Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p55650 Brassica napus
Aa31LG9G14170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.475 Anthoceros agrestis
Actinidia15207 Actinidia chinensis
Actinidia21272 Actinidia chinensis
Ah.04g163390 Amaranthus hybridus
Ah.04g163400 Amaranthus hybridus
AL8G27030 Arabidopsis lyrata
Aqoxy6G00296 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8W34DS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX6LT2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TVXF2I Arachis hypogaea
AT5G52560 Arabidopsis thaliana
ATR1001G002 Amborella trichopoda
Atru.chr13.1591 Acer truncatum
AUR62007701 Chenopodium quinoa
AUR62013439 Chenopodium quinoa
AUR62013440 Chenopodium quinoa
BcaB08g35185 Brassica carinata
BcaB08g36106 Brassica carinata
BcaC07g40866 Brassica carinata
BolC8t51435H Brassica oleracea
BraA09t40966Z Brassica rapa
C08p38640 Brassica napus
CAN.G405.5 Capsicum annuum
CANSAT25G3797 Cannabis sativa
CARHR265560 Cardamine hirsuta
Carub.0008s1270 Capsella rubella
Ca_16614_v3 Cicer arietinum L.
CBR_g38016 Chara braunii
Cc10_g13640 Coffea canephora
CDE06G0343 Ceratophyllum demersum
CDE06G1518 Ceratophyllum demersum
CDE07G0325 Ceratophyllum demersum
Cfa018421 Carpinus fangiana
Ciclev10000592m.g Citrus clementina
CiPaw.15G030800 Carya illinoinensis
CiPaw.16G022400 Carya illinoinensis
ClCG08G006050 Citrullus lanatus
Cpa.g.c44850 Carica papaya
Cpa.g.sc64.151 Carica papaya
Cre14.g621751 Chlamydomonas reinhardtii
CsaV3_6G034020 Cucumis sativus L.
CSS0005980 Camellia sinensis var. sinensis
DCAR_003592 Daucus carota
Dinv14704 Davidia involucrata
Dinv27262 Davidia involucrata
Dinv27263 Davidia involucrata
Duzib093G0036 Durio zibethinus
Duzib116G0462 Durio zibethinus
Duzib213G0704 Durio zibethinus
ECA233G3807 Erigeron canadensis
ECA238G0374 Erigeron canadensis
EL10Ac1g01366 Beta vulgaris
Eucgr.F03856 Eucalyptus grandis
FAN15G2696 Fragaria x ananassa
FAN15G2766 Fragaria x ananassa
FAN20G1489 Fragaria x ananassa
FAN24G0605 Fragaria x ananassa
FAN27G3503 Fragaria x ananassa
FvH4_2g28000 Fragaria vesca
Glyma.04G245100 Glycine max
Glyma.06G118100 Glycine max
Gohir.A02G111000 Gossypium hirsutum
Gohir.A05G238300 Gossypium hirsutum
Gohir.A08G221616 Gossypium hirsutum
Gohir.A10G100400 Gossypium hirsutum
Gohir.D02G077650 Gossypium hirsutum
Gohir.D03G063000 Gossypium hirsutum
Gohir.D08G239084 Gossypium hirsutum
Gorai.004G254500 Gossypium raimondii
Gorai.005G087200 Gossypium raimondii
Gorai.013G108400 Gossypium raimondii
GSVIVG01008799001 Vitis vinifera
HanXRQChr02g0055521 Helianthus annuus
HanXRQChr14g0452241 Helianthus annuus
Haze_17642 Corylus avellana
Hma1.2p1_0349F.1_g132280 Hydrangea macrophylla
Hma1.2p1_0880F.1_g231850 Hydrangea macrophylla
Hma1.2p1_2689F.1_g326990 Hydrangea macrophylla
HPP92_005775 Vanilla planifolia
HPP92_005816 Vanilla planifolia
HPP92_005823 Vanilla planifolia
HPP92_009336 Vanilla planifolia
HPP92_009371 Vanilla planifolia
Hund17352 Selenicereus undatus
Hund26745 Selenicereus undatus
Hund26746 Selenicereus undatus
Lalb_Chr23g0271201 Lupinus albus
Lj1g0006497 Lotus japonicus
Lj4A674G55 Lonicera japonica
Lj4C664G15 Lonicera japonica
Lj7C351T8 Lonicera japonica
Lsat_1_v5_gn_2_99200 Lactuca sativa
Lsat_1_v5_gn_6_43121 Lactuca sativa
Lsat_1_v5_gn_9_125000 Lactuca sativa
Manes.02G169300 Manihot esculenta
Manes.18G083251 Manihot esculenta
Mapoly0020s0171 Marchantia polymorpha
MBI19_g18107_MAGBIO Magnolia biondii
MCO16G082 Micromonas commoda
MD15G1133100 Malus domestica
Medtr3g088650 Medicago truncatula
MELO3C008467.2 Cucumis melo
Migut.C01079 Erythranthe guttata
MSTRG.1402 Avicennia marina
MSTRG.25350 Avicennia marina
Nitab4.5_0000317g0080 Nicotiana tabacum
Nitab4.5_0002557g0050 Nicotiana tabacum
Nn5g28450 Nelumbo nucifera
Oeu045951.3 Olea europaea
Oeu047171.1 Olea europaea
Os06g0701200 Oryza sativa ssp. japonica
Peaxi162Scf00066g00527 Petunia axillaris
Peaxi162Scf00946g00016 Petunia axillaris
PGR042G0897 Punica granatum
PGSC0003DMG400023024 Solanum tuberosum
Phvul.009G130500 Phaseolus vulgaris
Potri.002G077400 Populus trichocarpa
Pp3c14_26160 Physcomitrium patens
Pp3c7_22840 Physcomitrium patens
PRCOL_00000078 Prasinoderma coloniale
Prupe.1G488700 Prunus persica
Psat5g084360 Pisum sativum
PSO541G1755 Papaver somniferum
PSO675G4690 Papaver somniferum
PSO724G0104 Papaver somniferum
PSO729G0087 Papaver somniferum
RcHm_v2.0_Chr6g0296821 Rosa chinensis
Rhsim11G0072300 Rhododendron simsii
Sabra02G0060800 Salix brachista
SalBow7G3728 Salvia bowleyana
Sc26g0002830 Simmondsia chinensis
Sed0012376 Sechium edule
Sed0021205 Sechium edule
Sed0024885 Sechium edule
SEGI_17681 Sequoiadendron giganteum
SEGI_41147 Sequoiadendron giganteum
SGA_v2.0_scaffold52G18908 Striga asiatica
SGA_v2.0_scaffold7G03728 Striga asiatica
SHI09238 Sapria himalayana
SMO144G0039 Selaginella moellendorffii
Solyc04g058070.3 Solanum lycopersicum
Sopen04g025940 Solanum pennellii
Sopen04g025970 Solanum pennellii
Sp4g04790 Schrenkiella parvula
TAR381G1357 Trochodendron aralioides
TAR625G0293 Trochodendron aralioides
Thecc.08G133900 Theobroma cacao
Thhalv10000457m.g Eutrema salsugineum
TPR.G6326 Trifolium pratense
TWI34G0939 Tripterygium wilfordii
TWI60G0549 Tripterygium wilfordii
unitig_748.g7692 Utricularia gibba
vmacro00869 Vaccinium macrocarpon
VMungo1309G1545 Vigna mungo
Zm00001eb215830 Zea mays
Zm00001eb226930 Zea mays
Zm00001eb237030 Zea mays
Zm00001eb272890 Zea mays

User provided reference genes

Program Settings