Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44660 Brassica napus
Aa31LG8G11410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3192 Anthoceros agrestis
Actinidia11366 Actinidia chinensis
Actinidia20833 Actinidia chinensis
Actinidia35812 Actinidia chinensis
Actinidia39923 Actinidia chinensis
Ah.04g155350 Amaranthus hybridus
AL3G43090 Arabidopsis lyrata
AL3G43100 Arabidopsis lyrata
AL3G43120 Arabidopsis lyrata
Aqoxy2G03727 Aquilegia oxysepala
Aqoxy5G00162 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DHUA7P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P56WT2 Arachis hypogaea
AT2G05620 Arabidopsis thaliana
ATR0733G110 Amborella trichopoda
ATR1127G070 Amborella trichopoda
Atru.chr4.1937 Acer truncatum
AUR62016177 Chenopodium quinoa
AUR62035095 Chenopodium quinoa
BcaB06g26846 Brassica carinata
BcaB08g34505 Brassica carinata
BcaC01g03156 Brassica carinata
BcaC06g35923 Brassica carinata
BolC3t17826H Brassica oleracea
BolC7t41404H Brassica oleracea
BraA03t13600Z Brassica rapa
C03p55490 Brassica napus
C07p09630 Brassica napus
CAN.G220.85 Capsicum annuum
CARHR103280 Cardamine hirsuta
Carub.0003s2689 Capsella rubella
Ca_11922_v3 Cicer arietinum L.
CBR_g31156 Chara braunii
Cc03_g06030 Coffea canephora
CDE02G2944 Ceratophyllum demersum
CDE04G3689 Ceratophyllum demersum
Cfa014773 Carpinus fangiana
Ciclev10006216m.g Citrus clementina
CiPaw.01G179200 Carya illinoinensis
CiPaw.02G107900 Carya illinoinensis
ClCG06G007210 Citrullus lanatus
COL.COLO4_15949 Corchorus olitorius
Cpa.g.sc44.12 Carica papaya
Cre05.g242400 Chlamydomonas reinhardtii
CsaV3_2G012500 Cucumis sativus L.
CsaV3_3G011780 Cucumis sativus L.
CSS0001982 Camellia sinensis var. sinensis
CSS0013271 Camellia sinensis var. sinensis
DCAR_027339 Daucus carota
Dinv27097 Davidia involucrata
Dinv29813 Davidia involucrata
Duzib151G0671 Durio zibethinus
Duzib212G0408 Durio zibethinus
EL10Ac3g04953 Beta vulgaris
Eucgr.H02963 Eucalyptus grandis
FAN12G3003 Fragaria x ananassa
FAN17G1436 Fragaria x ananassa
FvH4_4g04430 Fragaria vesca
Glyma.10G136300 Glycine max
Glyma.20G085900 Glycine max
Gohir.A01G025800 Gossypium hirsutum
Gohir.A09G227900 Gossypium hirsutum
Gohir.A10G108500 Gossypium hirsutum
Gohir.D01G023418 Gossypium hirsutum
Gohir.D09G228900 Gossypium hirsutum
Gohir.D10G159300 Gossypium hirsutum
Gorai.002G026400 Gossypium raimondii
Gorai.006G251600 Gossypium raimondii
Gorai.011G178900 Gossypium raimondii
GSVIVG01027902001 Vitis vinifera
HanXRQChr01g0022921 Helianthus annuus
HanXRQChr02g0059331 Helianthus annuus
HanXRQChr11g0343071 Helianthus annuus
Haze_11447 Corylus avellana
Hma1.2p1_0112F.1_g054580 Hydrangea macrophylla
Hma1.2p1_0385F.1_g141490 Hydrangea macrophylla
HPP92_008537 Vanilla planifolia
Hund03081 Selenicereus undatus
Hund27524 Selenicereus undatus
Hund27531 Selenicereus undatus
Lalb_Chr01g0020281 Lupinus albus
Lalb_Chr03g0037001 Lupinus albus
Lalb_Chr19g0128491 Lupinus albus
Lj6g0012692 Lotus japonicus
Lsat_1_v5_gn_1_75300 Lactuca sativa
Lsat_1_v5_gn_6_68641 Lactuca sativa
Manes.03G160100 Manihot esculenta
Manes.15G044800 Manihot esculenta
Mapoly0121s0039 Marchantia polymorpha
MBI07_g12928_MAGBIO Magnolia biondii
MCO16G064 Micromonas commoda
MD13G1219800 Malus domestica
MD16G1225200 Malus domestica
Medtr1g045140 Medicago truncatula
MELO3C006384.2 Cucumis melo
MELO3C023036.2 Cucumis melo
Migut.G00486 Erythranthe guttata
Migut.N00294 Erythranthe guttata
MSTRG.4162 Avicennia marina
Nitab4.5_0001051g0110 Nicotiana tabacum
Nitab4.5_0002709g0020 Nicotiana tabacum
Nn1g02928 Nelumbo nucifera
Nn1g09503 Nelumbo nucifera
Nn3g19756 Nelumbo nucifera
Oeu002290.1 Olea europaea
Oeu055253.1 Olea europaea
Oeu059400.1 Olea europaea
Os08g0566600 Oryza sativa ssp. japonica
Peaxi162Scf00033g02911 Petunia axillaris
PGR004G2594 Punica granatum
PGSC0003DMG400017198 Solanum tuberosum
Phvul.007G271000 Phaseolus vulgaris
Potri.008G171000 Populus trichocarpa
Potri.010G066900 Populus trichocarpa
Pp3c24_11690 Physcomitrium patens
Pp3c8_17140 Physcomitrium patens
PRCOL_00004079 Prasinoderma coloniale
Prupe.1G046500 Prunus persica
Psat6g106280 Pisum sativum
PSO674G0081 Papaver somniferum
PSO832G3336 Papaver somniferum
QL06p020769 Quercus lobata
RcHm_v2.0_Chr4g0394991 Rosa chinensis
Rhsim02G0043000 Rhododendron simsii
Rhsim04G0173400 Rhododendron simsii
Sabra08G0130800 Salix brachista
Sabra10G0040600 Salix brachista
SalBow3G4432 Salvia bowleyana
Sc13g0006160 Simmondsia chinensis
Sed0009082 Sechium edule
Sed0028180 Sechium edule
SEGI_28577 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12643 Striga asiatica
Solyc09g090570.2 Solanum lycopersicum
Sopen09g033510 Solanum pennellii
Sp3g24080 Schrenkiella parvula
TAR362G0439 Trochodendron aralioides
TAR365G0027 Trochodendron aralioides
THA.LOC104808875 Tarenaya hassleriana
THA.LOC104826602 Tarenaya hassleriana
Thecc.04G262300 Theobroma cacao
Thhalv10002723m.g Eutrema salsugineum
TPR.G23990 Trifolium pratense
TWI53G1324 Tripterygium wilfordii
TWI73G1205 Tripterygium wilfordii
unitig_32.g10853 Utricularia gibba
vmacro08545 Vaccinium macrocarpon
vmacro15472 Vaccinium macrocarpon
VMungo0720G1886 Vigna mungo
Zm00001eb038530 Zea mays
Zm00001eb175600 Zea mays

User provided reference genes

Program Settings