Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p07940 Brassica napus
Aa31LG1G3380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.761 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.762 Anthoceros agrestis
Actinidia15447 Actinidia chinensis
Ah.00g000790 Amaranthus hybridus
AL1G22400 Arabidopsis lyrata
Aqoxy3G02144 Aquilegia oxysepala
Aqoxy3G02145 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00YXRD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XU63JK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZND7EK Arachis hypogaea
AT1G11320 Arabidopsis thaliana
ATR0752G131 Amborella trichopoda
Atru.chr13.247 Acer truncatum
AUR62013927 Chenopodium quinoa
AUR62018264 Chenopodium quinoa
BcaB03g13262 Brassica carinata
BcaC05g24992 Brassica carinata
BcaC05g24995 Brassica carinata
BcaC05g25006 Brassica carinata
BolC5t29697H Brassica oleracea
BolC8t49083H Brassica oleracea
BraA06t23994Z Brassica rapa
C05p09550 Brassica napus
C08p14400 Brassica napus
C08p48240 Brassica napus
CARHR011570 Cardamine hirsuta
Carub.0001s1094 Capsella rubella
Ca_15477_v3 Cicer arietinum L.
Cc10_g01360 Coffea canephora
CDE05G0353 Ceratophyllum demersum
CDE05G3077 Ceratophyllum demersum
Cfa006180 Carpinus fangiana
Ciclev10001305m.g Citrus clementina
CiPaw.07G145800 Carya illinoinensis
ClCG08G014060 Citrullus lanatus
COL.COLO4_34816 Corchorus olitorius
Cpa.g.sc26.290 Carica papaya
CsaV3_2G024380 Cucumis sativus L.
CsaV3_2G024390 Cucumis sativus L.
CSS0039974 Camellia sinensis var. sinensis
DCAR_013885 Daucus carota
Dinv31876 Davidia involucrata
Dinv39544 Davidia involucrata
Duzib187G0945 Durio zibethinus
ECA233G5167 Erigeron canadensis
EL10Ac1g02146 Beta vulgaris
Eucgr.H00932 Eucalyptus grandis
FAN11G0106 Fragaria x ananassa
FAN11G2844 Fragaria x ananassa
FAN15G1059 Fragaria x ananassa
FAN16G0769 Fragaria x ananassa
FAN16G1012 Fragaria x ananassa
FAN16G3589 Fragaria x ananassa
FAN21G0637 Fragaria x ananassa
FAN25G1265 Fragaria x ananassa
FAN27G3400 Fragaria x ananassa
FvH4_2g38110 Fragaria vesca
FvH4_3g40530 Fragaria vesca
FvH4_3g40670 Fragaria vesca
Glyma.04G022700 Glycine max
Gohir.A05G024800 Gossypium hirsutum
Gohir.A06G064400 Gossypium hirsutum
Gohir.D05G026300 Gossypium hirsutum
Gorai.009G026400 Gossypium raimondii
Gorai.010G073400 Gossypium raimondii
GSVIVG01009966001 Vitis vinifera
HanXRQChr13g0386891 Helianthus annuus
Haze_04666 Corylus avellana
HPP92_022185 Vanilla planifolia
HPP92_022193 Vanilla planifolia
Hund05166 Selenicereus undatus
Lalb_Chr08g0246221 Lupinus albus
Lj1g0025002 Lotus japonicus
Lj4A800T35 Lonicera japonica
Lsat_1_v5_gn_4_160601 Lactuca sativa
Lsat_1_v5_gn_8_29721 Lactuca sativa
Manes.18G010800 Manihot esculenta
Mapoly0004s0136 Marchantia polymorpha
MBI05_g23374_MAGBIO Magnolia biondii
MBI05_g40808_MAGBIO Magnolia biondii
MD08G1009600 Malus domestica
MD15G1008500 Malus domestica
MD15G1008600 Malus domestica
Medtr3g114130 Medicago truncatula
MELO3C011344.2 Cucumis melo
Migut.C00880 Erythranthe guttata
MSTRG.1171 Avicennia marina
Nitab4.5_0000147g0020 Nicotiana tabacum
Nitab4.5_0001663g0130 Nicotiana tabacum
Nn6g31969 Nelumbo nucifera
Nn6g31970 Nelumbo nucifera
Oeu051167.1 Olea europaea
Os06g0724200 Oryza sativa ssp. japonica
Os10g0438300 Oryza sativa ssp. japonica
Peaxi162Scf01286g00014 Petunia axillaris
PGR031G3016 Punica granatum
PGSC0003DMG400027267 Solanum tuberosum
Phvul.009G018400 Phaseolus vulgaris
Potri.005G242900 Populus trichocarpa
Pp3c16_8820 Physcomitrium patens
Pp3c1_19200 Physcomitrium patens
Pp3c26_6520 Physcomitrium patens
Pp3c2_15075 Physcomitrium patens
Pp3c3_18780 Physcomitrium patens
Pp3c4_19410 Physcomitrium patens
Prupe.1G361500 Prunus persica
Psat0s1401g0120 Pisum sativum
PSO170G5793 Papaver somniferum
PSO700G0289 Papaver somniferum
QL02p012400 Quercus lobata
RcHm_v2.0_Chr5g0073211 Rosa chinensis
RcHm_v2.0_Chr6g0303441 Rosa chinensis
Rhsim06G0018100 Rhododendron simsii
SalBow7G1577 Salvia bowleyana
Sc15g0004770 Simmondsia chinensis
Sed0019030 Sechium edule
SEGI_40641 Sequoiadendron giganteum
SMO012G0029 Selaginella moellendorffii
SMO141G0148 Selaginella moellendorffii
Solyc04g015380.1 Solanum lycopersicum
Solyc04g015390.2 Solanum lycopersicum
Solyc04g015400.3 Solanum lycopersicum
Solyc04g015430.4 Solanum lycopersicum
Sopen04g007450 Solanum pennellii
Sopen04g007460 Solanum pennellii
Sopen04g007470 Solanum pennellii
Sopen04g007480 Solanum pennellii
Sp1g09970 Schrenkiella parvula
TAR625G0839 Trochodendron aralioides
THA.LOC104813224 Tarenaya hassleriana
Thecc.09G106500 Theobroma cacao
Thhalv10007713m.g Eutrema salsugineum
TPR.G17177 Trifolium pratense
TPR.G21884 Trifolium pratense
TPR.G38234 Trifolium pratense
TPR.G684 Trifolium pratense
TPR.G890 Trifolium pratense
TWI36G1703 Tripterygium wilfordii
unitig_46.g18035 Utricularia gibba
vmacro07566 Vaccinium macrocarpon
VMungo1309G1297 Vigna mungo
Zm00001eb222750 Zea mays
Zm00001eb272190 Zea mays

User provided reference genes

Program Settings