Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00570 Brassica napus
A03p04670 Brassica napus
Aa31LG3G16360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.168 Anthoceros agrestis
Actinidia03575 Actinidia chinensis
Actinidia14148 Actinidia chinensis
Ah.11g043740 Amaranthus hybridus
Aqoxy6G02767 Aquilegia oxysepala
Aqoxy7G02538 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SPY8PK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3E7QY Arachis hypogaea
AT5G10630 Arabidopsis thaliana
ATR0665G368 Amborella trichopoda
Atru.chr7.2629 Acer truncatum
AUR62009047 Chenopodium quinoa
AUR62020615 Chenopodium quinoa
BcaB01g05511 Brassica carinata
BcaB01g05514 Brassica carinata
BcaB01g06266 Brassica carinata
BcaB01g06268 Brassica carinata
BcaB05g21493 Brassica carinata
BcaC03g13321 Brassica carinata
BolC2t06416H Brassica oleracea
BolC3t13051H Brassica oleracea
BraA02t05040Z Brassica rapa
BraA03t09807Z Brassica rapa
C02p04560 Brassica napus
C03p05380 Brassica napus
CAN.G1425.23 Capsicum annuum
CANSAT11G2600 Cannabis sativa
CARHR202670 Cardamine hirsuta
Carub.0006s0912 Capsella rubella
Ca_17873_v3 Cicer arietinum L.
CBR_g11026 Chara braunii
Cc04_g07010 Coffea canephora
CDE03G0365 Ceratophyllum demersum
Cfa013259 Carpinus fangiana
Ciclev10007529m.g Citrus clementina
CiPaw.07G213900 Carya illinoinensis
CiPaw.08G018800 Carya illinoinensis
ClCG05G017490 Citrullus lanatus
COL.COLO4_19045 Corchorus olitorius
Cpa.g.sc23.2 Carica papaya
Cre13.g565750 Chlamydomonas reinhardtii
CsaV3_3G046990 Cucumis sativus L.
CSS0007869 Camellia sinensis var. sinensis
DCAR_002123 Daucus carota
Dinv17597 Davidia involucrata
Duzib168G0370 Durio zibethinus
ECA233G5364 Erigeron canadensis
EL10Ac2g03735 Beta vulgaris
Eucgr.C04004 Eucalyptus grandis
FAN08G0164 Fragaria x ananassa
FAN08G0359 Fragaria x ananassa
FAN13G3203 Fragaria x ananassa
FAN15G1052 Fragaria x ananassa
FAN20G1379 Fragaria x ananassa
FAN27G1445 Fragaria x ananassa
FvH4_2g36930 Fragaria vesca
FvH4_2g38640 Fragaria vesca
FvH4_5g19710 Fragaria vesca
Glyma.05G163800 Glycine max
Glyma.08G121100 Glycine max
Gohir.A05G065100 Gossypium hirsutum
Gohir.A06G106400 Gossypium hirsutum
Gohir.D05G067700 Gossypium hirsutum
Gohir.D06G108600 Gossypium hirsutum
Gorai.009G068500 Gossypium raimondii
Gorai.010G123300 Gossypium raimondii
GSVIVG01015660001 Vitis vinifera
HanXRQChr12g0371811 Helianthus annuus
Haze_21719 Corylus avellana
Haze_26875 Corylus avellana
Hma1.2p1_0751F.1_g212700 Hydrangea macrophylla
HPP92_004268 Vanilla planifolia
HPP92_004269 Vanilla planifolia
HPP92_020873 Vanilla planifolia
HPP92_028114 Vanilla planifolia
Hund19401 Selenicereus undatus
Lalb_Chr12g0204821 Lupinus albus
Lj4A878G36 Lonicera japonica
Lj4g0007463 Lotus japonicus
Lsat_1_v5_gn_8_154301 Lactuca sativa
Lsat_1_v5_gn_9_45280 Lactuca sativa
Manes.03G003000 Manihot esculenta
Mapoly0066s0056 Marchantia polymorpha
MBI06_g17218_MAGBIO Magnolia biondii
MCO08G242 Micromonas commoda
MD08G1131300 Malus domestica
MD15G1109000 Malus domestica
Medtr8g087950 Medicago truncatula
MELO3C003637.2 Cucumis melo
Migut.D02069 Erythranthe guttata
MSTRG.4317 Avicennia marina
Nitab4.5_0000208g0390 Nicotiana tabacum
Nitab4.5_0001536g0070 Nicotiana tabacum
Nitab4.5_0023239g0010 Nicotiana tabacum
Nn7g38182 Nelumbo nucifera
Oeu017963.1 Olea europaea
Oeu052532.1 Olea europaea
Os01g0116600 Oryza sativa ssp. japonica
Os04g0677800 Oryza sativa ssp. japonica
Peaxi162Scf00634g00037 Petunia axillaris
Peaxi162Scf00683g00036 Petunia axillaris
PGR044G0314 Punica granatum
PGSC0003DMG400005728 Solanum tuberosum
Phvul.002G243900 Phaseolus vulgaris
Potri.006G275500 Populus trichocarpa
Potri.018G006500 Populus trichocarpa
Pp3c5_28870 Physcomitrium patens
PRCOL_00006643 Prasinoderma coloniale
Prupe.1G461200 Prunus persica
Psat7g066640 Pisum sativum
PSO675G6860 Papaver somniferum
PSO732G0431 Papaver somniferum
QL12p024915 Quercus lobata
RcHm_v2.0_Chr6g0302681 Rosa chinensis
RcHm_v2.0_Chr6g0304851 Rosa chinensis
Rhsim07G0169700 Rhododendron simsii
Sabra18G0014500 Salix brachista
SalBow8G3273 Salvia bowleyana
Sc23g0005160 Simmondsia chinensis
Sed0003669 Sechium edule
Sed0016088 Sechium edule
SEGI_04248 Sequoiadendron giganteum
SEGI_06036 Sequoiadendron giganteum
SEGI_34072 Sequoiadendron giganteum
SGA_v2.0_scaffold74G24572 Striga asiatica
SMO351G0182 Selaginella moellendorffii
Solyc03g119290.3 Solanum lycopersicum
Solyc12g036410.3 Solanum lycopersicum
Sopen03g038170 Solanum pennellii
Sopen12g016940 Solanum pennellii
Sp6g32810 Schrenkiella parvula
TAR622G1315 Trochodendron aralioides
THA.LOC104803321 Tarenaya hassleriana
THA.LOC104814967 Tarenaya hassleriana
Thecc.09G006100 Theobroma cacao
Thhalv10012906m.g Eutrema salsugineum
TPR.G6781 Trifolium pratense
TWI32G0853 Tripterygium wilfordii
TWI34G1405 Tripterygium wilfordii
unitig_21.g20433 Utricularia gibba
vmacro05110 Vaccinium macrocarpon
VMungo0251G0391 Vigna mungo
Zm00001eb066140 Zea mays
Zm00001eb430090 Zea mays

User provided reference genes

Program Settings