Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG11G3940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1240 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.1242 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.369 Anthoceros agrestis
Actinidia00209 Actinidia chinensis
Actinidia04532 Actinidia chinensis
Actinidia17473 Actinidia chinensis
Actinidia24676 Actinidia chinensis
Actinidia39043 Actinidia chinensis
Actinidia39044 Actinidia chinensis
Ah.03g137090 Amaranthus hybridus
AL6G36300 Arabidopsis lyrata
Aqoxy6G00170 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.57R94V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RA8HQM Arachis hypogaea
AT5G24690 Arabidopsis thaliana
ATR0626G335 Amborella trichopoda
Atru.chr4.59 Acer truncatum
AUR62014267 Chenopodium quinoa
AUR62029115 Chenopodium quinoa
AUR62033129 Chenopodium quinoa
AUR62042719 Chenopodium quinoa
BcaNung01251 Brassica carinata
C09p07150 Brassica napus
CAN.G1577.11 Capsicum annuum
CANSAT11G0269 Cannabis sativa
CARHR188780 Cardamine hirsuta
Carub.0006s2255 Capsella rubella
Ca_01805_v3 Cicer arietinum L.
CBR_g4430 Chara braunii
Cc02_g22420 Coffea canephora
CDE01G0126 Ceratophyllum demersum
CDE01G0358 Ceratophyllum demersum
CDE12G0288 Ceratophyllum demersum
CiPaw.05G043700 Carya illinoinensis
CiPaw.06G148000 Carya illinoinensis
ClCG09G014350 Citrullus lanatus
COL.COLO4_17875 Corchorus olitorius
Cpa.g.sc113.67 Carica papaya
Cre09.g387000 Chlamydomonas reinhardtii
CsaV3_6G037380 Cucumis sativus L.
CSS0006387 Camellia sinensis var. sinensis
CSS0045081 Camellia sinensis var. sinensis
DCAR_013989 Daucus carota
Dinv24268 Davidia involucrata
Duzib052G0369 Durio zibethinus
Duzib132G0873 Durio zibethinus
ECA240G0862 Erigeron canadensis
EL10Ac6g14070 Beta vulgaris
Eucgr.G00606 Eucalyptus grandis
FAN04G1222 Fragaria x ananassa
FAN08G3228 Fragaria x ananassa
FAN13G2755 Fragaria x ananassa
FAN18G2310 Fragaria x ananassa
FvH4_5g29610 Fragaria vesca
Glyma.08G185500 Glycine max
Glyma.15G047200 Glycine max
Gohir.A03G211300 Gossypium hirsutum
Gohir.A12G032100 Gossypium hirsutum
Gohir.D02G232900 Gossypium hirsutum
Gohir.D12G040200 Gossypium hirsutum
Gorai.005G260700 Gossypium raimondii
Gorai.008G041900 Gossypium raimondii
GSVIVG01022976001 Vitis vinifera
GSVIVG01022980001 Vitis vinifera
HanXRQChr03g0066801 Helianthus annuus
HanXRQChr06g0185081 Helianthus annuus
Haze_01662 Corylus avellana
Haze_01689 Corylus avellana
Haze_01695 Corylus avellana
Hma1.2p1_0179F.1_g079410 Hydrangea macrophylla
Hma1.2p1_0323F.1_g125170 Hydrangea macrophylla
Hma1.2p1_3753F.1_g337500 Hydrangea macrophylla
HPP92_010826 Vanilla planifolia
Hund15513 Selenicereus undatus
Lalb_Chr07g0185721 Lupinus albus
Lalb_Chr12g0204431 Lupinus albus
Lalb_Chr13g0295731 Lupinus albus
Lj5A251T71 Lonicera japonica
Lj6g0021954 Lotus japonicus
Lsat_1_v5_gn_9_118341 Lactuca sativa
Manes.07G015100 Manihot esculenta
Manes.10G130100 Manihot esculenta
Mapoly0047s0079 Marchantia polymorpha
MBI04_g04857_MAGBIO Magnolia biondii
MBI04_g44264_MAGBIO Magnolia biondii
MCO11G267 Micromonas commoda
MD08G1228000 Malus domestica
MD15G1422000 Malus domestica
Medtr2g081000 Medicago truncatula
MELO3C014379.2 Cucumis melo
Migut.B00843 Erythranthe guttata
MSTRG.16525 Avicennia marina
Nitab4.5_0000329g0040 Nicotiana tabacum
Nitab4.5_0001706g0060 Nicotiana tabacum
Nitab4.5_0002245g0100 Nicotiana tabacum
Nitab4.5_0010875g0020 Nicotiana tabacum
Nitab4.5_0011195g0020 Nicotiana tabacum
Nitab4.5_0024486g0010 Nicotiana tabacum
Oeu008886.2 Olea europaea
Oeu012748.1 Olea europaea
Os12g0283800 Oryza sativa ssp. japonica
Peaxi162Scf00011g00362 Petunia axillaris
PGR042G1879 Punica granatum
PGR142G2391 Punica granatum
PGSC0003DMG400023789 Solanum tuberosum
Phvul.006G213600 Phaseolus vulgaris
Potri.001G210500 Populus trichocarpa
Potri.003G019600 Populus trichocarpa
Pp3c16_21290 Physcomitrium patens
Pp3c25_13880 Physcomitrium patens
Pp3c5_27350 Physcomitrium patens
Pp3c6_100 Physcomitrium patens
Pp3c6_102 Physcomitrium patens
PRCOL_00006290 Prasinoderma coloniale
Prupe.1G567400 Prunus persica
Psat5g246640 Pisum sativum
PSO170G6572 Papaver somniferum
PSO782G4069 Papaver somniferum
QL04p096640 Quercus lobata
QL04p096674 Quercus lobata
QL04p096680 Quercus lobata
QL04p096712 Quercus lobata
QL04p096840 Quercus lobata
QL10p026162 Quercus lobata
RcHm_v2.0_Chr7g0222671 Rosa chinensis
Rhsim11G0129800 Rhododendron simsii
Sabra01G0162600 Salix brachista
Sabra03G0011100 Salix brachista
SalBow5G4543 Salvia bowleyana
SalBow6G3826 Salvia bowleyana
SalBow6G5703 Salvia bowleyana
Sc03g0005930 Simmondsia chinensis
Sc03g0006070 Simmondsia chinensis
Sed0012766 Sechium edule
Sed0014676 Sechium edule
SGA_v2.0_scaffold1G00310 Striga asiatica
SMO141G0185 Selaginella moellendorffii
Solyc01g104270.4 Solanum lycopersicum
Solyc10g045630.2 Solanum lycopersicum
Sopen01g046710 Solanum pennellii
Sopen10g015980 Solanum pennellii
Sp2g22710 Schrenkiella parvula
TAR381G0217 Trochodendron aralioides
TAR628G0747 Trochodendron aralioides
THA.LOC104798997 Tarenaya hassleriana
THA.LOC104803318 Tarenaya hassleriana
Thecc.02G039300 Theobroma cacao
Thhalv10003985m.g Eutrema salsugineum
TPR.G15461 Trifolium pratense
TWI14G0624 Tripterygium wilfordii
TWI59G1197 Tripterygium wilfordii
unitig_578.g16342 Utricularia gibba
unitig_8.g4525 Utricularia gibba
vmacro01764 Vaccinium macrocarpon
vmacro19899 Vaccinium macrocarpon
VMungo0540G0447 Vigna mungo
Zm00001eb132890 Zea mays
Zm00001eb409840 Zea mays

User provided reference genes

Program Settings