Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p20950 Brassica napus
A09p14260 Brassica napus
Aa31LG9G320 Aethionema arabicum
Actinidia01391 Actinidia chinensis
Ah.12g052340 Amaranthus hybridus
AL2G10550 Arabidopsis lyrata
AL7G47430 Arabidopsis lyrata
Aqoxy5G04131 Aquilegia oxysepala
AT1G64340 Arabidopsis thaliana
AT5G41810 Arabidopsis thaliana
ATR0589G111 Amborella trichopoda
Atru.chr2.764 Acer truncatum
Atru.chr9.2028 Acer truncatum
Atru.chr9.2036 Acer truncatum
AUR62010816 Chenopodium quinoa
AUR62019816 Chenopodium quinoa
BcaB02g07876 Brassica carinata
BcaB07g31512 Brassica carinata
BcaC04g22629 Brassica carinata
BcaC08g44558 Brassica carinata
BolC6t37205H Brassica oleracea
BolC9t54617H Brassica oleracea
BraA07t29781Z Brassica rapa
BraA09t37075Z Brassica rapa
C06p20240 Brassica napus
C09p17190 Brassica napus
CANSAT21G0143 Cannabis sativa
CARHR212760 Cardamine hirsuta
Carub.0002s0046 Capsella rubella
Carub.0007s3356 Capsella rubella
Ca_17490_v3 Cicer arietinum L.
Cc08_g15850 Coffea canephora
Cfa012825 Carpinus fangiana
Ciclev10022492m.g Citrus clementina
CiPaw.11G123200 Carya illinoinensis
ClCG01G001990 Citrullus lanatus
ClCG01G011510 Citrullus lanatus
ClCG05G010200 Citrullus lanatus
ClCG07G009600 Citrullus lanatus
ClCG07G014930 Citrullus lanatus
ClCG10G009270 Citrullus lanatus
COL.COLO4_21708 Corchorus olitorius
Cpa.g.sc775.1 Carica papaya
CsaV3_4G006460 Cucumis sativus L.
CsaV3_5G002120 Cucumis sativus L.
CSS0001263 Camellia sinensis var. sinensis
CSS0014692 Camellia sinensis var. sinensis
CSS0015607 Camellia sinensis var. sinensis
CSS0022093 Camellia sinensis var. sinensis
CSS0044305 Camellia sinensis var. sinensis
CSS0044713 Camellia sinensis var. sinensis
DCAR_027715 Daucus carota
Dinv37546 Davidia involucrata
Dinv38852 Davidia involucrata
Duzib068G0822 Durio zibethinus
Duzib084G0720 Durio zibethinus
ECA233G6185 Erigeron canadensis
ECA240G3705 Erigeron canadensis
EL10Ac5g12894 Beta vulgaris
Eucgr.D01714 Eucalyptus grandis
FAN04G1712 Fragaria x ananassa
FAN04G3134 Fragaria x ananassa
FAN13G1208 Fragaria x ananassa
FAN18G0263 Fragaria x ananassa
FAN18G2980 Fragaria x ananassa
FvH4_5g04150 Fragaria vesca
Glyma.01G224600 Glycine max
Glyma.05G215700 Glycine max
Glyma.08G021800 Glycine max
Glyma.11G018400 Glycine max
Gohir.A02G102000 Gossypium hirsutum
Gohir.A08G085100 Gossypium hirsutum
Gohir.A11G024100 Gossypium hirsutum
Gohir.A12G235100 Gossypium hirsutum
Gohir.D03G082400 Gossypium hirsutum
Gohir.D08G132000 Gossypium hirsutum
Gohir.D12G236200 Gossypium hirsutum
Gorai.003G081300 Gossypium raimondii
Gorai.004G134900 Gossypium raimondii
Gorai.008G253000 Gossypium raimondii
HanXRQChr03g0085171 Helianthus annuus
HanXRQChr07g0191041 Helianthus annuus
Haze_08651 Corylus avellana
Haze_08652 Corylus avellana
Hma1.2p1_0359F.1_g135340 Hydrangea macrophylla
Lalb_Chr05g0211621 Lupinus albus
Lalb_Chr05g0224201 Lupinus albus
Lj4g0012980 Lotus japonicus
LjContig00312_ERROPOS870357g0014674 Lotus japonicus
Lsat_1_v5_gn_6_11781 Lactuca sativa
Lsat_1_v5_gn_6_85661 Lactuca sativa
Manes.01G045300 Manihot esculenta
Manes.02G011900 Manihot esculenta
Manes.02G012001 Manihot esculenta
MBI06_g32753_MAGBIO Magnolia biondii
MBI07_g24340_MAGBIO Magnolia biondii
MD06G1103200 Malus domestica
MD14G1122100 Malus domestica
Medtr5g009490 Medicago truncatula
Medtr8g099340 Medicago truncatula
MELO3C005742.2 Cucumis melo
MELO3C016304.2 Cucumis melo
MSTRG.13880 Avicennia marina
Nitab4.5_0007099g0020 Nicotiana tabacum
Nn1g01823 Nelumbo nucifera
Nn3g19068 Nelumbo nucifera
Oeu061095.1 Olea europaea
Os06g0525200 Oryza sativa ssp. japonica
Peaxi162Scf00074g01119 Petunia axillaris
Peaxi162Scf00117g00128 Petunia axillaris
PGR031G0908 Punica granatum
PGR042G1559 Punica granatum
PGSC0003DMG400012296 Solanum tuberosum
Phvul.002G163200 Phaseolus vulgaris
Phvul.002G296900 Phaseolus vulgaris
Potri.001G093500 Populus trichocarpa
Prupe.5G116000 Prunus persica
Psat0s4474g0040 Pisum sativum
Psat7g027080 Pisum sativum
PSO724G0350 Papaver somniferum
PSO724G0798 Papaver somniferum
PSO724G1125 Papaver somniferum
PSO729G0067 Papaver somniferum
QL02p031286 Quercus lobata
RcHm_v2.0_Chr7g0195351 Rosa chinensis
Rhsim02G0241500 Rhododendron simsii
Rhsim02G0241600 Rhododendron simsii
Rhsim07G0083400 Rhododendron simsii
SalBow1G1740 Salvia bowleyana
SalBow1G2562 Salvia bowleyana
Sc01g0010170 Simmondsia chinensis
Sc22g0005120 Simmondsia chinensis
Sed0010968 Sechium edule
Sed0013874 Sechium edule
Sed0017945 Sechium edule
SGA_v2.0_scaffold111G31421 Striga asiatica
SGA_v2.0_scaffold173G39083 Striga asiatica
Solyc08g082090.1 Solanum lycopersicum
Sopen08g030380 Solanum pennellii
Sp2g00420 Schrenkiella parvula
Sp7g00270 Schrenkiella parvula
TAR629G3139 Trochodendron aralioides
THA.LOC104809339 Tarenaya hassleriana
Thecc.03G294000 Theobroma cacao
Thhalv10023644m.g Eutrema salsugineum
TPR.G6668 Trifolium pratense
TWI15G0537 Tripterygium wilfordii
TWI81G0332 Tripterygium wilfordii
VMungo0251G1458 Vigna mungo
Zm00001eb382950 Zea mays

User provided reference genes

Program Settings