Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia06212 Actinidia chinensis
Ah.12g064820 Amaranthus hybridus
Aqoxy7G01816 Aquilegia oxysepala
Aqoxy7G01817 Aquilegia oxysepala
ATR0307G019 Amborella trichopoda
Atru.chr1.1305 Acer truncatum
Atru.chr12.1252 Acer truncatum
Atru.chr12.1253 Acer truncatum
AUR62031693 Chenopodium quinoa
AUR62032575 Chenopodium quinoa
CAN.G954.27 Capsicum annuum
CANSAT56G0968 Cannabis sativa
Ca_14205_v3 Cicer arietinum L.
Cc07_g16100 Coffea canephora
CDE07G1126 Ceratophyllum demersum
CDE08G1041 Ceratophyllum demersum
Cfa010963 Carpinus fangiana
Ciclev10001722m.g Citrus clementina
CiPaw.10G043300 Carya illinoinensis
CiPaw.13G016600 Carya illinoinensis
ClCG08G010720 Citrullus lanatus
COL.COLO4_38386 Corchorus olitorius
Cpa.g.sc3370.1 Carica papaya
CsaV3_6G035820 Cucumis sativus L.
CSS0011929 Camellia sinensis var. sinensis
CSS0031361 Camellia sinensis var. sinensis
DCAR_006408 Daucus carota
DCAR_006409 Daucus carota
DCAR_006410 Daucus carota
Dinv02682 Davidia involucrata
Dinv20746 Davidia involucrata
Dinv31999 Davidia involucrata
Dinv36117 Davidia involucrata
Duzib106G1506 Durio zibethinus
Duzib114G0468 Durio zibethinus
ECA234G3523 Erigeron canadensis
EL10Ac2g02731 Beta vulgaris
Eucgr.G03202 Eucalyptus grandis
FAN01G2579 Fragaria x ananassa
FAN03G1948 Fragaria x ananassa
FAN06G1401 Fragaria x ananassa
FAN06G2035 Fragaria x ananassa
FAN06G2918 Fragaria x ananassa
FvH4_7g04030 Fragaria vesca
FvH4_7g04040 Fragaria vesca
FvH4_7g04070 Fragaria vesca
Glyma.06G310100 Glycine max
Glyma.13G189800 Glycine max
Gohir.A06G174100 Gossypium hirsutum
Gohir.D06G184200 Gossypium hirsutum
Gorai.010G215600 Gossypium raimondii
GSVIVG01025780001 Vitis vinifera
GSVIVG01025797001 Vitis vinifera
GSVIVG01036591001 Vitis vinifera
HanXRQChr09g0252101 Helianthus annuus
HanXRQChr16g0525291 Helianthus annuus
Haze_02974 Corylus avellana
Hma1.2p1_0233F.1_g098340 Hydrangea macrophylla
Hma1.2p1_1342F.1_g277010 Hydrangea macrophylla
Lalb_Chr01g0007461 Lupinus albus
Lj1P1083T22 Lonicera japonica
Lj2P411T16 Lonicera japonica
Lj3g0007425 Lotus japonicus
Lj3g0015864 Lotus japonicus
Lj9A633T57 Lonicera japonica
Lsat_1_v5_gn_1_64940 Lactuca sativa
Lsat_1_v5_gn_4_31100 Lactuca sativa
Lsat_1_v5_gn_4_31120 Lactuca sativa
Lsat_1_v5_gn_4_31761 Lactuca sativa
Manes.11G008300 Manihot esculenta
MBI13_g05464_MAGBIO Magnolia biondii
MBI13_g15088_MAGBIO Magnolia biondii
MBI13_g20756_MAGBIO Magnolia biondii
MBI16_g16462_MAGBIO Magnolia biondii
MBI16_g16463_MAGBIO Magnolia biondii
MBI16_g16464_MAGBIO Magnolia biondii
MBI19_g02321_MAGBIO Magnolia biondii
MBI19_g02323_MAGBIO Magnolia biondii
MD02G1275500 Malus domestica
MD02G1275900 Malus domestica
MD02G1276300 Malus domestica
MD02G1276600 Malus domestica
MD07G1043400 Malus domestica
Medtr3g012440 Medicago truncatula
MELO3C011389.2 Cucumis melo
Migut.B01179 Erythranthe guttata
MSTRG.20496 Avicennia marina
Nitab4.5_0001236g0010 Nicotiana tabacum
Nitab4.5_0002719g0120 Nicotiana tabacum
Nitab4.5_0004596g0010 Nicotiana tabacum
Nitab4.5_0009058g0010 Nicotiana tabacum
Nitab4.5_0010392g0010 Nicotiana tabacum
Nn001s41350 Nelumbo nucifera
Nn1g07739 Nelumbo nucifera
Oeu014624.1 Olea europaea
Os05g0410200 Oryza sativa ssp. japonica
Os11g0138900 Oryza sativa ssp. japonica
Os12g0135500 Oryza sativa ssp. japonica
Os12g0135800 Oryza sativa ssp. japonica
Peaxi162Scf01312g00048 Petunia axillaris
PGR031G0016 Punica granatum
PGSC0003DMG400021128 Solanum tuberosum
Phvul.005G016400 Phaseolus vulgaris
Phvul.011G197000 Phaseolus vulgaris
Potri.001G032400 Populus trichocarpa
Potri.003G192600 Populus trichocarpa
Potri.003G192650 Populus trichocarpa
Potri.016G031500 Populus trichocarpa
Prupe.2G044700 Prunus persica
Prupe.2G045000 Prunus persica
Prupe.2G045300 Prunus persica
Psat5g223920 Pisum sativum
PSO017G2837 Papaver somniferum
PSO063G7155 Papaver somniferum
QL02p088669 Quercus lobata
QL04p021605 Quercus lobata
QL04p021627 Quercus lobata
QL93p0137_0010 Quercus lobata
RcHm_v2.0_Chr1g0327821 Rosa chinensis
RcHm_v2.0_Chr1g0327841 Rosa chinensis
RcHm_v2.0_Chr1g0327851 Rosa chinensis
RcHm_v2.0_Chr1g0327881 Rosa chinensis
RcHm_v2.0_Chr1g0327901 Rosa chinensis
Rhsim07G0071400 Rhododendron simsii
Rhsim07G0071500 Rhododendron simsii
Sabra01G0023100 Salix brachista
Sabra03G0143500 Salix brachista
Sabra16G0034800 Salix brachista
Sabra16G0034900 Salix brachista
SalBow5G0800 Salvia bowleyana
SalBow5G1300 Salvia bowleyana
Sc11g0006240 Simmondsia chinensis
Sed0009529 Sechium edule
SEGI_29288 Sequoiadendron giganteum
SEGI_39324 Sequoiadendron giganteum
SEGI_39464 Sequoiadendron giganteum
SGA_v2.0_scaffold96G29077 Striga asiatica
Solyc02g069800.1 Solanum lycopersicum
Sopen02g018960 Solanum pennellii
TAR623G0855 Trochodendron aralioides
TAR633G0891 Trochodendron aralioides
Thecc.10G139500 Theobroma cacao
Thecc.10G139900 Theobroma cacao
Thecc.10G140100 Theobroma cacao
Thecc.10G140200 Theobroma cacao
TPR.G9965 Trifolium pratense
TWI63G0943 Tripterygium wilfordii
TWI74G0963 Tripterygium wilfordii
vmacro13775 Vaccinium macrocarpon
VMungo1080G1129 Vigna mungo
VMungo1127G0236 Vigna mungo
Zm00001eb287920 Zea mays
Zm00001eb287940 Zea mays
Zm00001eb349490 Zea mays

User provided reference genes

Program Settings