Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p07480 Brassica napus
Aa31LG11G13650 Aethionema arabicum
Aa31LG2G6740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.875 Anthoceros agrestis
Actinidia24035 Actinidia chinensis
Actinidia30172 Actinidia chinensis
Aqoxy7G03268 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5E9M75 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8KG9MP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5A4WZ Arachis hypogaea
ATR0580G204 Amborella trichopoda
Atru.chr8.734 Acer truncatum
BcaB01g05013 Brassica carinata
BcaB03g15415 Brassica carinata
BcaC01g04446 Brassica carinata
BcaC02g11753 Brassica carinata
BcaC04g18922 Brassica carinata
BcaC05g25596 Brassica carinata
BcaC05g26366 Brassica carinata
BcaC05g30356 Brassica carinata
BcaC05g30359 Brassica carinata
BcaC08g42943 Brassica carinata
BolC3t13368H Brassica oleracea
BolC3t16271H Brassica oleracea
BolC4t22820H Brassica oleracea
BolC5t31135H Brassica oleracea
BolC5t35081H Brassica oleracea
BolC6t35314H Brassica oleracea
BolC6t38460H Brassica oleracea
BraA03t10077Z Brassica rapa
BraA09t40484Z Brassica rapa
BraA10t44380Z Brassica rapa
C01p09590 Brassica napus
C03p08680 Brassica napus
C04p11730 Brassica napus
C05p14360 Brassica napus
C05p24080 Brassica napus
C06p01860 Brassica napus
C06p33460 Brassica napus
CAN.G184.34 Capsicum annuum
CAN.G48.22 Capsicum annuum
CARHR076440 Cardamine hirsuta
CARHR197360 Cardamine hirsuta
Carub.0003s0156 Capsella rubella
Carub.0005s0332 Capsella rubella
Carub.0006s1414 Capsella rubella
Cc07_g04850 Coffea canephora
Cc11_g11120 Coffea canephora
CDE07G0496 Ceratophyllum demersum
Cfa010145 Carpinus fangiana
Ciclev10010716m.g Citrus clementina
Ciclev10013834m.g Citrus clementina
CiPaw.03G007300 Carya illinoinensis
CiPaw.04G005200 Carya illinoinensis
CiPaw.06G097100 Carya illinoinensis
CiPaw.15G163200 Carya illinoinensis
ClCG05G011880 Citrullus lanatus
Cpa.g.sc53.16 Carica papaya
Cpa.g.sc70.17 Carica papaya
Cpa.g.sc718.1 Carica papaya
CsaV3_2G007760 Cucumis sativus L.
CsaV3_3G020550 Cucumis sativus L.
CSS0024970 Camellia sinensis var. sinensis
CSS0025095 Camellia sinensis var. sinensis
CSS0036603 Camellia sinensis var. sinensis
CSS0041318 Camellia sinensis var. sinensis
Dinv27410 Davidia involucrata
Dinv33898 Davidia involucrata
EL10Ac2g04650 Beta vulgaris
Eucgr.J01448 Eucalyptus grandis
FAN02G3078 Fragaria x ananassa
FAN05G4080 Fragaria x ananassa
FAN07G0329 Fragaria x ananassa
FAN09G0163 Fragaria x ananassa
FAN14G4322 Fragaria x ananassa
FAN17G0115 Fragaria x ananassa
FvH4_4g28640 Fragaria vesca
Glyma.01G071400 Glycine max
Glyma.02G128100 Glycine max
Glyma.08G255850 Glycine max
Glyma.18G278850 Glycine max
Gohir.A03G108166 Gossypium hirsutum
Gohir.A05G007400 Gossypium hirsutum
Gohir.A08G035700 Gossypium hirsutum
Gohir.A13G095100 Gossypium hirsutum
Gohir.D02G133300 Gossypium hirsutum
Gohir.D05G008300 Gossypium hirsutum
Gohir.D08G046400 Gossypium hirsutum
Gohir.D13G089300 Gossypium hirsutum
Gorai.005G149200 Gossypium raimondii
GSVIVG01023708001 Vitis vinifera
Haze_11816 Corylus avellana
Haze_14083 Corylus avellana
Haze_19064 Corylus avellana
Haze_19070 Corylus avellana
HPP92_018339 Vanilla planifolia
HPP92_018539 Vanilla planifolia
Hund26423 Selenicereus undatus
Lalb_Chr04g0255261 Lupinus albus
Lalb_Chr10g0099471 Lupinus albus
Lalb_Chr17g0336661 Lupinus albus
Lalb_Chr17g0341711 Lupinus albus
Lalb_Chr21g0318051 Lupinus albus
Lj1g0021287 Lotus japonicus
Lj2g0000747 Lotus japonicus
Lj4C128G17 Lonicera japonica
Lju237C1T16 Lonicera japonica
Manes.01G106700 Manihot esculenta
Manes.02G063600 Manihot esculenta
Manes.14G094100 Manihot esculenta
Manes.14G114200 Manihot esculenta
Mapoly0001s0544 Marchantia polymorpha
MBI14_g04840_MAGBIO Magnolia biondii
MBI14_g36371_MAGBIO Magnolia biondii
MBI15_g07488_MAGBIO Magnolia biondii
MD09G1079900 Malus domestica
MD17G1070400 Malus domestica
Medtr0076s0010 Medicago truncatula
MELO3C023786.2 Cucumis melo
Migut.H00559 Erythranthe guttata
Migut.L01129 Erythranthe guttata
Nitab4.5_0004508g0030 Nicotiana tabacum
Nitab4.5_0013699g0020 Nicotiana tabacum
Nn2g12502 Nelumbo nucifera
Nn4g23620 Nelumbo nucifera
Oeu027423.1 Olea europaea
Phvul.003G044300 Phaseolus vulgaris
Phvul.008G022200 Phaseolus vulgaris
Potri.004G106750 Populus trichocarpa
Potri.010G133850 Populus trichocarpa
Potri.017G108901 Populus trichocarpa
Potri.018G101400 Populus trichocarpa
Pp3c15_18510 Physcomitrium patens
Prupe.1G299600 Prunus persica
Prupe.3G243800 Prunus persica
RcHm_v2.0_Chr1g0350481 Rosa chinensis
RcHm_v2.0_Chr2g0163951 Rosa chinensis
RcHm_v2.0_Chr4g0436751 Rosa chinensis
RcHm_v2.0_Chr7g0221071 Rosa chinensis
Rhsim01G0021000 Rhododendron simsii
Sabra17G0091400 Salix brachista
Sc15g0002360 Simmondsia chinensis
Sed0003314 Sechium edule
Sed0007821 Sechium edule
SGA_v2.0_scaffold14G06782 Striga asiatica
SHI33682 Sapria himalayana
SMO171G0109 Selaginella moellendorffii
Solyc02g150147.1 Solanum lycopersicum
Solyc05g010425.1 Solanum lycopersicum
TAR383G0646 Trochodendron aralioides
TAR622G0438 Trochodendron aralioides
TAR626G1302 Trochodendron aralioides
Thecc.02G316800 Theobroma cacao
Thecc.09G155600 Theobroma cacao
Thhalv10015839m.g Eutrema salsugineum
unitig_8.g3214 Utricularia gibba
vmacro01279 Vaccinium macrocarpon
vmacro05595 Vaccinium macrocarpon
vmacro13068 Vaccinium macrocarpon
vmacro18092 Vaccinium macrocarpon
Zm00001eb313410 Zea mays

User provided reference genes

Program Settings