0029211 Camellia sinensis var. sinensis
CSS0046216 Camellia sinensis var. sinensis
DCAR_006772 Daucus carota
Dinv37709 Davidia involucrata
Dinv37711 Davidia involucrata
Dinv37713 Davidia involucrata
Duzib068G0037 Durio zibethinus
Duzib084G0070 Durio zibethinus
Duzib205G0572 Durio zibethinus
ECA240G4446 Erigeron canadensis
EL10Ac5g12683 Beta vulgaris
Eucgr.D01945 Eucalyptus grandis
FAN08G1024 Fragaria x ananassa
FAN13G2745 Fragaria x ananassa
FAN18G0449 Fragaria x ananassa
FvH4_5g01170 Fragaria vesca
Glyma.01G214200 Glycine max
Glyma.11G027700 Glycine max
Gohir.A08G176400 Gossypium hirsutum
Gohir.A12G223500 Gossypium hirsutum
Gohir.D08G195100 Gossypium hirsutum
Gorai.004G205900 Gossypium raimondii
Gorai.008G242100 Gossypium raimondii
GSVIVG01019892001 Vitis vinifera
HanXRQChr04g0095451 Helianthus annuus
HanXRQChr04g0095471 Helianthus annuus
Haze_08990 Corylus avellana
Hma1.2p1_0371F.1_g138300 Hydrangea macrophylla
Hund11541 Selenicereus undatus
Lalb_Chr16g0379911 Lupinus albus
Lj2C202T5 Lonicera japonica
Lj2C202T6 Lonicera japonica
Lj2g0021414 Lotus japonicus
Lsat_1_v5_gn_9_97280 Lactuca sativa
Manes.01G070200 Manihot esculenta
MBI04_g22197_MAGBIO Magnolia biondii
MD03G1001100 Malus domestica
MD06G1071600 Malus domestica
Medtr5g011250 Medicago truncatula
Migut.E01023 Erythranthe guttata
MSTRG.13804 Avicennia marina
Nitab4.5_0003274g0110 Nicotiana tabacum
Nitab4.5_0010547g0010 Nicotiana tabacum
Nn1g01275 Nelumbo nucifera
Nn1g01276 Nelumbo nucifera
Nn6g34327 Nelumbo nucifera
Oeu059047.1 Olea europaea
Os01g0372500 Oryza sativa ssp. japonica
Os06g0626700 Oryza sativa ssp. japonica
Peaxi162Scf00620g00533 Petunia axillaris
PGR031G2793 Punica granatum
PGSC0003DMG400022746 Solanum tuberosum
Phvul.002G152700 Phaseolus vulgaris
Potri.001G113100 Populus trichocarpa
Potri.003G119100 Populus trichocarpa
Prupe.5G086700 Prunus persica
Psat2g180800 Pisum sativum
PSO478G0247 Papaver somniferum
PSO782G2955 Papaver somniferum
QL12p016157 Quercus lobata
RcHm_v2.0_Chr7g0199941 Rosa chinensis
Rhsim07G0096600 Rhododendron simsii
Sabra01G0086500 Salix brachista
Sabra03G0082900 Salix brachista
Sabra03G0083000 Salix brachista
SalBow1G6102 Salvia bowleyana
Sc01g0008930 Simmondsia chinensis
SEGI_01264 Sequoiadendron giganteum
SEGI_05836 Sequoiadendron giganteum
SEGI_06687 Sequoiadendron giganteum
SEGI_10907 Sequoiadendron giganteum
SEGI_13705 Sequoiadendron giganteum
SEGI_19577 Sequoiadendron giganteum
SEGI_23130 Sequoiadendron giganteum
SEGI_25937 Sequoiadendron giganteum
SEGI_27101 Sequoiadendron giganteum
SEGI_37962 Sequoiadendron giganteum
SEGI_41512 Sequoiadendron giganteum
SGA_v2.0_scaffold196G40911 Striga asiatica
SHI27827 Sapria himalayana
Solyc08g080040.4 Solanum lycopersicum
Sopen08g028390 Solanum pennellii
Sp7g20950 Schrenkiella parvula
TAR636G1246 Trochodendron aralioides
THA.LOC104813007 Tarenaya hassleriana
Thecc.03G267700 Theobroma cacao
Thhalv10025559m.g Eutrema salsugineum
TPR.G19583 Trifolium pratense
TWI15G0066 Tripterygium wilfordii
TWI81G0971 Tripterygium wilfordii
unitig_52.g17510 Utricularia gibba
vmacro14016 Vaccinium macrocarpon
VMungo0464G1365 Vigna mungo
VMungo1215G0402 Vigna mungo
VMungo1383G0164 Vigna mungo
Zm00001eb166520 Zea mays
Zm00001eb229190 Zea mays
Zm00001eb287000 Zea mays

User provided reference genes

Program Settings