Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p06550 Brassica napus
Aa31LG11G3490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3337 Anthoceros agrestis
Actinidia08648 Actinidia chinensis
Actinidia34217 Actinidia chinensis
Ah.03g137970 Amaranthus hybridus
Ah.07g205630 Amaranthus hybridus
AL6G35670 Arabidopsis lyrata
Aqoxy7G00083 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.T9I2S7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZR5QI2 Arachis hypogaea
AT5G24260 Arabidopsis thaliana
ATR0602G298 Amborella trichopoda
Atru.chr12.2188 Acer truncatum
AUR62006093 Chenopodium quinoa
AUR62019399 Chenopodium quinoa
BcaB04g18355 Brassica carinata
BcaB04g19831 Brassica carinata
BcaC04g23536 Brassica carinata
BolC9t53643H Brassica oleracea
BraA09t36300Z Brassica rapa
C09p07310 Brassica napus
CAN.G968.3 Capsicum annuum
CANSAT21G1132 Cannabis sativa
CARHR189270 Cardamine hirsuta
CARHR189280 Cardamine hirsuta
Carub.0006s2201 Capsella rubella
Ca_16704_v3 Cicer arietinum L.
CBR_g26168 Chara braunii
Cc02_g01600 Coffea canephora
CDE04G2343 Ceratophyllum demersum
Cfa016227 Carpinus fangiana
Cfa024188 Carpinus fangiana
Cfa026592 Carpinus fangiana
Ciclev10018947m.g Citrus clementina
CiPaw.05G196500 Carya illinoinensis
ClCG01G000430 Citrullus lanatus
COL.COLO4_16758 Corchorus olitorius
Cpa.g.sc3.82 Carica papaya
CsaV3_5G000500 Cucumis sativus L.
CSS0012677 Camellia sinensis var. sinensis
CSS0032106 Camellia sinensis var. sinensis
DCAR_008919 Daucus carota
Dinv35331 Davidia involucrata
Duzib068G1071 Durio zibethinus
Duzib205G0228 Durio zibethinus
ECA238G3029 Erigeron canadensis
EL10Ac3g05287 Beta vulgaris
Eucgr.K00374 Eucalyptus grandis
FAN01G1488 Fragaria x ananassa
FAN03G3191 Fragaria x ananassa
FAN06G1404 Fragaria x ananassa
FAN06G4927 Fragaria x ananassa
FAN10G0692 Fragaria x ananassa
FAN10G4178 Fragaria x ananassa
FvH4_7g31630 Fragaria vesca
Glyma.04G236000 Glycine max
Glyma.06G128600 Glycine max
Gohir.1Z049319 Gossypium hirsutum
Gohir.A05G414800 Gossypium hirsutum
Gohir.D04G001366 Gossypium hirsutum
Gohir.D10G185350 Gossypium hirsutum
Gorai.011G207800 Gossypium raimondii
Gorai.012G002400 Gossypium raimondii
GSVIVG01038548001 Vitis vinifera
HanXRQChr04g0100521 Helianthus annuus
Haze_00215 Corylus avellana
Hma1.2p1_0404F.1_g145430 Hydrangea macrophylla
HPP92_002921 Vanilla planifolia
HPP92_002922 Vanilla planifolia
HPP92_002923 Vanilla planifolia
HPP92_028640 Vanilla planifolia
HPP92_028641 Vanilla planifolia
Hund11663 Selenicereus undatus
Lalb_Chr08g0240261 Lupinus albus
Lj1A1019T47 Lonicera japonica
Lj1C1016T11 Lonicera japonica
Lj1C1016T12 Lonicera japonica
Lj1C1017G3 Lonicera japonica
Lj1g0017393 Lotus japonicus
Lju170A22T15 Lonicera japonica
Lsat_1_v5_gn_2_136081 Lactuca sativa
Manes.01G183000 Manihot esculenta
Manes.02G143100 Manihot esculenta
Mapoly0005s0073 Marchantia polymorpha
MBI06_g41630_MAGBIO Magnolia biondii
MBI06_g46249_MAGBIO Magnolia biondii
MCO02G195 Micromonas commoda
MD01G1219200 Malus domestica
MD07G1288900 Malus domestica
Medtr3g091420 Medicago truncatula
MELO3C005886.2 Cucumis melo
Migut.F00216 Erythranthe guttata
Migut.F01031 Erythranthe guttata
MSTRG.27029 Avicennia marina
Nitab4.5_0005599g0010 Nicotiana tabacum
Nitab4.5_0010146g0010 Nicotiana tabacum
Nn1g00241 Nelumbo nucifera
Nn3g18991 Nelumbo nucifera
Nn5g31086 Nelumbo nucifera
Oeu037073.1 Olea europaea
Oeu060983.2 Olea europaea
Oeu060984.1 Olea europaea
Os02g0290600 Oryza sativa ssp. japonica
Peaxi162Scf00717g00321 Petunia axillaris
PGR142G4232 Punica granatum
PGSC0003DMG400009126 Solanum tuberosum
Phvul.009G052800 Phaseolus vulgaris
Potri.012G014900 Populus trichocarpa
Potri.015G013400 Populus trichocarpa
Pp3c3_30620 Physcomitrium patens
Pp3c8_9480 Physcomitrium patens
PRCOL_00001990 Prasinoderma coloniale
Prupe.2G310400 Prunus persica
Psat5g078640 Pisum sativum
PSO135G0649 Papaver somniferum
PSO384G0679 Papaver somniferum
QL09p009347 Quercus lobata
RcHm_v2.0_Chr1g0380701 Rosa chinensis
Rhsim03G0208500 Rhododendron simsii
Sabra12G0017000 Salix brachista
Sabra15G0010900 Salix brachista
SalBow4G0231 Salvia bowleyana
Sc19g0000870 Simmondsia chinensis
Sed0008428 Sechium edule
Sed0021974 Sechium edule
SEGI_01874 Sequoiadendron giganteum
SEGI_15573 Sequoiadendron giganteum
SEGI_29845 Sequoiadendron giganteum
SEGI_31502 Sequoiadendron giganteum
SEGI_36069 Sequoiadendron giganteum
SGA_v2.0_scaffold192G40551 Striga asiatica
SMO334G0022 Selaginella moellendorffii
Solyc03g083330.3 Solanum lycopersicum
Sopen03g023080 Solanum pennellii
Sp2g23110 Schrenkiella parvula
TAR375G0122 Trochodendron aralioides
TAR629G3137 Trochodendron aralioides
THA.LOC104814927 Tarenaya hassleriana
Thecc.03G198500 Theobroma cacao
Thhalv10003701m.g Eutrema salsugineum
TPR.G19373 Trifolium pratense
TWI23G0498 Tripterygium wilfordii
unitig_748.g8538 Utricularia gibba
vmacro06534 Vaccinium macrocarpon
VMungo1309G2271 Vigna mungo
Zm00001eb237090 Zea mays

User provided reference genes

Program Settings