Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p23930 Brassica napus
A09p50920 Brassica napus
Aa31LG10G12860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2605 Anthoceros agrestis
Ah.04g159510 Amaranthus hybridus
Ah.06g194990 Amaranthus hybridus
AL5G39830 Arabidopsis lyrata
Aqoxy2G02279 Aquilegia oxysepala
Aqoxy7G00307 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DI7635 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KJS3LB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L32XPY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S74BYY Arachis hypogaea
AT3G58140 Arabidopsis thaliana
ATR0215G010 Amborella trichopoda
Atru.chr3.3175 Acer truncatum
AUR62010256 Chenopodium quinoa
AUR62013238 Chenopodium quinoa
BcaB02g07547 Brassica carinata
BcaC07g40186 Brassica carinata
BcaC07g40275 Brassica carinata
BcaC08g44901 Brassica carinata
BolC6t37674H Brassica oleracea
BolC6t37679H Brassica oleracea
BolC8t50964H Brassica oleracea
BraA07t30044Z Brassica rapa
BraA09t40538Z Brassica rapa
C06p25160 Brassica napus
C08p33670 Brassica napus
CAN.G1921.3 Capsicum annuum
CANSAT78G2113 Cannabis sativa
CARHR168500 Cardamine hirsuta
Carub.0005s2499 Capsella rubella
Ca_06096_v3 Cicer arietinum L.
CBR_g19753 Chara braunii
Cc09_g05560 Coffea canephora
CDE05G2281 Ceratophyllum demersum
CDE05G2803 Ceratophyllum demersum
Cfa000667 Carpinus fangiana
Cfa022583 Carpinus fangiana
Ciclev10011787m.g Citrus clementina
CiPaw.09G074000 Carya illinoinensis
ClCG01G025610 Citrullus lanatus
COL.COLO4_20206 Corchorus olitorius
Cpa.g.sc84.15 Carica papaya
Cre02.g079600 Chlamydomonas reinhardtii
CsaV3_6G052840 Cucumis sativus L.
CSS0017532 Camellia sinensis var. sinensis
DCAR_001290 Daucus carota
Dinv25393 Davidia involucrata
Dinv25394 Davidia involucrata
Dinv31163 Davidia involucrata
Duzib151G0861 Durio zibethinus
Duzib212G0992 Durio zibethinus
ECA232G2283 Erigeron canadensis
ECA233G2583 Erigeron canadensis
EL10Ac9g22320 Beta vulgaris
Eucgr.C02274 Eucalyptus grandis
Eucgr.C02393 Eucalyptus grandis
FAN16G0015 Fragaria x ananassa
FAN25G0118 Fragaria x ananassa
FvH4_3g12680 Fragaria vesca
Glyma.02G091300 Glycine max
Glyma.18G291800 Glycine max
Gohir.A10G126900 Gossypium hirsutum
Gohir.D10G139300 Gossypium hirsutum
Gorai.011G155000 Gossypium raimondii
GSVIVG01010923001 Vitis vinifera
GSVIVG01012128001 Vitis vinifera
GSVIVG01020310001 Vitis vinifera
GSVIVG01020335001 Vitis vinifera
GSVIVG01020339001 Vitis vinifera
GSVIVG01020347001 Vitis vinifera
HanXRQChr09g0260411 Helianthus annuus
HanXRQChr09g0260421 Helianthus annuus
HanXRQChr12g0367151 Helianthus annuus
Haze_06152 Corylus avellana
Haze_26151 Corylus avellana
Hma1.2p1_0325F.1_g126090 Hydrangea macrophylla
Hma1.2p1_0666F.1_g199485 Hydrangea macrophylla
HPP92_026254 Vanilla planifolia
Hund00133 Selenicereus undatus
Hund06337 Selenicereus undatus
Lalb_Chr17g0336121 Lupinus albus
Lj1g0015918 Lotus japonicus
Lj5g0016492 Lotus japonicus
Lj6g0002780 Lotus japonicus
Lsat_1_v5_gn_8_118000 Lactuca sativa
Manes.12G056400 Manihot esculenta
Mapoly0072s0003 Marchantia polymorpha
MBI07_g09898_MAGBIO Magnolia biondii
MCO13G295 Micromonas commoda
MD05G1248600 Malus domestica
MD10G1229100 Malus domestica
Medtr7g083030 Medicago truncatula
MELO3C007024.2 Cucumis melo
Migut.D01293 Erythranthe guttata
MSTRG.16365 Avicennia marina
Nitab4.5_0000582g0060 Nicotiana tabacum
Nitab4.5_0004719g0050 Nicotiana tabacum
Nn6g34644 Nelumbo nucifera
Oeu018076.1 Olea europaea
Oeu056054.1 Olea europaea
Oeu056055.1 Olea europaea
Os12g0533700 Oryza sativa ssp. japonica
Peaxi162Scf00858g00012 Petunia axillaris
PGR102G2051 Punica granatum
PGSC0003DMG400023334 Solanum tuberosum
Phvul.008G010100 Phaseolus vulgaris
Potri.013G105200 Populus trichocarpa
Pp3c5_15740 Physcomitrium patens
PRCOL_00002437 Prasinoderma coloniale
Prupe.4G115500 Prunus persica
Psat3g096280 Pisum sativum
PSO063G4358 Papaver somniferum
PSO421G0604 Papaver somniferum
QL04p095526 Quercus lobata
RcHm_v2.0_Chr3g0486261 Rosa chinensis
RcHm_v2.0_Chr3g0486391 Rosa chinensis
RcHm_v2.0_Chr5g0020641 Rosa chinensis
Rhsim04G0004400 Rhododendron simsii
Sabra13G0090900 Salix brachista
SalBow7G0375 Salvia bowleyana
Sc08g0001660 Simmondsia chinensis
Sed0002662 Sechium edule
Sed0008608 Sechium edule
SEGI_05248 Sequoiadendron giganteum
SGA_v2.0_scaffold175G39350 Striga asiatica
SGA_v2.0_scaffold298G47699 Striga asiatica
SMO361G0681 Selaginella moellendorffii
Solyc05g056260.2 Solanum lycopersicum
Sopen05g034650 Solanum pennellii
Sp5g04580 Schrenkiella parvula
TAR626G0350 Trochodendron aralioides
TAR627G1059 Trochodendron aralioides
THA.LOC104800472 Tarenaya hassleriana
THA.LOC104826464 Tarenaya hassleriana
Thecc.04G197300 Theobroma cacao
Thhalv10005992m.g Eutrema salsugineum
TPR.G28546 Trifolium pratense
TWI59G0283 Tripterygium wilfordii
unitig_37.g12049 Utricularia gibba
VMungo1383G0131 Vigna mungo
Zm00001eb153980 Zea mays
Zm00001eb371320 Zea mays

User provided reference genes

Program Settings