Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00530 Brassica napus
A09p28800 Brassica napus
Aa31LG1G28660 Aethionema arabicum
Aa31LG1G28670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2572 Anthoceros agrestis
Actinidia17900 Actinidia chinensis
Actinidia20992 Actinidia chinensis
Actinidia25852 Actinidia chinensis
Ah.02g112330 Amaranthus hybridus
Ah.11g049210 Amaranthus hybridus
AL3G49500 Arabidopsis lyrata
AL4G46930 Arabidopsis lyrata
Aqoxy2G02758 Aquilegia oxysepala
Aqoxy2G02760 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KTVD8H Arachis hypogaea
AT2G16760 Arabidopsis thaliana
AT2G47370 Arabidopsis thaliana
AT5G28660 Arabidopsis thaliana
ATR0796G226 Amborella trichopoda
Atru.chr5.992_Atru.chr5.993 Acer truncatum
AUR62011799 Chenopodium quinoa
AUR62024646 Chenopodium quinoa
BcaB01g01454 Brassica carinata
BcaB02g08780 Brassica carinata
BcaB02g08782 Brassica carinata
BcaB06g29450 Brassica carinata
BcaC02g06969 Brassica carinata
BcaC02g12569 Brassica carinata
BcaC04g21021 Brassica carinata
BolC4t21691H Brassica oleracea
BolC4t28755H Brassica oleracea
BolC9t56491H Brassica oleracea
BraA05t19051Z Brassica rapa
BraA09t38442Z Brassica rapa
C04p00570 Brassica napus
C04p72740 Brassica napus
C09p36580 Brassica napus
C09p36590 Brassica napus
CAN.G100.82 Capsicum annuum
CANSAT25G0248 Cannabis sativa
CARHR142750 Cardamine hirsuta
Carub.0003s3057 Capsella rubella
Carub.0004s3009 Capsella rubella
Ca_10281_v3 Cicer arietinum L.
Cc01_g21460 Coffea canephora
CDE11G1147 Ceratophyllum demersum
Cfa005792 Carpinus fangiana
Ciclev10021076m.g Citrus clementina
Ciclev10023964m.g Citrus clementina
Ciclev10024542m.g Citrus clementina
CiPaw.07G117800 Carya illinoinensis
CiPaw.08G089600 Carya illinoinensis
ClCG10G011420 Citrullus lanatus
COL.COLO4_23228 Corchorus olitorius
Cpa.g.sc18.47 Carica papaya
CsaV3_4G001230 Cucumis sativus L.
CSS0029246 Camellia sinensis var. sinensis
DCAR_005754 Daucus carota
DCAR_025639 Daucus carota
Dinv33120 Davidia involucrata
Duzib133G0131 Durio zibethinus
Duzib138G0989 Durio zibethinus
EL10As5g23537 Beta vulgaris
Eucgr.H01012 Eucalyptus grandis
Eucgr.H01013 Eucalyptus grandis
FAN04G1954 Fragaria x ananassa
FAN08G2325 Fragaria x ananassa
FAN13G1005 Fragaria x ananassa
FAN18G0331 Fragaria x ananassa
FAN18G2737 Fragaria x ananassa
FvH4_5g39130 Fragaria vesca
Glyma.02G012300 Glycine max
Glyma.10G012700 Glycine max
Gohir.A08G119500 Gossypium hirsutum
Gohir.A11G109300 Gossypium hirsutum
Gohir.A11G109400 Gossypium hirsutum
Gohir.D08G140400 Gossypium hirsutum
Gohir.D11G113900 Gossypium hirsutum
Gohir.D11G114000 Gossypium hirsutum
Gorai.004G144500 Gossypium raimondii
Gorai.007G122500 Gossypium raimondii
Gorai.007G122600 Gossypium raimondii
GSVIVG01028122001 Vitis vinifera
HanXRQChr04g0106131 Helianthus annuus
HanXRQChr06g0168131 Helianthus annuus
Haze_05050 Corylus avellana
Hma1.2p1_0486F.1_g163310 Hydrangea macrophylla
Hund02941 Selenicereus undatus
Hund09634 Selenicereus undatus
Lalb_Chr02g0146841 Lupinus albus
Lalb_Chr21g0309601 Lupinus albus
Lj1A16T42 Lonicera japonica
Lj2A1206T28 Lonicera japonica
Lj2C1206T9 Lonicera japonica
Lj5g0024022 Lotus japonicus
Lsat_1_v5_gn_8_166741 Lactuca sativa
Manes.01G228100 Manihot esculenta
Manes.05G003800 Manihot esculenta
Mapoly0071s0020 Marchantia polymorpha
MBI19_g07236_MAGBIO Magnolia biondii
MD03G1294500 Malus domestica
Medtr1g086990 Medicago truncatula
Medtr3g096580 Medicago truncatula
MELO3C017915.2 Cucumis melo
Migut.D00081 Erythranthe guttata
MSTRG.21688 Avicennia marina
Nitab4.5_0003540g0060 Nicotiana tabacum
Nitab4.5_0005458g0010 Nicotiana tabacum
Nn4g25592 Nelumbo nucifera
Oeu014942.1 Olea europaea
Oeu047395.1 Olea europaea
Os03g0307400 Oryza sativa ssp. japonica
Os10g0443000 Oryza sativa ssp. japonica
Os10g0443100 Oryza sativa ssp. japonica
Peaxi162Scf00225g00006 Petunia axillaris
Peaxi162Scf00691g00316 Petunia axillaris
PGR083G2512 Punica granatum
PGSC0003DMG400009011 Solanum tuberosum
Phvul.007G214000 Phaseolus vulgaris
Potri.014G120300 Populus trichocarpa
Prupe.8G266600 Prunus persica
Psat6g161520 Pisum sativum
PSO210G6845 Papaver somniferum
PSO761G0661 Papaver somniferum
QL12p019858 Quercus lobata
RcHm_v2.0_Chr7g0241121 Rosa chinensis
Rhsim01G0291100 Rhododendron simsii
Rhsim11G0030200 Rhododendron simsii
Sabra14G0089300 Salix brachista
SalBow3G3328 Salvia bowleyana
Sc05g0000400 Simmondsia chinensis
Sed0019620 Sechium edule
SGA_v2.0_scaffold376G50285 Striga asiatica
SGA_v2.0_scaffold42G16138 Striga asiatica
SMO119G0186 Selaginella moellendorffii
Solyc01g079410.3 Solanum lycopersicum
Sopen01g031200 Solanum pennellii
Sp4g29310 Schrenkiella parvula
Sp6g07280 Schrenkiella parvula
SpUn0121_0030 Schrenkiella parvula
TAR362G0385 Trochodendron aralioides
TAR633G1097 Trochodendron aralioides
THA.LOC104802153 Tarenaya hassleriana
Thecc.01G313900 Theobroma cacao
Thhalv10001544m.g Eutrema salsugineum
TPR.G38696 Trifolium pratense
TWI18G0311 Tripterygium wilfordii
TWI75G1211 Tripterygium wilfordii
unitig_62.g23907 Utricularia gibba
vmacro15110 Vaccinium macrocarpon
VMungo0720G2414 Vigna mungo
Zm00001eb014720 Zea mays
Zm00001eb396100 Zea mays

User provided reference genes

Program Settings