Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p30490 Brassica napus
A09p02620 Brassica napus
Aa31LG5G2780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1073 Anthoceros agrestis
Actinidia12471 Actinidia chinensis
Actinidia18739 Actinidia chinensis
Actinidia25411 Actinidia chinensis
Actinidia35286 Actinidia chinensis
Ah.01g014440 Amaranthus hybridus
AL6G49650 Arabidopsis lyrata
Aqoxy1G03926 Aquilegia oxysepala
Aqoxy1G03929 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.39S8LV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F0UT86 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NN0MZU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V1P8P6 Arachis hypogaea
AT4G03280 Arabidopsis thaliana
ATR1132G116 Amborella trichopoda
Atru.chr6.3090 Acer truncatum
AUR62025154 Chenopodium quinoa
AUR62033720 Chenopodium quinoa
BcaB01g01960 Brassica carinata
BcaB01g02517 Brassica carinata
BcaC01g06693 Brassica carinata
BcaC04g23984 Brassica carinata
BolC3t15998H Brassica oleracea
BolC9t53193H Brassica oleracea
BraA03t12231Z Brassica rapa
BraA09t35905Z Brassica rapa
C03p36910 Brassica napus
C09p02650 Brassica napus
CAN.G980.4 Capsicum annuum
CANSAT11G1961 Cannabis sativa
CARHR251730 Cardamine hirsuta
Carub.0006s3378 Capsella rubella
Ca_01549_v3 Cicer arietinum L.
CBR_g52397 Chara braunii
Cc05_g05920 Coffea canephora
CDE01G0070 Ceratophyllum demersum
CDE12G0380 Ceratophyllum demersum
Cfa020490 Carpinus fangiana
Ciclev10016706m.g Citrus clementina
CiPaw.11G178400 Carya illinoinensis
CiPaw.12G123600 Carya illinoinensis
ClCG02G001400 Citrullus lanatus
COL.COLO4_06040 Corchorus olitorius
Cpa.g.sc34.64 Carica papaya
Cre11.g467689 Chlamydomonas reinhardtii
CsaV3_7G004050 Cucumis sativus L.
CSS0013440 Camellia sinensis var. sinensis
DCAR_008695 Daucus carota
Dinv13841 Davidia involucrata
Duzib052G0720 Durio zibethinus
Duzib132G0433 Durio zibethinus
Duzib248G1304 Durio zibethinus
ECA236G1690 Erigeron canadensis
ECA240G4341 Erigeron canadensis
EL10Ac9g20726 Beta vulgaris
Eucgr.A01769 Eucalyptus grandis
Eucgr.F01067 Eucalyptus grandis
FAN02G1221 Fragaria x ananassa
FAN05G5200 Fragaria x ananassa
FAN05G5597 Fragaria x ananassa
FAN09G3163 Fragaria x ananassa
FAN14G2217 Fragaria x ananassa
FvH4_6g44370 Fragaria vesca
Glyma.12G199400 Glycine max
Glyma.13G302900 Glycine max
Gohir.A03G160900 Gossypium hirsutum
Gohir.A03G161000 Gossypium hirsutum
Gohir.D02G184300 Gossypium hirsutum
Gohir.D02G184350 Gossypium hirsutum
Gorai.005G206500 Gossypium raimondii
Gorai.005G206600 Gossypium raimondii
GSVIVG01000453001 Vitis vinifera
GSVIVG01014457001 Vitis vinifera
GSVIVG01015713001 Vitis vinifera
HanXRQChr03g0077251 Helianthus annuus
HanXRQChr13g0407301 Helianthus annuus
HanXRQChr15g0494521 Helianthus annuus
Haze_09549 Corylus avellana
Hma1.2p1_1258F.1_g270890 Hydrangea macrophylla
Hma1.2p1_2769F.1_g328190 Hydrangea macrophylla
HPP92_001796 Vanilla planifolia
Hund01214 Selenicereus undatus
Lalb_Chr14g0366531 Lupinus albus
Lalb_Chr22g0356281 Lupinus albus
Lalb_Chr24g0399801 Lupinus albus
Lj1A855G17 Lonicera japonica
Lj3g0005468 Lotus japonicus
Lj8C161T8 Lonicera japonica
Lsat_1_v5_gn_0_5321 Lactuca sativa
Lsat_1_v5_gn_7_105940 Lactuca sativa
Manes.13G077148 Manihot esculenta
Manes.14G016000 Manihot esculenta
Mapoly0015s0074 Marchantia polymorpha
MBI18_g36116_MAGBIO Magnolia biondii
MCO06G171 Micromonas commoda
MD09G1098300 Malus domestica
MD10G1189200 Malus domestica
MD17G1086300 Malus domestica
Medtr2g089510 Medicago truncatula
MELO3C018775.2 Cucumis melo
Migut.M00361 Erythranthe guttata
MSTRG.6530 Avicennia marina
Nitab4.5_0002714g0020 Nicotiana tabacum
Nitab4.5_0014322g0020 Nicotiana tabacum
Nn1g03832 Nelumbo nucifera
Oeu006770.1 Olea europaea
Oeu019373.1 Olea europaea
Os07g0556200 Oryza sativa ssp. japonica
Peaxi162Scf00485g00109 Petunia axillaris
PGR042G3467 Punica granatum
PGR083G1071 Punica granatum
PGSC0003DMG400013751 Solanum tuberosum
Phvul.005G109400 Phaseolus vulgaris
Potri.013G148900 Populus trichocarpa
Potri.019G118500 Populus trichocarpa
Pp3c3_35180 Physcomitrium patens
Pp3c8_1940 Physcomitrium patens
PRCOL_00002197 Prasinoderma coloniale
Prupe.3G228100 Prunus persica
Psat5g267960 Pisum sativum
PSO541G4076 Papaver somniferum
PSO675G3482 Papaver somniferum
QL08p036617 Quercus lobata
RcHm_v2.0_Chr1g0330511 Rosa chinensis
RcHm_v2.0_Chr2g0161301 Rosa chinensis
RhsimUnG0257700 Rhododendron simsii
Sabra13G0120100 Salix brachista
Sabra19G0119100 Salix brachista
Sabra19G0134800 Salix brachista
SalBow7G3919 Salvia bowleyana
Sc21g0002180 Simmondsia chinensis
Sed0023828 Sechium edule
SEGI_32030 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37610 Striga asiatica
SGA_v2.0_scaffold49G18316 Striga asiatica
SMO358G0667 Selaginella moellendorffii
Solyc12g005630.2 Solanum lycopersicum
Sopen12g001560 Solanum pennellii
Sp6g03320 Schrenkiella parvula
TAR627G1043 Trochodendron aralioides
THA.LOC104801189 Tarenaya hassleriana
Thecc.02G168200 Theobroma cacao
Thhalv10028941m.g Eutrema salsugineum
TPR.G18047 Trifolium pratense
TWI36G0474 Tripterygium wilfordii
unitig_699.g19605 Utricularia gibba
unitig_85.g27301 Utricularia gibba
vmacro09572 Vaccinium macrocarpon
VMungo1080G0078 Vigna mungo
Zm00001eb204410 Zea mays
Zm00001eb238370 Zea mays

User provided reference genes

Program Settings