Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p29710 Brassica napus
Aa31sc40G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2102 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2103 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2104 Anthoceros agrestis
Actinidia14374 Actinidia chinensis
Actinidia14375 Actinidia chinensis
Actinidia22051 Actinidia chinensis
Actinidia22052 Actinidia chinensis
Actinidia22053 Actinidia chinensis
Actinidia22054 Actinidia chinensis
Actinidia32405 Actinidia chinensis
Actinidia32406 Actinidia chinensis
Ah.13g075710 Amaranthus hybridus
AL6G16770 Arabidopsis lyrata
Aqoxy1G00145 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6E61XV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U2Q4B5 Arachis hypogaea
AT5G06680 Arabidopsis thaliana
ATR0598G120 Amborella trichopoda
ATR0598G264 Amborella trichopoda
Atru.chr8.1150 Acer truncatum
AUR62015335 Chenopodium quinoa
BcaB05g21654 Brassica carinata
BcaB05g21655 Brassica carinata
BcaC06g32554 Brassica carinata
BolC2t06246H Brassica oleracea
BolC9t59751H Brassica oleracea
BraA02t04889Z Brassica rapa
BraA10t45012Z Brassica rapa
C02p02810 Brassica napus
C09p70080 Brassica napus
CAN.G824.31 Capsicum annuum
CANSAT25G3114 Cannabis sativa
CANSAT64G2519 Cannabis sativa
CARHR206520 Cardamine hirsuta
Carub.0006s0556 Capsella rubella
Ca_08535_v3 Cicer arietinum L.
CBR_g7989 Chara braunii
Cc06_g15670 Coffea canephora
CDE04G2925 Ceratophyllum demersum
CDE06G1527 Ceratophyllum demersum
Cfa020147 Carpinus fangiana
Cfa021858 Carpinus fangiana
Ciclev10011052m.g Citrus clementina
CiPaw.09G028800 Carya illinoinensis
CiPaw.10G025500 Carya illinoinensis
ClCG04G001070 Citrullus lanatus
COL.COLO4_29354 Corchorus olitorius
Cpa.g.sc85.62 Carica papaya
Cre11.g467745 Chlamydomonas reinhardtii
CsaV3_4G031280 Cucumis sativus L.
CSS0001135 Camellia sinensis var. sinensis
DCAR_013660 Daucus carota
Dinv16368 Davidia involucrata
Duzib093G1426 Durio zibethinus
Duzib106G1052 Durio zibethinus
ECA247G1565 Erigeron canadensis
ECA248G3562 Erigeron canadensis
EL10Ac2g03990 Beta vulgaris
Eucgr.K01849 Eucalyptus grandis
FAN02G3358 Fragaria x ananassa
FAN05G2417 Fragaria x ananassa
FAN14G2436 Fragaria x ananassa
FvH4_6g21970 Fragaria vesca
Glyma.03G146200 Glycine max
Glyma.19G149500 Glycine max
Gohir.A04G057400 Gossypium hirsutum
Gohir.A09G003250 Gossypium hirsutum
Gohir.D03G083120 Gossypium hirsutum
Gohir.D04G089200 Gossypium hirsutum
Gorai.012G099300 Gossypium raimondii
GSVIVG01033474001 Vitis vinifera
HanXRQChr01g0010041 Helianthus annuus
HanXRQChr15g0491321 Helianthus annuus
Haze_20018 Corylus avellana
HPP92_028617 Vanilla planifolia
HPP92_028618 Vanilla planifolia
HPP92_028666 Vanilla planifolia
HPP92_028667 Vanilla planifolia
Hund19211 Selenicereus undatus
Lalb_Chr18g0048011 Lupinus albus
Lj1g0024119 Lotus japonicus
Lju124A23G70 Lonicera japonica
Lsat_1_v5_gn_5_165321 Lactuca sativa
Lsat_1_v5_gn_9_26020 Lactuca sativa
Manes.09G037300 Manihot esculenta
Mapoly0001s0406 Marchantia polymorpha
MBI19_g17421_MAGBIO Magnolia biondii
MCO03G564 Micromonas commoda
MD12G1055200 Malus domestica
MD14G1054400 Malus domestica
Medtr7g093560 Medicago truncatula
MELO3C009016.2 Cucumis melo
Migut.J01852 Erythranthe guttata
MSTRG.19916 Avicennia marina
Nitab4.5_0000663g0140 Nicotiana tabacum
Nitab4.5_0006360g0040 Nicotiana tabacum
Nn7g35977 Nelumbo nucifera
Oeu034269.1 Olea europaea
Oeu047209.1 Olea europaea
Os09g0446200 Oryza sativa ssp. japonica
Peaxi162Scf00169g01812 Petunia axillaris
PGR142G1146 Punica granatum
PGSC0003DMG400002716 Solanum tuberosum
Phvul.001G144000 Phaseolus vulgaris
Potri.006G194200 Populus trichocarpa
Potri.016G059900 Populus trichocarpa
Pp3c20_16750 Physcomitrium patens
Pp3c24_16220 Physcomitrium patens
Pp3c8_15910 Physcomitrium patens
Pp3c8_15940 Physcomitrium patens
PRCOL_00005400 Prasinoderma coloniale
Prupe.7G080400 Prunus persica
Psat3g067160 Pisum sativum
PSO339G4020 Papaver somniferum
PSO384G2020 Papaver somniferum
QL07p024331 Quercus lobata
QL07p024348 Quercus lobata
QL07p024412 Quercus lobata
RcHm_v2.0_Chr3g0479271 Rosa chinensis
Rhsim03G0004600 Rhododendron simsii
Sabra06G0149000 Salix brachista
Sabra16G0062700 Salix brachista
SalBow6G0811 Salvia bowleyana
Sc25g0005070 Simmondsia chinensis
Sed0021834 Sechium edule
SGA_v2.0_scaffold105G30506 Striga asiatica
SHI31781 Sapria himalayana
SMO356G0383 Selaginella moellendorffii
Solyc09g009140.3 Solanum lycopersicum
Sopen09g003860 Solanum pennellii
Sp6g36190 Schrenkiella parvula
TAR369G0383 Trochodendron aralioides
TAR623G0668 Trochodendron aralioides
THA.LOC104809935 Tarenaya hassleriana
Thecc.05G174500 Theobroma cacao
Thhalv10012676m.g Eutrema salsugineum
TPR.G35787 Trifolium pratense
TWI53G1098 Tripterygium wilfordii
TWI77G0968 Tripterygium wilfordii
unitig_0.g528 Utricularia gibba
vmacro07891 Vaccinium macrocarpon
VMungo1383G1342 Vigna mungo
Zm00001eb314430 Zea mays
Zm00001eb409410 Zea mays

User provided reference genes

Program Settings