Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p05040 Brassica napus
Aa31LG3G15700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2308 Anthoceros agrestis
Actinidia14661 Actinidia chinensis
Actinidia14662 Actinidia chinensis
Actinidia15728 Actinidia chinensis
Ah.10g035250 Amaranthus hybridus
AL6G22160 Arabidopsis lyrata
Aqoxy2G01296 Aquilegia oxysepala
Aqoxy7G01649 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QHEY06 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QIC87W Arachis hypogaea
AT5G11490 Arabidopsis thaliana
ATR0315G064 Amborella trichopoda
Atru.chr7.2164 Acer truncatum
AUR62009338 Chenopodium quinoa
AUR62023022 Chenopodium quinoa
BcaB01g05481 Brassica carinata
BcaB08g37054 Brassica carinata
BcaC04g19220 Brassica carinata
BolC3t13090H Brassica oleracea
BolC3t13352H Brassica oleracea
BolC9t59361H Brassica oleracea
BraA03t09838Z Brassica rapa
C03p05770 Brassica napus
C03p08480 Brassica napus
C09p65350 Brassica napus
CAN.G1175.11 Capsicum annuum
CAN.G797.6 Capsicum annuum
CAN.G797.7 Capsicum annuum
CANSAT80G0854 Cannabis sativa
CARHR201730 Cardamine hirsuta
Carub.0006s0995 Capsella rubella
Ca_15621_v3 Cicer arietinum L.
CBR_g48222 Chara braunii
Cc08_g08960 Coffea canephora
CDE02G2668 Ceratophyllum demersum
CDE04G3650 Ceratophyllum demersum
Cfa013340 Carpinus fangiana
Ciclev10007447m.g Citrus clementina
CiPaw.07G207600 Carya illinoinensis
ClCG11G013990 Citrullus lanatus
COL.COLO4_18700 Corchorus olitorius
Cpa.g.sc78.83 Carica papaya
Cre05.g234665 Chlamydomonas reinhardtii
Cre05.g234667 Chlamydomonas reinhardtii
CsaV3_3G047380 Cucumis sativus L.
CSS0042291 Camellia sinensis var. sinensis
CSS0047858 Camellia sinensis var. sinensis
DCAR_000743 Daucus carota
DCAR_004500 Daucus carota
Dinv30252 Davidia involucrata
Duzib168G2005 Durio zibethinus
Duzib187G0196 Durio zibethinus
ECA246G0078 Erigeron canadensis
EL10Ac2g04080 Beta vulgaris
Eucgr.C01579 Eucalyptus grandis
FAN15G1147 Fragaria x ananassa
FAN20G3112 Fragaria x ananassa
FAN27G1311 Fragaria x ananassa
FvH4_2g36170 Fragaria vesca
Glyma.04G080000 Glycine max
Glyma.06G081600 Glycine max
Glyma.17G203700 Glycine max
Gohir.A08G251000 Gossypium hirsutum
Gohir.D08G272500 Gossypium hirsutum
Gohir.D11G159200 Gossypium hirsutum
Gorai.004G290900 Gossypium raimondii
Gorai.011G092000 Gossypium raimondii
GSVIVG01001259001 Vitis vinifera
GSVIVG01035675001 Vitis vinifera
HanXRQChr00c0343g0573831 Helianthus annuus
HanXRQChr01g0009241 Helianthus annuus
HanXRQChr09g0259911 Helianthus annuus
Haze_21844 Corylus avellana
Hma1.2p1_1255F.1_g270620 Hydrangea macrophylla
Hma1.2p1_1255F.1_g270630 Hydrangea macrophylla
Hma1.2p1_1434F.1_g283100 Hydrangea macrophylla
Hma1.2p1_1434F.1_g283103 Hydrangea macrophylla
HPP92_019990 Vanilla planifolia
Hund03441 Selenicereus undatus
Hund19549 Selenicereus undatus
Lalb_Chr08g0243281 Lupinus albus
Lalb_Chr23g0269421 Lupinus albus
Lj1g0012670 Lotus japonicus
Lj8C604G10 Lonicera japonica
Lsat_1_v5_gn_5_45441 Lactuca sativa
Manes.16G066200 Manihot esculenta
Mapoly0060s0014 Marchantia polymorpha
MBI01_g06521_MAGBIO Magnolia biondii
MCO11G829 Micromonas commoda
MD08G1118900 Malus domestica
MD15G1098200 Malus domestica
Medtr3g109922 Medicago truncatula
MELO3C003587.2 Cucumis melo
Migut.E01510 Erythranthe guttata
MSTRG.14010 Avicennia marina
MSTRG.1653 Avicennia marina
Nitab4.5_0000052g0050 Nicotiana tabacum
Nitab4.5_0003338g0030 Nicotiana tabacum
Nn2g11730 Nelumbo nucifera
Nn8g39162 Nelumbo nucifera
Nn8g39166 Nelumbo nucifera
Nn8g39170 Nelumbo nucifera
Oeu033999.1 Olea europaea
Oeu063247.1 Olea europaea
Os01g0626100 Oryza sativa ssp. japonica
Os01g0626200 Oryza sativa ssp. japonica
Peaxi162Scf00523g00067 Petunia axillaris
PGR031G3817 Punica granatum
PGSC0003DMG400014497 Solanum tuberosum
Phvul.009G105700 Phaseolus vulgaris
Potri.006G243100 Populus trichocarpa
Pp3c9_26090 Physcomitrium patens
PRCOL_00004853 Prasinoderma coloniale
Prupe.1G453100 Prunus persica
Psat0s2458g0080 Pisum sativum
Psat0s526g0080 Pisum sativum
PSO782G2893 Papaver somniferum
PSO832G3340 Papaver somniferum
QL12p026333 Quercus lobata
RcHm_v2.0_Chr6g0305701 Rosa chinensis
Rhsim07G0153400 Rhododendron simsii
Sabra06G0190200 Salix brachista
SalBow1G3543 Salvia bowleyana
Sc09g0009060 Simmondsia chinensis
Sed0018896 Sechium edule
SEGI_28300 Sequoiadendron giganteum
SEGI_39084 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38643 Striga asiatica
SHI07750 Sapria himalayana
SMO259G0016 Selaginella moellendorffii
Solyc08g068210.3 Solanum lycopersicum
Sopen08g022070 Solanum pennellii
Sp6g32110 Schrenkiella parvula
TAR383G0857 Trochodendron aralioides
TAR626G0957 Trochodendron aralioides
THA.LOC104799206 Tarenaya hassleriana
Thecc.09G039400 Theobroma cacao
Thhalv10012680m.g Eutrema salsugineum
TPR.G1337 Trifolium pratense
TPR.G29968 Trifolium pratense
TWI34G1998 Tripterygium wilfordii
TWI63G1177 Tripterygium wilfordii
unitig_85.g27156 Utricularia gibba
vmacro05359 Vaccinium macrocarpon
VMungo1309G1162 Vigna mungo
Zm00001eb159350 Zea mays
Zm00001eb358720 Zea mays

User provided reference genes

Program Settings