Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22110 Brassica napus
A07p43570 Brassica napus
Aa31LG4G8280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4998 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5001 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5005 Anthoceros agrestis
Actinidia10338 Actinidia chinensis
Actinidia10339 Actinidia chinensis
Actinidia30789 Actinidia chinensis
Ah.05g169750 Amaranthus hybridus
AL2G38630 Arabidopsis lyrata
Aqoxy6G00731 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H9D2WH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y876JP Arachis hypogaea
AT1G78280 Arabidopsis thaliana
ATR0782G122 Amborella trichopoda
Atru.chr13.1133 Acer truncatum
Atru.chr13.1134 Acer truncatum
AUR62018953 Chenopodium quinoa
AUR62027799 Chenopodium quinoa
BcaB03g16003 Brassica carinata
BcaB05g25129 Brassica carinata
BcaC03g15804 Brassica carinata
BcaC08g47405 Brassica carinata
BolC2t09567H Brassica oleracea
BolC2t09568H Brassica oleracea
BolC6t40246H Brassica oleracea
BraA07t31869Z Brassica rapa
C02p35500 Brassica napus
C06p52240 Brassica napus
CAN.G970.12 Capsicum annuum
CANSAT54G2291 Cannabis sativa
CARHR071750 Cardamine hirsuta
Carub.0002s2518 Capsella rubella
Ca_16043_v3 Cicer arietinum L.
Cc10_g06810 Coffea canephora
CDE03G0287 Ceratophyllum demersum
Cfa013661 Carpinus fangiana
Ciclev10000161m.g Citrus clementina
CiPaw.07G177900 Carya illinoinensis
ClCG08G011220 Citrullus lanatus
COL.COLO4_12026 Corchorus olitorius
Cpa.g.sc36.163 Carica papaya
Cpa.g.sc36.164 Carica papaya
Cpa.g.sc36.165 Carica papaya
Cre07.g327150 Chlamydomonas reinhardtii
Cre09.g400441 Chlamydomonas reinhardtii
CsaV3_2G029800 Cucumis sativus L.
CSS0003030 Camellia sinensis var. sinensis
DCAR_019216 Daucus carota
Dinv19118 Davidia involucrata
Dinv44796 Davidia involucrata
Dinv44797 Davidia involucrata
ECA232G3235 Erigeron canadensis
EL10Ac1g01165 Beta vulgaris
Eucgr.F00367 Eucalyptus grandis
FAN04G0153 Fragaria x ananassa
FAN08G0375 Fragaria x ananassa
FAN13G1549 Fragaria x ananassa
FAN18G1557 Fragaria x ananassa
FvH4_5g36800 Fragaria vesca
Glyma.04G100002 Glycine max
Glyma.06G101600 Glycine max
Glyma.13G164200 Glycine max
Gohir.A01G132300 Gossypium hirsutum
Gohir.A05G224700 Gossypium hirsutum
Gohir.D01G115200 Gossypium hirsutum
Gohir.D05G227200 Gossypium hirsutum
Gorai.002G140900 Gossypium raimondii
Gorai.009G234900 Gossypium raimondii
GSVIVG01009071001 Vitis vinifera
HanXRQChr09g0250381 Helianthus annuus
Haze_22295 Corylus avellana
Hma1.2p1_0237F.1_g099640 Hydrangea macrophylla
HPP92_011163 Vanilla planifolia
HPP92_011193 Vanilla planifolia
HPP92_011199 Vanilla planifolia
HPP92_011200 Vanilla planifolia
Hund26976 Selenicereus undatus
Lalb_Chr11g0065321 Lupinus albus
Lj1g0014547 Lotus japonicus
Lj4C97T15 Lonicera japonica
Lsat_1_v5_gn_7_71901 Lactuca sativa
Lsat_1_v5_gn_9_72780 Lactuca sativa
Manes.18G065400 Manihot esculenta
Mapoly0027s0020 Marchantia polymorpha
MBI02_g27963_MAGBIO Magnolia biondii
MBI02_g33236_MAGBIO Magnolia biondii
MD08G1186800 Malus domestica
MD15G1372700 Malus domestica
Medtr3g099370 Medicago truncatula
MELO3C011038.2 Cucumis melo
Migut.N02884 Erythranthe guttata
MSTRG.22163 Avicennia marina
MSTRG.8520 Avicennia marina
Nitab4.5_0000786g0170 Nicotiana tabacum
Nitab4.5_0006196g0020 Nicotiana tabacum
Nn1g05429 Nelumbo nucifera
Nn2g14553 Nelumbo nucifera
Oeu054770.1 Olea europaea
Os03g0389900 Oryza sativa ssp. japonica
Peaxi162Scf00030g01716 Petunia axillaris
PGR042G2032 Punica granatum
PGSC0003DMG400030813 Solanum tuberosum
Phvul.009G032400 Phaseolus vulgaris
Potri.002G099400 Populus trichocarpa
Pp3c11_17580 Physcomitrium patens
Pp3c7_15150 Physcomitrium patens
PRCOL_00000836 Prasinoderma coloniale
PRCOL_00002305 Prasinoderma coloniale
Prupe.1G521300 Prunus persica
Psat5g051160 Pisum sativum
PSO210G3704 Papaver somniferum
PSO447G0244 Papaver somniferum
QL12p037399 Quercus lobata
QL12p038698 Quercus lobata
RcHm_v2.0_Chr2g0139391 Rosa chinensis
RcHm_v2.0_Chr7g0242931 Rosa chinensis
RcHm_v2.0_Chr7g0242951 Rosa chinensis
RcHm_v2.0_Chr7g0242991 Rosa chinensis
RcHm_v2.0_Chr7g0243001 Rosa chinensis
RcHm_v2.0_Chr7g0243011 Rosa chinensis
RcHm_v2.0_Chr7g0243141 Rosa chinensis
RcHm_v2.0_Chr7g0243151 Rosa chinensis
RcHm_v2.0_Chr7g0243161 Rosa chinensis
RcHm_v2.0_Chr7g0243351 Rosa chinensis
Rhsim06G0078900 Rhododendron simsii
Sabra02G0078000 Salix brachista
SalBow8G1618 Salvia bowleyana
Sc23g0000320 Simmondsia chinensis
Sed0005289 Sechium edule
SEGI_24064 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11909 Striga asiatica
SGA_v2.0_scaffold84G26485 Striga asiatica
SMO351G0300 Selaginella moellendorffii
Solyc04g074490.3 Solanum lycopersicum
Sopen04g029500 Solanum pennellii
Sp5g33400 Schrenkiella parvula
TAR381G1131 Trochodendron aralioides
TAR381G1374 Trochodendron aralioides
THA.LOC104810709 Tarenaya hassleriana
Thecc.08G103800 Theobroma cacao
Thecc.09G097900 Theobroma cacao
Thhalv10018079m.g Eutrema salsugineum
TPR.G14216 Trifolium pratense
TPR.G20515 Trifolium pratense
TWI12G1349 Tripterygium wilfordii
unitig_8.g3608 Utricularia gibba
vmacro21245 Vaccinium macrocarpon
vmacro21299 Vaccinium macrocarpon
VMungo0251G2803 Vigna mungo
Zm00001eb018970 Zea mays

User provided reference genes

Program Settings