Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p16970 Brassica napus
A09p09640 Brassica napus
Aa31LG1G15480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1821 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1822 Anthoceros agrestis
Actinidia12070 Actinidia chinensis
Actinidia36514 Actinidia chinensis
Ah.02g124120 Amaranthus hybridus
Ah.03g144090 Amaranthus hybridus
AL8G44450 Arabidopsis lyrata
Aqoxy6G00906 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IMYE37 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VE46QQ Arachis hypogaea
AT5G66930 Arabidopsis thaliana
ATR0225G009 Amborella trichopoda
Atru.chr3.440 Acer truncatum
AUR62001971 Chenopodium quinoa
AUR62003832 Chenopodium quinoa
AUR62028910 Chenopodium quinoa
BcaB02g09970 Brassica carinata
BcaB04g20086 Brassica carinata
BcaC03g18393 Brassica carinata
BcaC04g23174 Brassica carinata
BcaC06g34767 Brassica carinata
BolC2t12528H Brassica oleracea
BolC7t43007H Brassica oleracea
BolC9t54027H Brassica oleracea
BraA07t29424Z Brassica rapa
BraA09t36613Z Brassica rapa
C02p64670 Brassica napus
C07p24820 Brassica napus
C09p11390 Brassica napus
CAN.G470.7 Capsicum annuum
CARHR280750 Cardamine hirsuta
Carub.0008s2757 Capsella rubella
Ca_22210_v3 Cicer arietinum L.
Ca_22228_v3 Cicer arietinum L.
CBR_g23008 Chara braunii
Cc07_g05640 Coffea canephora
CDE02G0556 Ceratophyllum demersum
Cfa003962 Carpinus fangiana
Ciclev10026393m.g Citrus clementina
Ciclev10027037m.g Citrus clementina
CiPaw.01G025900 Carya illinoinensis
CiPaw.02G011700 Carya illinoinensis
ClCG01G016600 Citrullus lanatus
COL.COLO4_11341 Corchorus olitorius
Cpa.g.sc6.408 Carica papaya
Cre07.g334700 Chlamydomonas reinhardtii
CsaV3_6G042980 Cucumis sativus L.
CSS0024932 Camellia sinensis var. sinensis
DCAR_025697 Daucus carota
Dinv29944 Davidia involucrata
Dinv39902 Davidia involucrata
Duzib147G0596 Durio zibethinus
Duzib264G0045 Durio zibethinus
Duzib264G0685 Durio zibethinus
ECA238G1636 Erigeron canadensis
EL10Ac6g15144 Beta vulgaris
Eucgr.H01988 Eucalyptus grandis
FAN19G0163 Fragaria x ananassa
FAN19G1388 Fragaria x ananassa
FAN23G1215 Fragaria x ananassa
FAN26G1713 Fragaria x ananassa
FAN28G1734 Fragaria x ananassa
FvH4_1g14960 Fragaria vesca
Glyma.17G180900 Glycine max
Gohir.A12G069100 Gossypium hirsutum
Gohir.D12G090200 Gossypium hirsutum
Gorai.008G072800 Gossypium raimondii
GSVIVG01005060001 Vitis vinifera
HanXRQChr07g0199901 Helianthus annuus
HanXRQChr14g0448331 Helianthus annuus
Haze_15460 Corylus avellana
Hma1.2p1_0687F.1_g203520 Hydrangea macrophylla
HPP92_024294 Vanilla planifolia
HPP92_024303 Vanilla planifolia
Hund13583 Selenicereus undatus
Lalb_Chr09g0333681 Lupinus albus
Lj4g0026236 Lotus japonicus
Lj7A44T18 Lonicera japonica
Lsat_1_v5_gn_2_86920 Lactuca sativa
Manes.13G129200 Manihot esculenta
Mapoly0011s0084 Marchantia polymorpha
MBI16_g19902_MAGBIO Magnolia biondii
MCO07G250 Micromonas commoda
MD02G1163200 Malus domestica
MD15G1276200 Malus domestica
Medtr8g079240 Medicago truncatula
MELO3C007534.2 Cucumis melo
Migut.H00475 Erythranthe guttata
MSTRG.15402 Avicennia marina
Nitab4.5_0000806g0140 Nicotiana tabacum
Nitab4.5_0002157g0070 Nicotiana tabacum
Nitab4.5_0003750g0060 Nicotiana tabacum
Nitab4.5_0009901g0010 Nicotiana tabacum
Nn5g29376 Nelumbo nucifera
Nn6g32115 Nelumbo nucifera
Oeu004887.1 Olea europaea
Os12g0428200 Oryza sativa ssp. japonica
Os12g0446700 Oryza sativa ssp. japonica
Peaxi162Scf00049g01010 Petunia axillaris
Peaxi162Scf00993g00120 Petunia axillaris
PGR102G2816 Punica granatum
PGSC0003DMG400010070 Solanum tuberosum
Phvul.003G248000 Phaseolus vulgaris
Potri.007G037800 Populus trichocarpa
Pp3c11_5110 Physcomitrium patens
PRCOL_00006110 Prasinoderma coloniale
Prupe.7G140800 Prunus persica
Psat4g088960 Pisum sativum
Psat4g089040 Pisum sativum
PSO541G4895 Papaver somniferum
PSO675G4006 Papaver somniferum
QL06p043337 Quercus lobata
RcHm_v2.0_Chr2g0104011 Rosa chinensis
Rhsim08G0104900 Rhododendron simsii
RhsimUnG0070600 Rhododendron simsii
Sabra07G0034100 Salix brachista
Sc03g0001310 Simmondsia chinensis
Sed0021889 Sechium edule
SEGI_13826 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07238 Striga asiatica
SGA_v2.0_scaffold204G41608 Striga asiatica
SGA_v2.0_scaffold27G11440 Striga asiatica
SMO271G0126 Selaginella moellendorffii
Solyc02g065180.3 Solanum lycopersicum
Solyc02g090330.3 Solanum lycopersicum
Sopen02g015310 Solanum pennellii
Sopen02g035010 Solanum pennellii
Sp2g29730 Schrenkiella parvula
TAR376G0500 Trochodendron aralioides
TAR628G0491 Trochodendron aralioides
THA.LOC104819229 Tarenaya hassleriana
THA.LOC104821262 Tarenaya hassleriana
Thecc.01G049700 Theobroma cacao
Thhalv10005270m.g Eutrema salsugineum
TPR.G40637 Trifolium pratense
TPR.G672 Trifolium pratense
TWI09G0689 Tripterygium wilfordii
TWI53G1273 Tripterygium wilfordii
unitig_736.g22369 Utricularia gibba
vmacro17912 Vaccinium macrocarpon
VMungo0251G0766 Vigna mungo
Zm00001eb184160 Zea mays
Zm00001eb184240 Zea mays

User provided reference genes

Program Settings