Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p13950 Brassica napus
A07p39200 Brassica napus
Aa31LG7G2700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3310 Anthoceros agrestis
Actinidia12360 Actinidia chinensis
Actinidia24963 Actinidia chinensis
Actinidia25650 Actinidia chinensis
AL1G30250 Arabidopsis lyrata
AL2G33020 Arabidopsis lyrata
Aqoxy7G03270 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9Q453L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R51DI5 Arachis hypogaea
AT1G17890 Arabidopsis thaliana
AT1G73250 Arabidopsis thaliana
ATR0332G026 Amborella trichopoda
Atru.chr7.401 Acer truncatum
AUR62025384 Chenopodium quinoa
AUR62028366 Chenopodium quinoa
BcaB03g15037 Brassica carinata
BcaB07g34013 Brassica carinata
BcaC07g38879 Brassica carinata
BcaC08g46743 Brassica carinata
BolC5t30329H Brassica oleracea
BolC6t39778H Brassica oleracea
BraA07t31469Z Brassica rapa
C05p16270 Brassica napus
C06p47390 Brassica napus
C08p18240 Brassica napus
CAN.G1190.14 Capsicum annuum
CAN.G1190.15 Capsicum annuum
CAN.G1190.16 Capsicum annuum
CANSAT11G2252 Cannabis sativa
CARHR018500 Cardamine hirsuta
CARHR066260 Cardamine hirsuta
CARHR247960 Cardamine hirsuta
Carub.0001s1762 Capsella rubella
Ca_07714_v3 Cicer arietinum L.
CBR_g50901 Chara braunii
CBR_g8654 Chara braunii
Cc06_g14220 Coffea canephora
CDE11G1052 Ceratophyllum demersum
Cfa003006 Carpinus fangiana
Ciclev10008917m.g Citrus clementina
CiPaw.15G163400 Carya illinoinensis
CiPaw.16G105900 Carya illinoinensis
ClCG02G014280 Citrullus lanatus
COL.COLO4_15197 Corchorus olitorius
Cpa.g.sc43.20 Carica papaya
Cpa.g.sc43.21 Carica papaya
CsaV3_2G007730 Cucumis sativus L.
CSS0038851 Camellia sinensis var. sinensis
DCAR_024732 Daucus carota
Dinv41330 Davidia involucrata
Dinv42807 Davidia involucrata
Dinv42808 Davidia involucrata
Dinv43293 Davidia involucrata
Dinv43294 Davidia involucrata
Duzib168G1041 Durio zibethinus
ECA233G5554 Erigeron canadensis
EL10Ac8g18896 Beta vulgaris
Eucgr.C01236 Eucalyptus grandis
FAN12G3030 Fragaria x ananassa
FAN17G0928 Fragaria x ananassa
FvH4_4g08850 Fragaria vesca
Glyma.09G280100 Glycine max
Glyma.18G208900 Glycine max
Gohir.A05G007600 Gossypium hirsutum
Gohir.D05G008500 Gossypium hirsutum
Gorai.009G008600 Gossypium raimondii
GSVIVG01023706001 Vitis vinifera
HanXRQChr06g0170251 Helianthus annuus
HanXRQChr15g0468821 Helianthus annuus
Haze_01022 Corylus avellana
Haze_19066 Corylus avellana
Haze_19072 Corylus avellana
Hma1.2p1_0284F.1_g113760 Hydrangea macrophylla
HPP92_020611 Vanilla planifolia
Hund01206 Selenicereus undatus
Hund27546 Selenicereus undatus
Lalb_Chr19g0124141 Lupinus albus
Lj1g0001762 Lotus japonicus
Lj6g0026768 Lotus japonicus
Lj9A723T41 Lonicera japonica
Lj9C724T6 Lonicera japonica
Lsat_1_v5_gn_5_72880 Lactuca sativa
Manes.04G001000 Manihot esculenta
Mapoly0016s0056 Marchantia polymorpha
Mapoly0064s0048 Marchantia polymorpha
MBI14_g16421_MAGBIO Magnolia biondii
MCO16G228 Micromonas commoda
MD05G1099800 Malus domestica
MD10G1105500 Malus domestica
Medtr5g097450 Medicago truncatula
Medtr5g097460 Medicago truncatula
Medtr7g108490 Medicago truncatula
MELO3C004113.2 Cucumis melo
Migut.J01400 Erythranthe guttata
MSTRG.6169 Avicennia marina
Nitab4.5_0001036g0010 Nicotiana tabacum
Nitab4.5_0002809g0070 Nicotiana tabacum
Nn5g27515 Nelumbo nucifera
Oeu024899.1 Olea europaea
Oeu031860.1 Olea europaea
Os03g0853200 Oryza sativa ssp. japonica
Os06g0652300 Oryza sativa ssp. japonica
Os06g0652400 Oryza sativa ssp. japonica
Peaxi162Scf00038g00063 Petunia axillaris
PGR102G1617 Punica granatum
PGSC0003DMG400011158 Solanum tuberosum
Phvul.008G090200 Phaseolus vulgaris
Potri.006G179100 Populus trichocarpa
Potri.018G101700 Populus trichocarpa
Pp3c10_6390 Physcomitrium patens
Prupe.1G100900 Prunus persica
Psat0s2845g0200 Pisum sativum
PSO063G5527 Papaver somniferum
PSO782G2734 Papaver somniferum
QL02p094407 Quercus lobata
RcHm_v2.0_Chr4g0405311 Rosa chinensis
Rhsim01G0021100 Rhododendron simsii
Sabra18G0087400 Salix brachista
SalBow6G0126 Salvia bowleyana
Sc18g0003190 Simmondsia chinensis
Sed0021443 Sechium edule
Sed0024595 Sechium edule
SEGI_01162 Sequoiadendron giganteum
SGA_v2.0_scaffold265G46071 Striga asiatica
SGA_v2.0_scaffold45G17002 Striga asiatica
SHI02828 Sapria himalayana
SMO143G0303 Selaginella moellendorffii
Solyc07g006070.1 Solanum lycopersicum
Sopen07g002190 Solanum pennellii
Sp1g15980 Schrenkiella parvula
Sp5g28220 Schrenkiella parvula
TAR383G0114 Trochodendron aralioides
TAR626G1850 Trochodendron aralioides
THA.LOC104812192 Tarenaya hassleriana
Thecc.01G393000 Theobroma cacao
Thecc.09G155400 Theobroma cacao
Thhalv10008184m.g Eutrema salsugineum
Thhalv10018855m.g Eutrema salsugineum
TPR.G18676 Trifolium pratense
TWI34G0184 Tripterygium wilfordii
unitig_748.g7192 Utricularia gibba
VMungo1383G1013 Vigna mungo
Zm00001eb388990 Zea mays

User provided reference genes

Program Settings