Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40820 Brassica napus
A02p38380 Brassica napus
A06p37960 Brassica napus
Aa31LG11G8690 Aethionema arabicum
Actinidia03301 Actinidia chinensis
Ah.06g191960 Amaranthus hybridus
AL3G14610 Arabidopsis lyrata
AL6G40600 Arabidopsis lyrata
Aqoxy2G03604 Aquilegia oxysepala
Aqoxy5G00286 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CSXK13 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RHY2RN Arachis hypogaea
AT3G04590 Arabidopsis thaliana
AT5G28590 Arabidopsis thaliana
ATR0686G041 Amborella trichopoda
Atru.chr2.888 Acer truncatum
AUR62001082 Chenopodium quinoa
AUR62004878 Chenopodium quinoa
BcaB04g21363 Brassica carinata
BcaB07g34179 Brassica carinata
BcaC03g17757 Brassica carinata
BcaC09g47792 Brassica carinata
BcaNung01727 Brassica carinata
BcaNung02094 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p00890 Brassica napus
BolC2t11843H Brassica oleracea
BolC4t25335H Brassica oleracea
BolC7t44566H Brassica oleracea
BraA01t04518Z Brassica rapa
BraA02t08817Z Brassica rapa
BraA06t26712Z Brassica rapa
C02p57710 Brassica napus
C04p37650 Brassica napus
C07p40320 Brassica napus
CAN.G1256.7 Capsicum annuum
CANSAT54G1046 Cannabis sativa
CARHR078770 Cardamine hirsuta
CARHR185160 Cardamine hirsuta
Carub.0003s0374 Capsella rubella
Ca_09467_v3 Cicer arietinum L.
Ca_09997_v3 Cicer arietinum L.
Cc02_g09080 Coffea canephora
Cfa006321 Carpinus fangiana
Ciclev10020621m.g Citrus clementina
CiPaw.07G077500 Carya illinoinensis
ClCG02G016970 Citrullus lanatus
COL.COLO4_15418 Corchorus olitorius
Cpa.g.sc2388.1 Carica papaya
CsaV3_2G003780 Cucumis sativus L.
DCAR_002176 Daucus carota
Dinv06986 Davidia involucrata
Dinv14626 Davidia involucrata
Duzib106G1330 Durio zibethinus
Duzib128G0176 Durio zibethinus
Duzib177G0901 Durio zibethinus
ECA233G1450 Erigeron canadensis
ECA238G1098 Erigeron canadensis
EL10Ac4g09054 Beta vulgaris
Eucgr.B02133 Eucalyptus grandis
FAN02G0587 Fragaria x ananassa
FAN05G2432 Fragaria x ananassa
FAN05G4466 Fragaria x ananassa
FAN09G3959 Fragaria x ananassa
FAN14G2838 Fragaria x ananassa
FAN14G5054 Fragaria x ananassa
FvH4_6g02360 Fragaria vesca
Glyma.03G251800 Glycine max
Glyma.19G249200 Glycine max
Gohir.A11G250900 Gossypium hirsutum
Gohir.A11G299100 Gossypium hirsutum
Gohir.A13G168800 Gossypium hirsutum
Gohir.D11G261400 Gossypium hirsutum
Gohir.D11G313900 Gossypium hirsutum
Gohir.D13G174200 Gossypium hirsutum
Gorai.007G280000 Gossypium raimondii
Gorai.007G345200 Gossypium raimondii
Gorai.013G186600 Gossypium raimondii
GSVIVG01036214001 Vitis vinifera
HanXRQChr11g0322831 Helianthus annuus
HanXRQChr14g0455611 Helianthus annuus
HanXRQChr14g0455651 Helianthus annuus
Haze_04468 Corylus avellana
Haze_04469 Corylus avellana
Hma1.2p1_1181F.1_g264740 Hydrangea macrophylla
HPP92_020243 Vanilla planifolia
Hund06938 Selenicereus undatus
Lalb_Chr02g0149231 Lupinus albus
Lalb_Chr06g0168361 Lupinus albus
Lalb_Chr21g0311281 Lupinus albus
Lj1g0020846 Lotus japonicus
Lj5g0008230 Lotus japonicus
Lsat_1_v5_gn_2_107660 Lactuca sativa
Lsat_1_v5_gn_8_2600 Lactuca sativa
Manes.08G137200 Manihot esculenta
Manes.09G149800 Manihot esculenta
MBI07_g36335_MAGBIO Magnolia biondii
MBI18_g33708_MAGBIO Magnolia biondii
MD00G1114400 Malus domestica
MD12G1245000 Malus domestica
Medtr1g079780 Medicago truncatula
Medtr7g116320 Medicago truncatula
MELO3C004418.2 Cucumis melo
Nitab4.5_0000856g0220 Nicotiana tabacum
Nitab4.5_0007977g0010 Nicotiana tabacum
Nn1g02678 Nelumbo nucifera
Nn3g19589 Nelumbo nucifera
Oeu025624.1 Olea europaea
Oeu025625.1 Olea europaea
Oeu033251.3 Olea europaea
Oeu037759.1 Olea europaea
Oeu052599.1 Olea europaea
Peaxi162Scf00120g00519 Petunia axillaris
PGR142G3579 Punica granatum
PGSC0003DMG400028695 Solanum tuberosum
Phvul.006G106500 Phaseolus vulgaris
Potri.013G044000 Populus trichocarpa
Potri.019G014200 Populus trichocarpa
Prupe.6G347600 Prunus persica
Psat3g006000 Pisum sativum
Psat6g142280 Pisum sativum
PSO210G2937 Papaver somniferum
PSO832G1283 Papaver somniferum
QL01p041990 Quercus lobata
QL03p032157 Quercus lobata
QL03p032307 Quercus lobata
RcHm_v2.0_Chr3g0450121 Rosa chinensis
Sabra13G0040700 Salix brachista
Sabra19G0016200 Salix brachista
Sabra19G0026900 Salix brachista
Sc09g0004110 Simmondsia chinensis
Sc20g0000510 Simmondsia chinensis
Sed0011974 Sechium edule
Sed0020420 Sechium edule
SHI31404 Sapria himalayana
Solyc11g006190.3 Solanum lycopersicum
Sopen11g002120 Solanum pennellii
Sp2g20150 Schrenkiella parvula
Sp3g03430 Schrenkiella parvula
TAR362G0480 Trochodendron aralioides
TAR365G0157 Trochodendron aralioides
TAR633G2065 Trochodendron aralioides
TAR636G0791 Trochodendron aralioides
THA.LOC104802836 Tarenaya hassleriana
THA.LOC104827291 Tarenaya hassleriana
Thecc.05G276700 Theobroma cacao
Thhalv10004435m.g Eutrema salsugineum
Thhalv10020867m.g Eutrema salsugineum
TPR.G10260 Trifolium pratense
TPR.G7000 Trifolium pratense
TWI56G0965 Tripterygium wilfordii
vmacro10350 Vaccinium macrocarpon
VMungo0540G2126 Vigna mungo

User provided reference genes

Program Settings