Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08690 Brassica napus
A05p39260 Brassica napus
A08p19690 Brassica napus
A10p13960 Brassica napus
Aa31LG2G21090 Aethionema arabicum
Aa31LG3G12450 Aethionema arabicum
Actinidia17511 Actinidia chinensis
Actinidia32646 Actinidia chinensis
Actinidia39774 Actinidia chinensis
Ah.09g230530 Amaranthus hybridus
AL7G23070 Arabidopsis lyrata
AL8G32410 Arabidopsis lyrata
Aqoxy7G03974 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0571R5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y1E6HX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y31L4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y75GMV Arachis hypogaea
AT4G29360 Arabidopsis thaliana
AT5G56590 Arabidopsis thaliana
ATR0705G040 Amborella trichopoda
Atru.chr7.1483 Acer truncatum
AUR62010875 Chenopodium quinoa
AUR62021388 Chenopodium quinoa
BcaB03g12606 Brassica carinata
BcaC01g01169 Brassica carinata
BcaC04g20070 Brassica carinata
BcaC09g51718 Brassica carinata
BcaNung05797 Brassica carinata
BolC1t00975H Brassica oleracea
BolC3t21241H Brassica oleracea
BolC9t57670H Brassica oleracea
BraA01t00818Z Brassica rapa
BraA08t33927Z Brassica rapa
BraA10t43487Z Brassica rapa
C01p10220 Brassica napus
C03p89310 Brassica napus
C09p48200 Brassica napus
CAN.G1858.1 Capsicum annuum
CAN.G1964.2 Capsicum annuum
CANSAT56G2403 Cannabis sativa
CARHR237150 Cardamine hirsuta
CARHR270280 Cardamine hirsuta
Carub.0007s1120 Capsella rubella
Carub.0008s1707 Capsella rubella
Ca_17370_v3 Cicer arietinum L.
Ca_25589_v3 Cicer arietinum L.
CBR_g40325 Chara braunii
Cc06_g10640 Coffea canephora
CDE05G0553 Ceratophyllum demersum
Cfa003162 Carpinus fangiana
Ciclev10008080m.g Citrus clementina
CiPaw.03G222400 Carya illinoinensis
ClCG03G016030 Citrullus lanatus
COL.COLO4_34720 Corchorus olitorius
Cpa.g.sc78.32 Carica papaya
CsaV3_1G039930 Cucumis sativus L.
CSS0013009 Camellia sinensis var. sinensis
DCAR_010687 Daucus carota
DCAR_028649 Daucus carota
Dinv36719 Davidia involucrata
Dinv42261 Davidia involucrata
Duzib150G0975 Durio zibethinus
Duzib168G0627 Durio zibethinus
Duzib187G1237 Durio zibethinus
ECA240G0164 Erigeron canadensis
EL10Ac8g18364 Beta vulgaris
Eucgr.C03710 Eucalyptus grandis
FAN19G2278 Fragaria x ananassa
FAN23G0751 Fragaria x ananassa
FAN26G2847 Fragaria x ananassa
FAN28G1588 Fragaria x ananassa
FvH4_1g06440 Fragaria vesca
Glyma.05G225800 Glycine max
Glyma.08G032700 Glycine max
Gohir.A05G026450 Gossypium hirsutum
Gohir.A06G068200 Gossypium hirsutum
Gohir.A08G243500 Gossypium hirsutum
Gohir.D05G028000 Gossypium hirsutum
Gohir.D05G028200 Gossypium hirsutum
Gohir.D05G028300 Gossypium hirsutum
Gohir.D06G066800 Gossypium hirsutum
Gohir.D08G264400 Gossypium hirsutum
Gorai.004G282300 Gossypium raimondii
Gorai.009G028200 Gossypium raimondii
Gorai.009G028300 Gossypium raimondii
Gorai.010G078300 Gossypium raimondii
GSVIVG01015282001 Vitis vinifera
HanXRQChr03g0061071 Helianthus annuus
HanXRQChr09g0238851 Helianthus annuus
Haze_25839 Corylus avellana
Hma1.2p1_0012F.1_g007430 Hydrangea macrophylla
Hma1.2p1_0663F.1_g198410 Hydrangea macrophylla
HPP92_005559 Vanilla planifolia
Hund26289 Selenicereus undatus
Lalb_Chr05g0223311 Lupinus albus
Lalb_Chr09g0331591 Lupinus albus
Lalb_Chr22g0352481 Lupinus albus
Lj2g0013590 Lotus japonicus
Lj4g0019988 Lotus japonicus
Lj7C667T8 Lonicera japonica
Lsat_1_v5_gn_7_39521 Lactuca sativa
Manes.03G028200 Manihot esculenta
Manes.16G107700 Manihot esculenta
Mapoly0059s0025 Marchantia polymorpha
MD15G1199400 Malus domestica
Medtr6g088885 Medicago truncatula
Medtr8g102340 Medicago truncatula
MELO3C015424.2 Cucumis melo
Migut.K00550 Erythranthe guttata
MSTRG.26392 Avicennia marina
Nitab4.5_0000566g0230 Nicotiana tabacum
Nitab4.5_0003079g0040 Nicotiana tabacum
Nn6g35347 Nelumbo nucifera
Nn8g39035 Nelumbo nucifera
Oeu000343.3 Olea europaea
Oeu021458.1 Olea europaea
Os01g0739700 Oryza sativa ssp. japonica
Peaxi162Scf00944g00136 Petunia axillaris
PGR102G1121 Punica granatum
PGSC0003DMG400000354 Solanum tuberosum
Phvul.002G307800 Phaseolus vulgaris
Potri.018G068600 Populus trichocarpa
Prupe.7G217800 Prunus persica
Psat1g048480 Pisum sativum
Psat7g018080 Pisum sativum
PSO210G3082 Papaver somniferum
PSO210G5316 Papaver somniferum
QL02p040807 Quercus lobata
RcHm_v2.0_Chr2g0092181 Rosa chinensis
Rhsim05G0027600 Rhododendron simsii
Sabra18G0060300 Salix brachista
SalBow1G0099 Salvia bowleyana
Sc08g0008080 Simmondsia chinensis
Sed0000017 Sechium edule
Sed0018420 Sechium edule
SEGI_01232 Sequoiadendron giganteum
SEGI_18415 Sequoiadendron giganteum
SEGI_21096 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08720 Striga asiatica
SHI02640 Sapria himalayana
SMO358G0225 Selaginella moellendorffii
Solyc12g008580.2 Solanum lycopersicum
Sopen12g003520 Solanum pennellii
Sp6g18370 Schrenkiella parvula
Sp7g27240 Schrenkiella parvula
TAR383G0875 Trochodendron aralioides
TAR626G0366 Trochodendron aralioides
THA.LOC104814592 Tarenaya hassleriana
THA.LOC104817741 Tarenaya hassleriana
Thecc.09G098500 Theobroma cacao
Thhalv10013309m.g Eutrema salsugineum
Thhalv10024870m.g Eutrema salsugineum
TPR.G23472 Trifolium pratense
TPR.G33491 Trifolium pratense
TWI32G0807 Tripterygium wilfordii
TWI63G0349 Tripterygium wilfordii
unitig_0.g776 Utricularia gibba
vmacro10843 Vaccinium macrocarpon
VMungo0251G1615 Vigna mungo
Zm00001eb153770 Zea mays

User provided reference genes

Program Settings