Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p29810 Brassica napus
Aa31sc167G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4653 Anthoceros agrestis
Actinidia03850 Actinidia chinensis
Ah.02g115150 Amaranthus hybridus
AL6G16670 Arabidopsis lyrata
Aqoxy1G00576 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5D1JVS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5D1K5R Arachis hypogaea
AT5G06580 Arabidopsis thaliana
ATR0697G015 Amborella trichopoda
Atru.chr8.1261 Acer truncatum
AUR62036303 Chenopodium quinoa
AUR62038413 Chenopodium quinoa
BolC9t59763H Brassica oleracea
BraA10t45020Z Brassica rapa
C09p70190 Brassica napus
CAN.G409.3 Capsicum annuum
CANSAT64G0017 Cannabis sativa
CANSAT64G2176 Cannabis sativa
CARHR206620 Cardamine hirsuta
Carub.0006s0546 Capsella rubella
Ca_09087_v3 Cicer arietinum L.
CBR_g48275 Chara braunii
Cc06_g07030 Coffea canephora
CDE07G2068 Ceratophyllum demersum
Cfa020095 Carpinus fangiana
Cfa024396 Carpinus fangiana
Cfa026190 Carpinus fangiana
Ciclev10011373m.g Citrus clementina
CiPaw.09G024600 Carya illinoinensis
ClCG10G017910 Citrullus lanatus
COL.COLO4_29472 Corchorus olitorius
Cpa.g.sc222.7 Carica papaya
Cre10.g434900 Chlamydomonas reinhardtii
CsaV3_3G038380 Cucumis sativus L.
CSS0012663 Camellia sinensis var. sinensis
CSS0029343 Camellia sinensis var. sinensis
DCAR_013465 Daucus carota
Dinv11906 Davidia involucrata
Dinv25085 Davidia involucrata
Dinv25086 Davidia involucrata
Duzib093G1706 Durio zibethinus
ECA238G0502 Erigeron canadensis
EL10Ac5g11795 Beta vulgaris
Eucgr.A02536 Eucalyptus grandis
FAN02G4310 Fragaria x ananassa
FAN05G2138 Fragaria x ananassa
FAN05G3439 Fragaria x ananassa
FAN05G4019 Fragaria x ananassa
FAN06G0751 Fragaria x ananassa
FAN09G1764 Fragaria x ananassa
FAN14G4987 Fragaria x ananassa
FvH4_6g21120 Fragaria vesca
Glyma.03G205500 Glycine max
Glyma.19G202951 Glycine max
Gohir.A09G131900 Gossypium hirsutum
Gohir.A11G062601 Gossypium hirsutum
Gohir.D02G080666 Gossypium hirsutum
Gohir.D05G379301 Gossypium hirsutum
Gohir.D09G128200 Gossypium hirsutum
Gohir.D10G063250 Gossypium hirsutum
Gorai.005G132900 Gossypium raimondii
Gorai.006G146800 Gossypium raimondii
Gorai.012G042400 Gossypium raimondii
GSVIVG01022507001 Vitis vinifera
HanXRQChr13g0396361 Helianthus annuus
HanXRQChr14g0453201 Helianthus annuus
HanXRQChr17g0565621 Helianthus annuus
Haze_20096 Corylus avellana
Hma1.2p1_0304F.1_g119280 Hydrangea macrophylla
HPP92_012150 Vanilla planifolia
Hund10783 Selenicereus undatus
Lalb_Chr20g0111191 Lupinus albus
Lj1g0003379 Lotus japonicus
Lsat_1_v5_gn_2_102000 Lactuca sativa
Manes.09G041400 Manihot esculenta
Mapoly0056s0055 Marchantia polymorpha
MBI11_g39498_MAGBIO Magnolia biondii
MCO11G780 Micromonas commoda
MD12G1046600 Malus domestica
MD12G1046700 Malus domestica
MD14G1045600 Malus domestica
Medtr7g107050 Medicago truncatula
MELO3C009581.2 Cucumis melo
Migut.J00722 Erythranthe guttata
MSTRG.19322 Avicennia marina
Nitab4.5_0000117g0020 Nicotiana tabacum
Nitab4.5_0000117g0030 Nicotiana tabacum
Nitab4.5_0000670g0060 Nicotiana tabacum
Nitab4.5_0000670g0070 Nicotiana tabacum
Nn2g14430 Nelumbo nucifera
Oeu035654.3 Olea europaea
Oeu063072.1 Olea europaea
Os07g0163000 Oryza sativa ssp. japonica
Peaxi162Scf00210g00224 Petunia axillaris
Peaxi162Scf00210g00225 Petunia axillaris
PGSC0003DMG401008663 Solanum tuberosum
PGSC0003DMG402008663 Solanum tuberosum
PGSC0003DMG403008663 Solanum tuberosum
Phvul.001G199000 Phaseolus vulgaris
Potri.016G064800 Populus trichocarpa
Pp3c20_18170 Physcomitrium patens
Pp3c24_4090 Physcomitrium patens
PRCOL_00003029 Prasinoderma coloniale
Prupe.7G088800 Prunus persica
Prupe.7G088900 Prunus persica
Psat3g026160 Pisum sativum
PSO339G5030 Papaver somniferum
PSO384G0426 Papaver somniferum
QL07p026057 Quercus lobata
QL07p026067 Quercus lobata
QL07p026110 Quercus lobata
QL07p026138 Quercus lobata
RcHm_v2.0_Chr3g0477531 Rosa chinensis
Rhsim03G0058000 Rhododendron simsii
Rhsim03G0058100 Rhododendron simsii
Sabra16G0066600 Salix brachista
SalBow1G1939 Salvia bowleyana
Sc01g0005240 Simmondsia chinensis
Sed0002421 Sechium edule
SEGI_09254 Sequoiadendron giganteum
SEGI_15488 Sequoiadendron giganteum
SEGI_18704 Sequoiadendron giganteum
SGA_v2.0_scaffold112G31558 Striga asiatica
Solyc11g045370.1 Solanum lycopersicum
Solyc11g045390.3 Solanum lycopersicum
Sopen11g020840 Solanum pennellii
Sp6g36280 Schrenkiella parvula
TAR633G1355 Trochodendron aralioides
TAR636G2709 Trochodendron aralioides
THA.LOC104799266 Tarenaya hassleriana
Thecc.05G183400 Theobroma cacao
Thhalv10013121m.g Eutrema salsugineum
Thhalv10014980m.g Eutrema salsugineum
TPR.G14400 Trifolium pratense
TPR.G14418 Trifolium pratense
TWI53G0913 Tripterygium wilfordii
unitig_26.g9147 Utricularia gibba
vmacro07522 Vaccinium macrocarpon
vmacro07523 Vaccinium macrocarpon
vmacro07524 Vaccinium macrocarpon
vmacro07525 Vaccinium macrocarpon
VMungo1383G2386 Vigna mungo
Zm00001eb117230 Zea mays

User provided reference genes

Program Settings