Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p01650 Brassica napus
A09p12190 Brassica napus
Aa31LG8G16140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis
Actinidia06358 Actinidia chinensis
Actinidia22469 Actinidia chinensis
Ah.09g230170 Amaranthus hybridus
AL3G52840 Arabidopsis lyrata
Aqoxy7G02735 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea
AT2G19080 Arabidopsis thaliana
ATR0626G278 Amborella trichopoda
Atru.chr7.819 Acer truncatum
AUR62021331 Chenopodium quinoa
AUR62033246 Chenopodium quinoa
BcaB03g16704 Brassica carinata
BcaB07g31622 Brassica carinata
BcaC04g22869 Brassica carinata
BcaC06g36518 Brassica carinata
BolC7t40740H Brassica oleracea
BolC9t54347H Brassica oleracea
BraA07t27967Z Brassica rapa
BraA09t36865Z Brassica rapa
C07p03410 Brassica napus
C09p14440 Brassica napus
CAN.G1668.9 Capsicum annuum
CAN.G266.1 Capsicum annuum
CAN.G497.61 Capsicum annuum
CAN.G609.4 Capsicum annuum
CANSAT11G1051 Cannabis sativa
CARHR109600 Cardamine hirsuta
Carub.0003s3332 Capsella rubella
Ca_02042_v3 Cicer arietinum L.
Ca_02046_v3 Cicer arietinum L.
Cc06_g22600 Coffea canephora
CDE06G1906 Ceratophyllum demersum
Cfa013431 Carpinus fangiana
Ciclev10008916m.g Citrus clementina
CiPaw.07G195100 Carya illinoinensis
CiPaw.08G033800 Carya illinoinensis
ClCG06G013520 Citrullus lanatus
COL.COLO4_29315 Corchorus olitorius
Cpa.g.sc95.29 Carica papaya
Cre03.g177900 Chlamydomonas reinhardtii
CsaV3_1G031790 Cucumis sativus L.
CSS0001946 Camellia sinensis var. sinensis
CSS0025965 Camellia sinensis var. sinensis
Dinv25404 Davidia involucrata
Dinv26443 Davidia involucrata
Duzib168G0714 Durio zibethinus
Duzib170G0205 Durio zibethinus
ECA232G3088 Erigeron canadensis
EL10Ac8g18317 Beta vulgaris
Eucgr.C00132 Eucalyptus grandis
FAN12G2798 Fragaria x ananassa
FAN17G0253 Fragaria x ananassa
FAN22G1928 Fragaria x ananassa
FvH4_4g07590 Fragaria vesca
Glyma.09G057900 Glycine max
Glyma.13G099400 Glycine max
Glyma.15G164000 Glycine max
Glyma.17G060700 Glycine max
Gohir.A08G017900 Gossypium hirsutum
Gohir.D08G028500 Gossypium hirsutum
Gorai.004G025600 Gossypium raimondii
GSVIVG01010902001 Vitis vinifera
HanXRQChr04g0105741 Helianthus annuus
HanXRQChr04g0105751 Helianthus annuus
HanXRQChr09g0266261 Helianthus annuus
HanXRQChr10g0297571 Helianthus annuus
Haze_21984 Corylus avellana
Haze_21985 Corylus avellana
Haze_21988 Corylus avellana
HPP92_004723 Vanilla planifolia
Hund09046 Selenicereus undatus
Lalb_Chr12g0199511 Lupinus albus
Lalb_Chr15g0084091 Lupinus albus
Lj4g0016729 Lotus japonicus
Lj6g0005497 Lotus japonicus
Lj7A127G13 Lonicera japonica
Lsat_1_v5_gn_4_183080 Lactuca sativa
Manes.04G060300 Manihot esculenta
Manes.14G161401 Manihot esculenta
Mapoly0001s0301 Marchantia polymorpha
MBI13_g31546_MAGBIO Magnolia biondii
MCO15G325 Micromonas commoda
MD13G1245600 Malus domestica
Medtr2g036910 Medicago truncatula
Medtr4g127630 Medicago truncatula
MELO3C017439.2 Cucumis melo
MELO3C029108.2 Cucumis melo
Migut.L01897 Erythranthe guttata
MSTRG.10452 Avicennia marina
Nitab4.5_0000074g0040 Nicotiana tabacum
Nitab4.5_0010281g0010 Nicotiana tabacum
Nn2g12745 Nelumbo nucifera
Oeu000976.1 Olea europaea
Os06g0168000 Oryza sativa ssp. japonica
Peaxi162Scf00324g00718 Petunia axillaris
PGR044G2653 Punica granatum
PGSC0003DMG400008514 Solanum tuberosum
Phvul.003G142900 Phaseolus vulgaris
Phvul.009G237800 Phaseolus vulgaris
Potri.001G064609 Populus trichocarpa
Potri.001G065000 Populus trichocarpa
Potri.001G065336 Populus trichocarpa
Potri.006G077100 Populus trichocarpa
Potri.018G145080 Populus trichocarpa
Potri.018G145508 Populus trichocarpa
Potri.018G147625 Populus trichocarpa
Pp3c12_12510 Physcomitrium patens
Pp3c4_10660 Physcomitrium patens
PRCOL_00000454 Prasinoderma coloniale
Prupe.1G079200 Prunus persica
Psat0s736g0040 Pisum sativum
Psat1g145840 Pisum sativum
PSO079G0045 Papaver somniferum
PSO423G0181 Papaver somniferum
QL05p087685 Quercus lobata
QL12p032381 Quercus lobata
RcHm_v2.0_Chr4g0400191 Rosa chinensis
RcHm_v2.0_Chr7g0191431 Rosa chinensis
RcHm_v2.0_Chr7g0191541 Rosa chinensis
Rhsim13G0200500 Rhododendron simsii
Sabra06G0058400 Salix brachista
SalBow7G0268 Salvia bowleyana
SalBow7G3904 Salvia bowleyana
Sc14g0001370 Simmondsia chinensis
Sed0004411 Sechium edule
SGA_v2.0_scaffold21G09637 Striga asiatica
SGA_v2.0_scaffold41G15854 Striga asiatica
SGA_v2.0_scaffold41G15864 Striga asiatica
SHI02877 Sapria himalayana
SMO230G0066 Selaginella moellendorffii
SMO358G0154 Selaginella moellendorffii
SMO367G0296 Selaginella moellendorffii
SMO367G1182 Selaginella moellendorffii
Solyc07g009320.3 Solanum lycopersicum
Sopen07g005070 Solanum pennellii
Sp3g32480 Schrenkiella parvula
TAR636G1425 Trochodendron aralioides
THA.LOC104819968 Tarenaya hassleriana
Thecc.09G181200 Theobroma cacao
Thhalv10022785m.g Eutrema salsugineum
TPR.G5388 Trifolium pratense
TPR.G9028 Trifolium pratense
TWI63G0533 Tripterygium wilfordii
unitig_578.g16069 Utricularia gibba
vmacro04071 Vaccinium macrocarpon
vmacro23062 Vaccinium macrocarpon
VMungo1215G0406 Vigna mungo
VMungo1309G2393 Vigna mungo
Zm00001eb375500 Zea mays

User provided reference genes

Program Settings