Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37760 Brassica napus
A09p04660 Brassica napus
Aa31LG5G17580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5635 Anthoceros agrestis
Actinidia35950 Actinidia chinensis
Actinidia39954 Actinidia chinensis
Ah.06g191400 Amaranthus hybridus
AL8G22040 Arabidopsis lyrata
Aqoxy1G00374 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AXK6HV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N94L43 Arachis hypogaea
AT5G48870 Arabidopsis thaliana
ATR0580G296 Amborella trichopoda
Atru.chr10.1425 Acer truncatum
Atru.chr8.785 Acer truncatum
AUR62033984 Chenopodium quinoa
BcaB04g19588 Brassica carinata
BcaB07g30046 Brassica carinata
BcaC03g17679 Brassica carinata
BcaC04g23758 Brassica carinata
BolC2t11755H Brassica oleracea
BolC9t53426H Brassica oleracea
BraA02t08759Z Brassica rapa
BraA09t36102Z Brassica rapa
C02p56860 Brassica napus
C09p04970 Brassica napus
CAN.G500.78 Capsicum annuum
CANSAT01G0689 Cannabis sativa
CANSAT01G1757 Cannabis sativa
CARHR182850 Cardamine hirsuta
CARHR182860 Cardamine hirsuta
Carub.0008s0859 Capsella rubella
Ca_18278_v3 Cicer arietinum L.
Cc01_g17260 Coffea canephora
CDE02G4734 Ceratophyllum demersum
CDE05G0301 Ceratophyllum demersum
Ciclev10022785m.g Citrus clementina
CiPaw.03G151500 Carya illinoinensis
CiPaw.04G107000 Carya illinoinensis
ClCG07G001790 Citrullus lanatus
COL.COLO4_37469 Corchorus olitorius
Cpa.g.sc3.67 Carica papaya
CsaV3_3G028790 Cucumis sativus L.
CSS0022478 Camellia sinensis var. sinensis
CSS0038803 Camellia sinensis var. sinensis
CSS0043203 Camellia sinensis var. sinensis
DCAR_000537 Daucus carota
DCAR_023130 Daucus carota
Dinv04668 Davidia involucrata
Dinv19219 Davidia involucrata
Duzib133G0821 Durio zibethinus
Duzib138G1451 Durio zibethinus
ECA236G1627 Erigeron canadensis
EL10Ac1g01454 Beta vulgaris
EL10Ac4g08876 Beta vulgaris
Eucgr.H03678 Eucalyptus grandis
FAN19G2048 Fragaria x ananassa
FAN23G2197 Fragaria x ananassa
FAN26G0321 Fragaria x ananassa
FAN26G0401 Fragaria x ananassa
FAN28G0422 Fragaria x ananassa
FvH4_1g24390 Fragaria vesca
Glyma.05G127900 Glycine max
Glyma.08G082700 Glycine max
Gohir.A07G155600 Gossypium hirsutum
Gohir.A11G136000 Gossypium hirsutum
Gohir.D07G162000 Gossypium hirsutum
Gohir.D11G142400 Gossypium hirsutum
Gorai.001G185300 Gossypium raimondii
Gorai.007G152700 Gossypium raimondii
GSVIVG01029076001 Vitis vinifera
HanXRQChr04g0110651 Helianthus annuus
HanXRQChr10g0287281 Helianthus annuus
HanXRQChr11g0331491 Helianthus annuus
Haze_24774 Corylus avellana
Haze_26353 Corylus avellana
Hma1.2p1_1061F.1_g253320 Hydrangea macrophylla
HPP92_006337 Vanilla planifolia
HPP92_027867 Vanilla planifolia
Hund05521 Selenicereus undatus
Lalb_Chr07g0188871 Lupinus albus
Lalb_Chr11g0067741 Lupinus albus
Lalb_Chr13g0291421 Lupinus albus
Lj4g0004779 Lotus japonicus
Lsat_1_v5_gn_8_90161 Lactuca sativa
Manes.12G042100 Manihot esculenta
Manes.13G044200 Manihot esculenta
Mapoly0016s0054 Marchantia polymorpha
MCO15G079 Micromonas commoda
MD00G1053800 Malus domestica
MD05G1178700 Malus domestica
MD10G1019300 Malus domestica
MD10G1167200 Malus domestica
Medtr4g094600 Medicago truncatula
MELO3C018062.2 Cucumis melo
Migut.D00519 Erythranthe guttata
Migut.N00343 Erythranthe guttata
Nitab4.5_0002920g0030 Nicotiana tabacum
Nitab4.5_0003904g0020 Nicotiana tabacum
Nn7g37520 Nelumbo nucifera
Oeu016707.1 Olea europaea
Os05g0389300 Oryza sativa ssp. japonica
Peaxi162Scf00047g01222 Petunia axillaris
Peaxi162Scf00122g00811 Petunia axillaris
PGR044G2430 Punica granatum
PGSC0003DMG400029651 Solanum tuberosum
Phvul.001G007400 Phaseolus vulgaris
Phvul.002G196500 Phaseolus vulgaris
Potri.001G277900 Populus trichocarpa
Potri.009G072500 Populus trichocarpa
Pp3c1_36020 Physcomitrium patens
PRCOL_00003510 Prasinoderma coloniale
Prupe.8G205100 Prunus persica
Psat7g092040 Pisum sativum
PSO210G2196 Papaver somniferum
PSO591G0020 Papaver somniferum
PSO832G2289 Papaver somniferum
QL01p002563 Quercus lobata
QL09p007931 Quercus lobata
QL09p044611 Quercus lobata
RcHm_v2.0_Chr2g0121221 Rosa chinensis
Rhsim02G0053600 Rhododendron simsii
Sabra09G0054700 Salix brachista
Sabra16G0171900 Salix brachista
SalBow3G3780 Salvia bowleyana
Sc05g0002390 Simmondsia chinensis
Sed0006654 Sechium edule
Sed0024440 Sechium edule
SEGI_22867 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04653 Striga asiatica
SMO118G0467 Selaginella moellendorffii
Solyc09g091500.3 Solanum lycopersicum
Sopen09g034430 Solanum pennellii
Sp2g19260 Schrenkiella parvula
TAR365G0710 Trochodendron aralioides
TAR636G3017 Trochodendron aralioides
THA.LOC104818942 Tarenaya hassleriana
THA.LOC104827350 Tarenaya hassleriana
Thecc.01G228800 Theobroma cacao
Thhalv10005202m.g Eutrema salsugineum
TPR.G1594 Trifolium pratense
TPR.G35576 Trifolium pratense
TPR.G4933 Trifolium pratense
TWI09G0408 Tripterygium wilfordii
TWI59G0402 Tripterygium wilfordii
unitig_22.g5302 Utricularia gibba
unitig_8.g3754 Utricularia gibba
Zm00001eb287110 Zea mays
Zm00001eb350780 Zea mays

User provided reference genes

Program Settings