Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33460 Brassica napus
A06p09920 Brassica napus
A08p32210 Brassica napus
A09p62620 Brassica napus
Aa31LG1G1110 Aethionema arabicum
Aa31LG2G7150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1132 Anthoceros agrestis
Actinidia12326 Actinidia chinensis
Actinidia28634 Actinidia chinensis
Ah.03g139110 Amaranthus hybridus
AL1G25730 Arabidopsis lyrata
AL5G13210 Arabidopsis lyrata
Aqoxy3G03574 Aquilegia oxysepala
AT1G13900 Arabidopsis thaliana
AT2G03450 Arabidopsis thaliana
ATR0064G125 Amborella trichopoda
Atru.chr11.1670_Atru.chr11.1671 Acer truncatum
Atru.chr11.1677 Acer truncatum
Atru.chr11.1678 Acer truncatum
AUR62003124 Chenopodium quinoa
AUR62007945 Chenopodium quinoa
BcaB03g13125 Brassica carinata
BcaB07g30300 Brassica carinata
BcaB08g34345 Brassica carinata
BcaC03g17215 Brassica carinata
BcaC05g25288 Brassica carinata
BcaC07g38707 Brassica carinata
BcaC07g41614 Brassica carinata
BolC2t11233H Brassica oleracea
BolC5t29916H Brassica oleracea
BolC8t49261H Brassica oleracea
BolC8t52167H Brassica oleracea
BraA02t08367Z Brassica rapa
BraA06t24180Z Brassica rapa
BraA08t35144Z Brassica rapa
BraA09t41626Z Brassica rapa
C02p51450 Brassica napus
C05p11690 Brassica napus
C08p16370 Brassica napus
C08p46180 Brassica napus
CAN.G822.5 Capsicum annuum
CANSAT64G2609 Cannabis sativa
CARHR014270 Cardamine hirsuta
CARHR145810 Cardamine hirsuta
Carub.0001s1360 Capsella rubella
Carub.0005s0242 Capsella rubella
Ca_18811_v3 Cicer arietinum L.
CBR_g36291 Chara braunii
Cc00_g33340 Coffea canephora
Cc11_g12240 Coffea canephora
Cc11_g12250 Coffea canephora
Cc11_g12260 Coffea canephora
CDE04G0516 Ceratophyllum demersum
Cfa008898 Carpinus fangiana
Ciclev10030896m.g Citrus clementina
CiPaw.05G127100 Carya illinoinensis
ClCG09G020770 Citrullus lanatus
COL.COLO4_27918 Corchorus olitorius
Cpa.g.sc1.102 Carica papaya
CsaV3_5G025610 Cucumis sativus L.
CSS0043624 Camellia sinensis var. sinensis
CSS0048409 Camellia sinensis var. sinensis
DCAR_007185 Daucus carota
DCAR_027455 Daucus carota
Dinv16713 Davidia involucrata
Dinv34088 Davidia involucrata
Duzib251G0683 Durio zibethinus
Duzib268G0545 Durio zibethinus
ECA234G3889 Erigeron canadensis
Eucgr.B03168 Eucalyptus grandis
Eucgr.B03170 Eucalyptus grandis
FAN07G0174 Fragaria x ananassa
FAN12G3455 Fragaria x ananassa
FAN17G2030 Fragaria x ananassa
FAN22G1726 Fragaria x ananassa
FvH4_4g30400 Fragaria vesca
FvH4_6g46911 Fragaria vesca
Glyma.20G026800 Glycine max
Gohir.A13G080400 Gossypium hirsutum
Gohir.D13G080200 Gossypium hirsutum
Gorai.013G091900 Gossypium raimondii
GSVIVG01012203001 Vitis vinifera
HanXRQChr12g0379761 Helianthus annuus
Haze_11928 Corylus avellana
Hma1.2p1_0357F.1_g134500 Hydrangea macrophylla
HPP92_012303 Vanilla planifolia
Hund25192 Selenicereus undatus
Hund30218 Selenicereus undatus
Hund30219 Selenicereus undatus
Lalb_Chr09g0329081 Lupinus albus
Lj4g0005844 Lotus japonicus
Lj6C782T10 Lonicera japonica
Lsat_1_v5_gn_4_12180 Lactuca sativa
Manes.01G029400 Manihot esculenta
Mapoly0122s0035 Marchantia polymorpha
MBI16_g16375_MAGBIO Magnolia biondii
MD13G1064900 Malus domestica
Medtr4g082930 Medicago truncatula
Medtr4g082940 Medicago truncatula
MELO3C002922.2 Cucumis melo
Migut.L01209 Erythranthe guttata
MSTRG.7759 Avicennia marina
Nitab4.5_0000014g0300 Nicotiana tabacum
Nitab4.5_0002806g0010 Nicotiana tabacum
Nn3g17393 Nelumbo nucifera
Nn4g23365 Nelumbo nucifera
Nn4g23367 Nelumbo nucifera
Nn4g23368 Nelumbo nucifera
Os07g0111600 Oryza sativa ssp. japonica
Peaxi162Scf00187g01610 Petunia axillaris
PGR102G1709 Punica granatum
PGSC0003DMG400002845 Solanum tuberosum
Phvul.002G168300 Phaseolus vulgaris
Potri.010G160500 Populus trichocarpa
Pp3c17_10460 Physcomitrium patens
Pp3c1_25680 Physcomitrium patens
Pp3c6_25300 Physcomitrium patens
Prupe.1G283200 Prunus persica
Psat7g135320 Pisum sativum
PSO170G0523 Papaver somniferum
PSO339G5525 Papaver somniferum
PSO384G1005 Papaver somniferum
QL03p070752 Quercus lobata
QL03p070789 Quercus lobata
QL03p071066 Quercus lobata
QL03p071143 Quercus lobata
RcHm_v2.0_Chr4g0438691 Rosa chinensis
Rhsim12G0134700 Rhododendron simsii
Sabra10G0122100 Salix brachista
SalBow3G3853 Salvia bowleyana
Sc04g0007710 Simmondsia chinensis
Sed0011671 Sechium edule
SEGI_09072 Sequoiadendron giganteum
SEGI_11926 Sequoiadendron giganteum
SEGI_12436 Sequoiadendron giganteum
SEGI_15475 Sequoiadendron giganteum
SEGI_23176 Sequoiadendron giganteum
SEGI_28592 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14439 Striga asiatica
SMO200G0252 Selaginella moellendorffii
Solyc04g005450.3 Solanum lycopersicum
Sopen04g001450 Solanum pennellii
Sp1g12060 Schrenkiella parvula
Sp2g14370 Schrenkiella parvula
TAR622G0508 Trochodendron aralioides
THA.LOC104801818 Tarenaya hassleriana
Thecc.02G334800 Theobroma cacao
Thhalv10003799m.g Eutrema salsugineum
Thhalv10007019m.g Eutrema salsugineum
TPR.G5011 Trifolium pratense
TWI75G0879 Tripterygium wilfordii
TWI79G0748 Tripterygium wilfordii
unitig_8.g3456 Utricularia gibba
vmacro16374 Vaccinium macrocarpon
vmacro23252 Vaccinium macrocarpon
VMungo0251G2277 Vigna mungo
Zm00001eb298570 Zea mays

User provided reference genes

Program Settings