Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03550 Brassica napus
A03p07800 Brassica napus
A05p44330 Brassica napus
A10p22730 Brassica napus
Aa31LG11G13190 Aethionema arabicum
Aa31LG5G13260 Aethionema arabicum
Actinidia38902 Actinidia chinensis
Ah.06g195490 Amaranthus hybridus
AL3G12200 Arabidopsis lyrata
AL6G27410 Arabidopsis lyrata
Aqoxy7G00303 Aquilegia oxysepala
AT3G02790 Arabidopsis thaliana
AT5G16470 Arabidopsis thaliana
ATR0568G125 Amborella trichopoda
Atru.chr12.1788 Acer truncatum
AUR62000312 Chenopodium quinoa
AUR62006656 Chenopodium quinoa
AUR62006657 Chenopodium quinoa
BcaB01g04980 Brassica carinata
BcaB08g36850 Brassica carinata
BcaB08g36851 Brassica carinata
BcaC03g18492 Brassica carinata
BcaC04g18876 Brassica carinata
BcaC05g30507 Brassica carinata
BcaC05g30510 Brassica carinata
BolC2t06754H Brassica oleracea
BolC3t13398H Brassica oleracea
BolC5t35066H Brassica oleracea
BolC9t58902H Brassica oleracea
BraA02t05326Z Brassica rapa
BraA03t10107Z Brassica rapa
BraA06t23289Z Brassica rapa
BraA10t44336Z Brassica rapa
C09p60710 Brassica napus
C09p75910 Brassica napus
CAN.G217.12 Capsicum annuum
CANSAT35G0417 Cannabis sativa
CANSAT54G1839 Cannabis sativa
CARHR076800 Cardamine hirsuta
CARHR196760 Cardamine hirsuta
Carub.0003s0189 Capsella rubella
Carub.0006s1467 Capsella rubella
Ca_07986_v3 Cicer arietinum L.
Cc09_g03620 Coffea canephora
CDE12G0839 Ceratophyllum demersum
Cfa006265 Carpinus fangiana
Ciclev10013411m.g Citrus clementina
CiPaw.07G080000 Carya illinoinensis
ClCG03G010710 Citrullus lanatus
COL.COLO4_19821 Corchorus olitorius
Cpa.g.sc39.7 Carica papaya
Cre09.g416500 Chlamydomonas reinhardtii
CsaV3_1G044540 Cucumis sativus L.
CSS0011817 Camellia sinensis var. sinensis
CSS0045397 Camellia sinensis var. sinensis
DCAR_024584 Daucus carota
DCAR_029983 Daucus carota
Dinv29105 Davidia involucrata
Duzib128G0817 Durio zibethinus
Duzib177G0866 Durio zibethinus
ECA233G5366 Erigeron canadensis
ECA238G2179 Erigeron canadensis
EL10Ac4g09966 Beta vulgaris
Eucgr.H01388 Eucalyptus grandis
FAN05G4796 Fragaria x ananassa
FAN09G3430 Fragaria x ananassa
FAN14G1059 Fragaria x ananassa
FvH4_6g00510 Fragaria vesca
Glyma.09G250600 Glycine max
Glyma.18G241900 Glycine max
Gohir.A05G391600 Gossypium hirsutum
Gohir.A08G225000 Gossypium hirsutum
Gohir.A13G154200 Gossypium hirsutum
Gohir.D04G025700 Gossypium hirsutum
Gohir.D08G245400 Gossypium hirsutum
Gohir.D13G158900 Gossypium hirsutum
Gorai.004G261900 Gossypium raimondii
Gorai.012G028300 Gossypium raimondii
Gorai.013G179600 Gossypium raimondii
GSVIVG01019111001 Vitis vinifera
HanXRQChr09g0244001 Helianthus annuus
HanXRQChr11g0333601 Helianthus annuus
Haze_04552 Corylus avellana
Hma1.2p1_0171F.1_g075510 Hydrangea macrophylla
HPP92_025926 Vanilla planifolia
Lalb_Chr01g0020391 Lupinus albus
Lalb_Chr03g0038491 Lupinus albus
Lj1g0018632 Lotus japonicus
Lsat_1_v5_gn_2_18260 Lactuca sativa
Lsat_1_v5_gn_8_2360 Lactuca sativa
Manes.12G005900 Manihot esculenta
Manes.13G005600 Manihot esculenta
Mapoly0153s0037 Marchantia polymorpha
MBI18_g38869_MAGBIO Magnolia biondii
MD04G1244600 Malus domestica
MD12G1260500 Malus domestica
Medtr7g079990 Medicago truncatula
MELO3C010059.2 Cucumis melo
Migut.F02136 Erythranthe guttata
Nitab4.5_0000083g0160 Nicotiana tabacum
Nitab4.5_0001435g0020 Nicotiana tabacum
Nn1g01054 Nelumbo nucifera
Nn1g09361 Nelumbo nucifera
Nn7g37400 Nelumbo nucifera
Oeu020252.1 Olea europaea
Oeu062049.1 Olea europaea
Os06g0708600 Oryza sativa ssp. japonica
Peaxi162Scf00344g00092 Petunia axillaris
PGR031G2676 Punica granatum
PGSC0003DMG400007259 Solanum tuberosum
Phvul.008G054200 Phaseolus vulgaris
Potri.013G086400 Populus trichocarpa
Potri.019G053500 Populus trichocarpa
Pp3c15_1090 Physcomitrium patens
Pp3c26_1250 Physcomitrium patens
Pp3c9_1130 Physcomitrium patens
PRCOL_00002520 Prasinoderma coloniale
Prupe.6G361200 Prunus persica
Psat3g138280 Pisum sativum
PSO675G0300 Papaver somniferum
PSO675G8596 Papaver somniferum
QL01p048380 Quercus lobata
RcHm_v2.0_Chr1g0316641 Rosa chinensis
RcHm_v2.0_Chr3g0447891 Rosa chinensis
Rhsim09G0129900 Rhododendron simsii
Sabra13G0077700 Salix brachista
SalBow6G1022 Salvia bowleyana
Sc06g0005050 Simmondsia chinensis
Sc16g0010390 Simmondsia chinensis
Sed0011478 Sechium edule
SEGI_19955 Sequoiadendron giganteum
SHI07073 Sapria himalayana
SHI13720 Sapria himalayana
SHI22764 Sapria himalayana
SMO361G0285 Selaginella moellendorffii
Solyc04g056350.1 Solanum lycopersicum
Sopen04g025250 Solanum pennellii
Sp3g01820 Schrenkiella parvula
Sp6g27710 Schrenkiella parvula
TAR629G2726 Trochodendron aralioides
THA.LOC104802953 Tarenaya hassleriana
THA.LOC104827174 Tarenaya hassleriana
Thecc.05G199300 Theobroma cacao
Thhalv10015095m.g Eutrema salsugineum
TPR.G30708 Trifolium pratense
TWI18G1000 Tripterygium wilfordii
TWI36G0708 Tripterygium wilfordii
unitig_749.g13492 Utricularia gibba
VMungo0464G0653 Vigna mungo
VMungo1383G1359 Vigna mungo
Zm00001eb227470 Zea mays
Zm00001eb272650 Zea mays

User provided reference genes

Program Settings