Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00590 Brassica napus
A09p59050 Brassica napus
Aa31LG8G17020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2975 Anthoceros agrestis
Actinidia22115 Actinidia chinensis
Actinidia30586 Actinidia chinensis
Ah.08g214470 Amaranthus hybridus
AL3G48030 Arabidopsis lyrata
Aqoxy1G03506 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8Y4J32 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9NX2S Arachis hypogaea
AT2G20060 Arabidopsis thaliana
ATR0307G084 Amborella trichopoda
Atru.chr10.2278 Acer truncatum
AUR62001111 Chenopodium quinoa
AUR62008935 Chenopodium quinoa
BcaB03g16800 Brassica carinata
BcaB03g16804 Brassica carinata
BcaB06g28897 Brassica carinata
BcaB08g34896 Brassica carinata
BcaC06g36686 Brassica carinata
BcaC07g41228 Brassica carinata
BolC7t40544H Brassica oleracea
BolC8t51793H Brassica oleracea
BraA07t27855Z Brassica rapa
BraA09t41289Z Brassica rapa
C07p01050 Brassica napus
C08p42330 Brassica napus
CAN.G1194.11 Capsicum annuum
CAN.G1194.12 Capsicum annuum
CARHR110570 Cardamine hirsuta
Carub.0003s3434 Capsella rubella
Ca_00691_v3 Cicer arietinum L.
CBR_g40797 Chara braunii
Cc10_g04660 Coffea canephora
Cc10_g04670 Coffea canephora
CDE03G0208 Ceratophyllum demersum
CDE06G0724 Ceratophyllum demersum
Cfa000163 Carpinus fangiana
Ciclev10017963m.g Citrus clementina
CiPaw.09G097700 Carya illinoinensis
CiPaw.10G074300 Carya illinoinensis
ClCG01G021700 Citrullus lanatus
COL.COLO4_31830 Corchorus olitorius
Cpa.g.sc152.55 Carica papaya
Cre12.g520400 Chlamydomonas reinhardtii
CsaV3_6G048740 Cucumis sativus L.
CSS0021903 Camellia sinensis var. sinensis
CSS0044102 Camellia sinensis var. sinensis
DCAR_002834 Daucus carota
DCAR_019438 Daucus carota
Dinv12378 Davidia involucrata
Duzib192G0217 Durio zibethinus
ECA236G1813 Erigeron canadensis
EL10Ac7g17869 Beta vulgaris
Eucgr.G00454 Eucalyptus grandis
Eucgr.G01692 Eucalyptus grandis
FAN21G0257 Fragaria x ananassa
FAN21G3530 Fragaria x ananassa
FAN25G3034 Fragaria x ananassa
FvH4_3g01410 Fragaria vesca
FvH4_3g43720 Fragaria vesca
FvH4_3g43740 Fragaria vesca
Glyma.09G007300 Glycine max
Glyma.15G111700 Glycine max
Gohir.A05G173000 Gossypium hirsutum
Gohir.A06G150933 Gossypium hirsutum
Gohir.D05G176000 Gossypium hirsutum
Gohir.D06G157201 Gossypium hirsutum
Gorai.009G181400 Gossypium raimondii
Gorai.010G183700 Gossypium raimondii
GSVIVG01004810001 Vitis vinifera
HanXRQChr01g0014371 Helianthus annuus
Haze_06856 Corylus avellana
Haze_26885 Corylus avellana
Hma1.2p1_0226F.1_g095780 Hydrangea macrophylla
HPP92_018530 Vanilla planifolia
Hund00398 Selenicereus undatus
Lalb_Chr20g0118931 Lupinus albus
Lalb_Chr20g0118941 Lupinus albus
Lj4A769T44 Lonicera japonica
Lj6g0022899 Lotus japonicus
Lsat_1_v5_gn_2_18501 Lactuca sativa
Lsat_1_v5_gn_4_51441 Lactuca sativa
Lsat_1_v5_gn_7_66500 Lactuca sativa
Manes.16G003100 Manihot esculenta
Mapoly0162s0019 Marchantia polymorpha
MBI05_g10534_MAGBIO Magnolia biondii
MBI05_g23392_MAGBIO Magnolia biondii
MCO02G150 Micromonas commoda
MD05G1352400 Malus domestica
MD10G1326400 Malus domestica
Medtr3g107920 Medicago truncatula
MELO3C007416.2 Cucumis melo
Migut.L00082 Erythranthe guttata
Migut.N02747 Erythranthe guttata
Migut.O00819 Erythranthe guttata
MSTRG.1068 Avicennia marina
MSTRG.25075 Avicennia marina
Nitab4.5_0000678g0090 Nicotiana tabacum
Nitab4.5_0002335g0060 Nicotiana tabacum
Nitab4.5_0002335g0080 Nicotiana tabacum
Nitab4.5_0003290g0070 Nicotiana tabacum
Nitab4.5_0003501g0040 Nicotiana tabacum
Nitab4.5_0003508g0010 Nicotiana tabacum
Nitab4.5_0003603g0020 Nicotiana tabacum
Nitab4.5_0004376g0020 Nicotiana tabacum
Nitab4.5_0006174g0030 Nicotiana tabacum
Nitab4.5_0006802g0080 Nicotiana tabacum
Nitab4.5_0014148g0010 Nicotiana tabacum
Nn1g07269 Nelumbo nucifera
Oeu012435.1 Olea europaea
Oeu023826.3 Olea europaea
Os11g0585700 Oryza sativa ssp. japonica
Peaxi162Scf01027g00012 Petunia axillaris
Peaxi162Scf01073g00117 Petunia axillaris
PGR004G1068 Punica granatum
PGSC0003DMG400015407 Solanum tuberosum
Phvul.006G146000 Phaseolus vulgaris
Phvul.010G046600 Phaseolus vulgaris
Potri.004G004800 Populus trichocarpa
Pp3c13_15330 Physcomitrium patens
PRCOL_00001012 Prasinoderma coloniale
Prupe.2G035900 Prunus persica
Prupe.4G015300 Prunus persica
Psat5g077520 Pisum sativum
PSO063G2973 Papaver somniferum
PSO782G1961 Papaver somniferum
QL03p004896 Quercus lobata
QL05p071977 Quercus lobata
RcHm_v2.0_Chr5g0002131 Rosa chinensis
RcHm_v2.0_Chr5g0078391 Rosa chinensis
Rhsim04G0075200 Rhododendron simsii
Rhsim04G0075400 Rhododendron simsii
Sabra04G0002500 Salix brachista
SalBow7G0488 Salvia bowleyana
SalBow7G1927 Salvia bowleyana
Sc16g0006660 Simmondsia chinensis
Sed0005973 Sechium edule
Sed0027185 Sechium edule
SGA_v2.0_scaffold404G51008 Striga asiatica
SGA_v2.0_scaffold543G52819 Striga asiatica
SHI04147 Sapria himalayana
SMO116G0021 Selaginella moellendorffii
Solyc10g047150.3 Solanum lycopersicum
Solyc12g088730.2 Solanum lycopersicum
Sopen12g030630 Solanum pennellii
Sp3g33370 Schrenkiella parvula
TAR626G0623 Trochodendron aralioides
TAR629G1518 Trochodendron aralioides
THA.LOC104809478 Tarenaya hassleriana
THA.LOC104823539 Tarenaya hassleriana
Thecc.06G227900 Theobroma cacao
Thhalv10002043m.g Eutrema salsugineum
TPR.G34683 Trifolium pratense
TWI38G0690 Tripterygium wilfordii
TWI63G0777 Tripterygium wilfordii
unitig_37.g12949 Utricularia gibba
vmacro09207 Vaccinium macrocarpon
VMungo0540G2306 Vigna mungo
Zm00001eb061360 Zea mays

User provided reference genes

Program Settings