Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p26580 Brassica napus
A05p13030 Brassica napus
Aa31LG4G14110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5408 Anthoceros agrestis
Actinidia03704 Actinidia chinensis
Actinidia03705 Actinidia chinensis
Actinidia14011 Actinidia chinensis
Actinidia20436 Actinidia chinensis
AL5G23500 Arabidopsis lyrata
AL5G23530 Arabidopsis lyrata
Aqoxy2G01783 Aquilegia oxysepala
Aqoxy3G00574 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea
AT3G45040 Arabidopsis thaliana
ATR1132G031 Amborella trichopoda
Atru.chr3.3551 Acer truncatum
Atru.chr3.3552 Acer truncatum
Atru.chr3.3553 Acer truncatum
AUR62014926 Chenopodium quinoa
AUR62029209 Chenopodium quinoa
BcaB05g23422 Brassica carinata
BcaC02g11340 Brassica carinata
BcaC09g49697 Brassica carinata
BcaNung05690 Brassica carinata
BcaNung05691 Brassica carinata
BolC1t03347H Brassica oleracea
BolC4t23289H Brassica oleracea
BraA01t02588Z Brassica rapa
BraA05t20243Z Brassica rapa
C01p33820 Brassica napus
C04p17380 Brassica napus
CAN.G1755.5 Capsicum annuum
CANSAT54G2950 Cannabis sativa
CARHR150930 Cardamine hirsuta
Carub.0005s1082 Capsella rubella
Ca_01994_v3 Cicer arietinum L.
Cc01_g10560 Coffea canephora
CDE06G1539 Ceratophyllum demersum
Cfa010344 Carpinus fangiana
Cfa026928 Carpinus fangiana
Ciclev10028099m.g Citrus clementina
CiPaw.13G118600 Carya illinoinensis
ClCG03G002670 Citrullus lanatus
COL.COLO4_34701 Corchorus olitorius
Cpa.g.sc1.24 Carica papaya
Cpa.g.sc1.25 Carica papaya
Cre06.g277700 Chlamydomonas reinhardtii
CsaV3_1G013400 Cucumis sativus L.
CSS0005795 Camellia sinensis var. sinensis
CSS0042525 Camellia sinensis var. sinensis
DCAR_006106 Daucus carota
Duzib168G1494 Durio zibethinus
Duzib170G0082 Durio zibethinus
ECA248G3913 Erigeron canadensis
EL10Ac9g22573 Beta vulgaris
Eucgr.B02538 Eucalyptus grandis
FAN05G3839 Fragaria x ananassa
FAN07G0780 Fragaria x ananassa
FAN10G3619 Fragaria x ananassa
FAN19G0403 Fragaria x ananassa
FAN23G0725 Fragaria x ananassa
FAN23G0844 Fragaria x ananassa
FAN26G3463 Fragaria x ananassa
FAN27G1933 Fragaria x ananassa
FAN28G2552 Fragaria x ananassa
FvH4_1g24650 Fragaria vesca
Glyma.12G177300 Glycine max
Glyma.13G323400 Glycine max
Gohir.1Z049525 Gossypium hirsutum
Gohir.A03G030900 Gossypium hirsutum
Gohir.A03G030950 Gossypium hirsutum
Gohir.A13G232250 Gossypium hirsutum
Gohir.D03G137500 Gossypium hirsutum
Gohir.D13G237900 Gossypium hirsutum
Gorai.003G144600 Gossypium raimondii
Gorai.013G268700 Gossypium raimondii
GSVIVG01031509001 Vitis vinifera
HanXRQChr11g0346181 Helianthus annuus
Haze_23751 Corylus avellana
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla
HPP92_025805 Vanilla planifolia
Hund01475 Selenicereus undatus
Lalb_Chr03g0027621 Lupinus albus
Lj1A206T59 Lonicera japonica
Lj3g0025221 Lotus japonicus
Lsat_1_v5_gn_1_63021 Lactuca sativa
Manes.04G015500 Manihot esculenta
Manes.11G150502 Manihot esculenta
Mapoly0124s0030 Marchantia polymorpha
MBI18_g10191_MAGBIO Magnolia biondii
MBI18_g20776_MAGBIO Magnolia biondii
MBI18_g43296_MAGBIO Magnolia biondii
MCO11G119 Micromonas commoda
MD00G1033800 Malus domestica
MD00G1033900 Malus domestica
MD00G1165500 Malus domestica
MD03G1126100 Malus domestica
MD11G1145200 Malus domestica
Medtr2g095420 Medicago truncatula
MELO3C035466.2 Cucumis melo
Migut.N02573 Erythranthe guttata
MSTRG.17776 Avicennia marina
Nitab4.5_0000106g0400 Nicotiana tabacum
Nitab4.5_0006015g0020 Nicotiana tabacum
Nn2g11574 Nelumbo nucifera
Oeu018486.2 Olea europaea
Oeu029897.2 Olea europaea
Os02g0142250 Oryza sativa ssp. japonica
Os02g0146500 Oryza sativa ssp. japonica
Peaxi162Scf00351g00526 Petunia axillaris
Peaxi162Scf01159g00227 Petunia axillaris
PGR094G0002 Punica granatum
PGR094G0004 Punica granatum
PGR102G1642 Punica granatum
PGSC0003DMG400007163 Solanum tuberosum
Phvul.005G131900 Phaseolus vulgaris
Potri.009G007900 Populus trichocarpa
Pp3c13_8200 Physcomitrium patens
PRCOL_00000088 Prasinoderma coloniale
Prupe.6G108100 Prunus persica
Psat0s3241g0040 Pisum sativum
PSO063G2354 Papaver somniferum
PSO339G3038 Papaver somniferum
PSO339G3219 Papaver somniferum
PSO801G0074 Papaver somniferum
QL01p015865 Quercus lobata
RcHm_v2.0_Chr2g0122071 Rosa chinensis
Rhsim01G0212300 Rhododendron simsii
Sabra09G0004700 Salix brachista
SalBow3G4083 Salvia bowleyana
Sc05g0005060 Simmondsia chinensis
Sed0027733 Sechium edule
SEGI_23621 Sequoiadendron giganteum
SEGI_33157 Sequoiadendron giganteum
SGA_v2.0_scaffold116G32209 Striga asiatica
Solyc06g074960.4 Solanum lycopersicum
Sopen06g031360 Solanum pennellii
Sp5g16230 Schrenkiella parvula
TAR623G0387 Trochodendron aralioides
THA.LOC104799516 Tarenaya hassleriana
Thecc.09G348100 Theobroma cacao
Thhalv10002461m.g Eutrema salsugineum
TPR.G11629 Trifolium pratense
TWI31G0757 Tripterygium wilfordii
TWI79G1687 Tripterygium wilfordii
unitig_8.g3670 Utricularia gibba
vmacro14409 Vaccinium macrocarpon
Zm00001eb021960 Zea mays
Zm00001eb232190 Zea mays

User provided reference genes

Program Settings