Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34260 Brassica napus
A03p41800 Brassica napus
A05p28300 Brassica napus
Aa31LG8G7350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1748 Anthoceros agrestis
Actinidia10719 Actinidia chinensis
Actinidia10720 Actinidia chinensis
AL3G34380 Arabidopsis lyrata
Aqoxy1G03309 Aquilegia oxysepala
Aqoxy3G00120 Aquilegia oxysepala
Aqoxy5G02091 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ICWX02 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XKJ78D Arachis hypogaea
AT2G24410 Arabidopsis thaliana
AT3G20550 Arabidopsis thaliana
ATR0752G127 Amborella trichopoda
Atru.chr2.3269 Acer truncatum
Atru.chr2.3744 Acer truncatum
Atru.chr2.3757 Acer truncatum
AUR62008441 Chenopodium quinoa
AUR62021649 Chenopodium quinoa
BcaB04g19113 Brassica carinata
BcaC01g03550 Brassica carinata
BcaC09g49000 Brassica carinata
BolC3t17407H Brassica oleracea
BolC5t33094H Brassica oleracea
BraA03t13333Z Brassica rapa
BraA05t21712Z Brassica rapa
C01p18700 Brassica napus
C03p51180 Brassica napus
CAN.G1781.10 Capsicum annuum
CANSAT54G0232 Cannabis sativa
CARHR096320 Cardamine hirsuta
Carub.0003s2052 Capsella rubella
Ca_14709_v3 Cicer arietinum L.
CBR_g38419 Chara braunii
Cc05_g13470 Coffea canephora
CDE02G2943 Ceratophyllum demersum
CDE05G0897 Ceratophyllum demersum
Cfa025954 Carpinus fangiana
Ciclev10008061m.g Citrus clementina
CiPaw.11G186500 Carya illinoinensis
ClCG05G014480 Citrullus lanatus
COL.COLO4_09623 Corchorus olitorius
Cpa.g.sc97.43 Carica papaya
Cre09.g390430 Chlamydomonas reinhardtii
CsaV3_3G023250 Cucumis sativus L.
CSS0036538 Camellia sinensis var. sinensis
DCAR_019897 Daucus carota
Dinv22285 Davidia involucrata
Dinv40732 Davidia involucrata
Duzib213G0030 Durio zibethinus
Duzib268G1307 Durio zibethinus
ECA246G0930 Erigeron canadensis
EL10Ac4g07904 Beta vulgaris
EL10Ac5g11049 Beta vulgaris
Eucgr.F00968 Eucalyptus grandis
FAN05G2630 Fragaria x ananassa
FAN09G4771 Fragaria x ananassa
FAN11G3177 Fragaria x ananassa
FAN14G1203 Fragaria x ananassa
FAN16G3277 Fragaria x ananassa
FAN21G2996 Fragaria x ananassa
FvH4_3g22101 Fragaria vesca
FvH4_6g43590 Fragaria vesca
Glyma.09G101200 Glycine max
Glyma.18G102900 Glycine max
Gohir.A13G139300 Gossypium hirsutum
Gohir.D13G144100 Gossypium hirsutum
Gorai.013G161200 Gossypium raimondii
GSVIVG01030604001 Vitis vinifera
HanXRQChr08g0235221 Helianthus annuus
Haze_06035 Corylus avellana
Haze_09642 Corylus avellana
Haze_09643 Corylus avellana
Hma1.2p1_0938F.1_g239180 Hydrangea macrophylla
HPP92_019925 Vanilla planifolia
Hund14204 Selenicereus undatus
Lalb_Chr20g0114191 Lupinus albus
Lj6g0026690 Lotus japonicus
Lsat_1_v5_gn_5_13800 Lactuca sativa
Lsat_1_v5_gn_5_38280 Lactuca sativa
Manes.03G127500 Manihot esculenta
Manes.15G074502 Manihot esculenta
Mapoly0068s0031 Marchantia polymorpha
MCO07G024 Micromonas commoda
MCO09G834 Micromonas commoda
MD03G1208700 Malus domestica
MD06G1125500 Malus domestica
MD11G1223400 Malus domestica
Medtr3g049440 Medicago truncatula
Medtr5g081620 Medicago truncatula
MELO3C018081.2 Cucumis melo
MELO3C030736.2 Cucumis melo
Migut.H01845 Erythranthe guttata
MSTRG.12962 Avicennia marina
Nitab4.5_0001393g0210 Nicotiana tabacum
Nitab4.5_0005048g0010 Nicotiana tabacum
Nn1g03595 Nelumbo nucifera
Nn1g07082 Nelumbo nucifera
Oeu007601.1 Olea europaea
Os05g0545600 Oryza sativa ssp. japonica
Peaxi162Scf00032g02417 Petunia axillaris
PGR042G3618 Punica granatum
PGSC0003DMG400014426 Solanum tuberosum
Phvul.006G037500 Phaseolus vulgaris
Potri.001G420400 Populus trichocarpa
Potri.011G136102 Populus trichocarpa
Pp3c19_14080 Physcomitrium patens
PRCOL_00003554 Prasinoderma coloniale
Prupe.4G208000 Prunus persica
Psat5g183400 Pisum sativum
PSO017G2282 Papaver somniferum
PSO541G0017 Papaver somniferum
PSO675G4432 Papaver somniferum
QL03p062207 Quercus lobata
QL03p062820 Quercus lobata
QL06p002269 Quercus lobata
QL08p012200 Quercus lobata
RcHm_v2.0_Chr2g0160171 Rosa chinensis
RcHm_v2.0_Chr4g0405041 Rosa chinensis
RcHm_v2.0_Chr5g0037921 Rosa chinensis
Rhsim04G0000500 Rhododendron simsii
Rhsim04G0001600 Rhododendron simsii
Sabra16G0285400 Salix brachista
SalBow7G4088 Salvia bowleyana
Sc03g0008800 Simmondsia chinensis
Sed0006852 Sechium edule
SEGI_03914 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32129 Striga asiatica
SMO367G0870 Selaginella moellendorffii
Solyc10g006390.3 Solanum lycopersicum
Sopen10g002340 Solanum pennellii
Sp3g18560 Schrenkiella parvula
TAR626G1940 Trochodendron aralioides
Thecc.07G044600 Theobroma cacao
Thhalv10011119m.g Eutrema salsugineum
Thhalv10024125m.g Eutrema salsugineum
TPR.G13540 Trifolium pratense
TPR.G13552 Trifolium pratense
TPR.G40522 Trifolium pratense
TWI38G1498 Tripterygium wilfordii
unitig_22.g5751 Utricularia gibba
vmacro09737 Vaccinium macrocarpon
VMungo0540G1829 Vigna mungo
Zm00001eb286040 Zea mays

User provided reference genes

Program Settings