Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p31950 Brassica napus
A09p00090 Brassica napus
Aa31LG5G750 Aethionema arabicum
Aa31sc194G50 Aethionema arabicum
Aa31sc194G60 Aethionema arabicum
Actinidia10067 Actinidia chinensis
Actinidia10070 Actinidia chinensis
Actinidia20138 Actinidia chinensis
Actinidia20159 Actinidia chinensis
Ah.05g180180 Amaranthus hybridus
AL6G52120 Arabidopsis lyrata
Aqoxy7G00187 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea
AT4G01245 Arabidopsis thaliana
AT4G01270 Arabidopsis thaliana
ATR0661G462 Amborella trichopoda
ATR0804G028 Amborella trichopoda
ATR0804G093 Amborella trichopoda
Atru.chr5.560 Acer truncatum
Atru.chr5.577 Acer truncatum
AUR62004410 Chenopodium quinoa
AUR62022616 Chenopodium quinoa
BcaB01g02150 Brassica carinata
BcaB01g02289 Brassica carinata
BcaC01g06853 Brassica carinata
BcaC04g24137 Brassica carinata
BolC3t16169H Brassica oleracea
BolC9t53004H Brassica oleracea
BraA03t12367Z Brassica rapa
BraA09t35739Z Brassica rapa
C03p38970 Brassica napus
C09p00700 Brassica napus
CANSAT56G3669 Cannabis sativa
CARHR249040 Cardamine hirsuta
Carub.0006s3633 Capsella rubella
Ca_03421_v3 Cicer arietinum L.
Ca_03498_v3 Cicer arietinum L.
CBR_g45680 Chara braunii
Cc02_g38540 Coffea canephora
Cfa003875 Carpinus fangiana
Ciclev10019565m.g Citrus clementina
CiPaw.02G034500 Carya illinoinensis
ClCG06G003410 Citrullus lanatus
COL.COLO4_12774 Corchorus olitorius
COL.COLO4_21921 Corchorus olitorius
Cpa.g.sc184.31 Carica papaya
CsaV3_6G000900 Cucumis sativus L.
CSS0021310 Camellia sinensis var. sinensis
CSS0026327 Camellia sinensis var. sinensis
CSS0036615 Camellia sinensis var. sinensis
CSS0041346 Camellia sinensis var. sinensis
DCAR_006947 Daucus carota
Dinv32519 Davidia involucrata
Duzib138G0011 Durio zibethinus
ECA236G1242 Erigeron canadensis
EL10Ac1g00358 Beta vulgaris
Eucgr.D02323 Eucalyptus grandis
FAN01G0098 Fragaria x ananassa
FAN03G2011 Fragaria x ananassa
FAN06G2065 Fragaria x ananassa
FAN06G2774 Fragaria x ananassa
FAN10G0227 Fragaria x ananassa
FAN10G4173 Fragaria x ananassa
FAN19G0767 Fragaria x ananassa
FAN23G1626 Fragaria x ananassa
FAN26G2006 Fragaria x ananassa
FAN28G2978 Fragaria x ananassa
FvH4_1g19860 Fragaria vesca
FvH4_7g15320 Fragaria vesca
Glyma.16G032000 Glycine max
Gohir.A11G092200 Gossypium hirsutum
Gohir.D11G097000 Gossypium hirsutum
Gorai.007G103300 Gossypium raimondii
GSVIVG01013521001 Vitis vinifera
GSVIVG01026963001 Vitis vinifera
HanXRQChr04g0120761 Helianthus annuus
HanXRQChr06g0170331 Helianthus annuus
Haze_15561 Corylus avellana
Hund27243 Selenicereus undatus
Lalb_Chr10g0096671 Lupinus albus
Lalb_Chr17g0339021 Lupinus albus
Lalb_Chr17g0339031 Lupinus albus
Lj3g0008911 Lotus japonicus
Lj7A508T42 Lonicera japonica
Lsat_1_v5_gn_7_3881 Lactuca sativa
Manes.01G252600 Manihot esculenta
Mapoly0091s0017 Marchantia polymorpha
MBI04_g26968_MAGBIO Magnolia biondii
MD01G1070500 Malus domestica
MD01G1070600 Malus domestica
MD01G1071100 Malus domestica
Medtr8g028580 Medicago truncatula
MELO3C021180.2 Cucumis melo
Migut.B01796 Erythranthe guttata
MSTRG.20861 Avicennia marina
Nitab4.5_0000915g0140 Nicotiana tabacum
Nitab4.5_0002262g0080 Nicotiana tabacum
Nitab4.5_0003779g0080 Nicotiana tabacum
Nitab4.5_0009238g0010 Nicotiana tabacum
Nn1g01677 Nelumbo nucifera
Oeu063679.1 Olea europaea
Os08g0151700 Oryza sativa ssp. japonica
Peaxi162Scf00020g01410 Petunia axillaris
Peaxi162Scf00403g00830 Petunia axillaris
PGR031G1931 Punica granatum
PGSC0003DMG400000194 Solanum tuberosum
PGSC0003DMG400033881 Solanum tuberosum
Phvul.010G104100 Phaseolus vulgaris
Potri.002G164000 Populus trichocarpa
Potri.014G089800 Populus trichocarpa
Pp3c23_12760 Physcomitrium patens
Prupe.2G177000 Prunus persica
Prupe.2G177100 Prunus persica
Psat4g212240 Pisum sativum
PSO266G0021 Papaver somniferum
PSO478G3840 Papaver somniferum
PSO541G1518 Papaver somniferum
QL04p055402 Quercus lobata
QL06p033484 Quercus lobata
RcHm_v2.0_Chr1g0357651 Rosa chinensis
RcHm_v2.0_Chr2g0111671 Rosa chinensis
Rhsim07G0010800 Rhododendron simsii
Sabra14G0065300 Salix brachista
SalBow3G3455 Salvia bowleyana
Sc01g0003240 Simmondsia chinensis
Sed0003221 Sechium edule
SEGI_33633 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28804 Striga asiatica
SGA_v2.0_scaffold95G28807 Striga asiatica
SHI13366 Sapria himalayana
SHI13367 Sapria himalayana
SMO147G0044 Selaginella moellendorffii
Solyc01g095090.3 Solanum lycopersicum
Solyc05g050020.3 Solanum lycopersicum
Sopen01g038880 Solanum pennellii
Sopen05g028410 Solanum pennellii
Sp6g00860 Schrenkiella parvula
TAR374G1208 Trochodendron aralioides
THA.LOC104817038 Tarenaya hassleriana
Thecc.01G352900 Theobroma cacao
Thhalv10029490m.g Eutrema salsugineum
TPR.G28289 Trifolium pratense
TWI14G1112 Tripterygium wilfordii
unitig_699.g19806 Utricularia gibba
vmacro13232 Vaccinium macrocarpon
vmacro13233 Vaccinium macrocarpon
VMungo0331G0070 Vigna mungo
Zm00001eb416420 Zea mays

User provided reference genes

Program Settings