Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p46370 Brassica napus
A10p28450 Brassica napus
Aa31LG11G2630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1079 Anthoceros agrestis
Actinidia13712 Actinidia chinensis
Actinidia38414 Actinidia chinensis
Ah.01g001510 Amaranthus hybridus
AL6G34330 Arabidopsis lyrata
Aqoxy3G04254 Aquilegia oxysepala
Aqoxy4G00267 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I14ERJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JE56K8 Arachis hypogaea
AT5G23140 Arabidopsis thaliana
ATR0618G285 Amborella trichopoda
Atru.chr11.1122 Acer truncatum
AUR62015237 Chenopodium quinoa
AUR62017699 Chenopodium quinoa
BcaB08g37274 Brassica carinata
BolC7t44961H Brassica oleracea
BolC9t59619H Brassica oleracea
BraA03t13763Z Brassica rapa
BraA10t44893Z Brassica rapa
C07p44390 Brassica napus
C09p68720 Brassica napus
CAN.G157.30 Capsicum annuum
CAN.G619.42 Capsicum annuum
CAN.G942.1 Capsicum annuum
CANSAT56G2159 Cannabis sativa
CARHR190390 Cardamine hirsuta
CARHR204940 Cardamine hirsuta
Carub.0006s2093 Capsella rubella
Ca_19018_v3 Cicer arietinum L.
CBR_g24278 Chara braunii
Cc11_g02360 Coffea canephora
CDE02G2514 Ceratophyllum demersum
CDE10G0099 Ceratophyllum demersum
Cfa008742 Carpinus fangiana
Ciclev10032560m.g Citrus clementina
CiPaw.05G169200 Carya illinoinensis
ClCG10G011980 Citrullus lanatus
COL.COLO4_19600 Corchorus olitorius
Cpa.g.sc0.141 Carica papaya
Cre12.g521450 Chlamydomonas reinhardtii
CsaV3_3G031380 Cucumis sativus L.
CSS0032191 Camellia sinensis var. sinensis
DCAR_023458 Daucus carota
DCAR_026898 Daucus carota
Dinv11722 Davidia involucrata
Dinv17614 Davidia involucrata
Duzib052G0407 Durio zibethinus
Duzib132G0023 Durio zibethinus
ECA058G0001 Erigeron canadensis
ECA233G2349 Erigeron canadensis
ECA246G4736 Erigeron canadensis
EL10Ac9g22951 Beta vulgaris
Eucgr.G02574 Eucalyptus grandis
FAN07G1231 Fragaria x ananassa
FAN09G4890 Fragaria x ananassa
FAN12G2669 Fragaria x ananassa
FAN17G2737 Fragaria x ananassa
FvH4_4g36920 Fragaria vesca
Glyma.11G100300 Glycine max
Glyma.12G026400 Glycine max
Gohir.A12G133700 Gossypium hirsutum
Gohir.A13G060200 Gossypium hirsutum
Gohir.D12G137200 Gossypium hirsutum
Gohir.D13G061700 Gossypium hirsutum
Gorai.008G148500 Gossypium raimondii
Gorai.013G070200 Gossypium raimondii
GSVIVG01012051001 Vitis vinifera
HanXRQChr06g0171541 Helianthus annuus
HanXRQChr13g0387761 Helianthus annuus
Haze_11758 Corylus avellana
Haze_26735 Corylus avellana
Hma1.2p1_0044F.1_g026140 Hydrangea macrophylla
HPP92_008571 Vanilla planifolia
Lalb_Chr01g0001421 Lupinus albus
Lj3A849T47 Lonicera japonica
Lj3g0026157 Lotus japonicus
Lj6C718G2 Lonicera japonica
Lsat_1_v5_gn_3_35380 Lactuca sativa
Lsat_1_v5_gn_8_33520 Lactuca sativa
Manes.04G061400 Manihot esculenta
Manes.11G107700 Manihot esculenta
Mapoly0010s0007 Marchantia polymorpha
MBI03_g09363_MAGBIO Magnolia biondii
MCO14G277 Micromonas commoda
MD13G1005300 Malus domestica
MD13G1005500 Malus domestica
MD16G1002600 Malus domestica
Medtr4g075100 Medicago truncatula
MELO3C024021.2 Cucumis melo
Migut.E00573 Erythranthe guttata
Migut.E00598 Erythranthe guttata
MSTRG.13685 Avicennia marina
MSTRG.2061 Avicennia marina
Nitab4.5_0000405g0090 Nicotiana tabacum
Nitab4.5_0000771g0060 Nicotiana tabacum
Nitab4.5_0002132g0030 Nicotiana tabacum
Nitab4.5_0005356g0030 Nicotiana tabacum
Nn4g24954 Nelumbo nucifera
Nn4g24955 Nelumbo nucifera
Oeu027917.1 Olea europaea
Os02g0634500 Oryza sativa ssp. japonica
Os04g0525600 Oryza sativa ssp. japonica
Peaxi162Scf00079g01814 Petunia axillaris
PGR142G1944 Punica granatum
PGSC0003DMG400032562 Solanum tuberosum
PGSC0003DMG402010580 Solanum tuberosum
Phvul.011G029300 Phaseolus vulgaris
Potri.005G092600 Populus trichocarpa
Potri.007G071700 Populus trichocarpa
Pp3c4_31230 Physcomitrium patens
Prupe.1G347500 Prunus persica
Psat7g138120 Pisum sativum
QL03p035868 Quercus lobata
QL03p046459 Quercus lobata
RcHm_v2.0_Chr4g0446681 Rosa chinensis
Rhsim04G0166700 Rhododendron simsii
Rhsim04G0166800 Rhododendron simsii
Rhsim04G0166900 Rhododendron simsii
Rhsim04G0167000 Rhododendron simsii
Rhsim04G0167100 Rhododendron simsii
Rhsim04G0167200 Rhododendron simsii
Sabra05G0076700 Salix brachista
Sabra07G0060400 Salix brachista
SalBow3G1982 Salvia bowleyana
Sc17g0004130 Simmondsia chinensis
Sed0015389 Sechium edule
SEGI_24498 Sequoiadendron giganteum
SGA_v2.0_scaffold65G22158 Striga asiatica
SMO228G0066 Selaginella moellendorffii
Solyc04g009310.4 Solanum lycopersicum
Sopen04g004430 Solanum pennellii
Sp2g23980 Schrenkiella parvula
Sp6g34720 Schrenkiella parvula
TAR371G1024 Trochodendron aralioides
TAR629G2724 Trochodendron aralioides
THA.LOC104800888 Tarenaya hassleriana
THA.LOC104818372 Tarenaya hassleriana
Thecc.02G160000 Theobroma cacao
Thhalv10004843m.g Eutrema salsugineum
Thhalv10014542m.g Eutrema salsugineum
TPR.G32332 Trifolium pratense
TWI74G0936 Tripterygium wilfordii
TWI77G0920 Tripterygium wilfordii
vmacro08598 Vaccinium macrocarpon
VMungo1127G1635 Vigna mungo
Zm00001eb076840 Zea mays
Zm00001eb185450 Zea mays
Zm00001eb248150 Zea mays
Zm00001eb426970 Zea mays

User provided reference genes

Program Settings