Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p18760 Brassica napus
Aa31sc437G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5098 Anthoceros agrestis
Actinidia29922 Actinidia chinensis
Actinidia38471 Actinidia chinensis
AL4G21890 Arabidopsis lyrata
Aqoxy7G01056 Aquilegia oxysepala
Aqoxy7G01057 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0DN5L0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0TW07M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7BKR8 Arachis hypogaea
AT2G28020 Arabidopsis thaliana
AT2G28230 Arabidopsis thaliana
AT4G09070 Arabidopsis thaliana
ATR0598G338 Amborella trichopoda
Atru.chr7.1692 Acer truncatum
AUR62025186 Chenopodium quinoa
AUR62028988 Chenopodium quinoa
BcaB02g10157 Brassica carinata
BcaC02g10956 Brassica carinata
BcaC07g40291 Brassica carinata
BolC4t23831H Brassica oleracea
BolC8t51003H Brassica oleracea
BraA07t29585Z Brassica rapa
BraA09t40568Z Brassica rapa
C04p23290 Brassica napus
C08p34050 Brassica napus
CAN.G1774.14 Capsicum annuum
CAN.G1963.4 Capsicum annuum
CAN.G1963.7 Capsicum annuum
CAN.G2532.1 Capsicum annuum
CAN.G299.3 Capsicum annuum
CANSAT11G2059 Cannabis sativa
CARHR121150 Cardamine hirsuta
Carub.0004s0910 Capsella rubella
Carub.0004s0911 Capsella rubella
Carub.0006s2765 Capsella rubella
Ca_21314_v3 Cicer arietinum L.
CBR_g11153 Chara braunii
Cc06_g12020 Coffea canephora
CDE05G2440 Ceratophyllum demersum
Ciclev10012695m.g Citrus clementina
CiPaw.03G207800 Carya illinoinensis
ClCG11G001470 Citrullus lanatus
COL.COLO4_18112 Corchorus olitorius
Cpa.g.sc280.6 Carica papaya
Cre11.g476900 Chlamydomonas reinhardtii
CsaV3_2G001190 Cucumis sativus L.
CSS0005970 Camellia sinensis var. sinensis
DCAR_024738 Daucus carota
DCAR_024739 Daucus carota
DCAR_026438 Daucus carota
Dinv42376 Davidia involucrata
Duzib168G1760 Durio zibethinus
ECA233G5402 Erigeron canadensis
EL10Ac8g19111 Beta vulgaris
Eucgr.C00825 Eucalyptus grandis
FAN26G0729 Fragaria x ananassa
FAN26G1993 Fragaria x ananassa
FvH4_1g08420 Fragaria vesca
Glyma.13G109300 Glycine max
Glyma.17G050300 Glycine max
Gohir.A13G191300 Gossypium hirsutum
Gohir.D13G196700 Gossypium hirsutum
Gorai.013G225400 Gossypium raimondii
GSVIVG01015097001 Vitis vinifera
HanXRQChr09g0237811 Helianthus annuus
Haze_10270 Corylus avellana
Haze_25985 Corylus avellana
Haze_25993 Corylus avellana
Hma1.2p1_0928F.1_g237710 Hydrangea macrophylla
HPP92_009229 Vanilla planifolia
Hund08725 Selenicereus undatus
Lalb_Chr07g0181101 Lupinus albus
Lj4g0013364 Lotus japonicus
Lj7A685T53 Lonicera japonica
Lsat_1_v5_gn_7_35041 Lactuca sativa
Manes.03G199800 Manihot esculenta
Manes.15G009400 Manihot esculenta
Mapoly0097s0017 Marchantia polymorpha
MBI13_g11335_MAGBIO Magnolia biondii
MD02G1088400 Malus domestica
MD15G1215700 Malus domestica
MD15G1215800 Malus domestica
Medtr2g063927 Medicago truncatula
Medtr4g125510 Medicago truncatula
MELO3C004649.2 Cucumis melo
Migut.J00937 Erythranthe guttata
MSTRG.6002 Avicennia marina
Nitab4.5_0000073g0220 Nicotiana tabacum
Nitab4.5_0000073g0250 Nicotiana tabacum
Nitab4.5_0001866g0080 Nicotiana tabacum
Nitab4.5_0011363g0010 Nicotiana tabacum
Nn8g38685 Nelumbo nucifera
Oeu055661.2 Olea europaea
Os09g0443500 Oryza sativa ssp. japonica
Peaxi162Scf00928g00034 Petunia axillaris
PGR142G1966 Punica granatum
PGSC0003DMG400000323 Solanum tuberosum
PGSC0003DMG400003348 Solanum tuberosum
PGSC0003DMG400024425 Solanum tuberosum
PGSC0003DMG400027872 Solanum tuberosum
PGSC0003DMG400040125 Solanum tuberosum
Phvul.003G131900 Phaseolus vulgaris
Potri.005G126902 Populus trichocarpa
Potri.006G143400 Populus trichocarpa
Pp3c7_2780 Physcomitrium patens
Prupe.7G201200 Prunus persica
Psat0s2317g0240 Pisum sativum
Psat0s4474g0080 Pisum sativum
Psat4g016720 Pisum sativum
PSO210G4222 Papaver somniferum
PSO386G0176 Papaver somniferum
QL11p000460 Quercus lobata
RcHm_v2.0_Chr2g0094521 Rosa chinensis
Rhsim03G0228900 Rhododendron simsii
Rhsim03G0229200 Rhododendron simsii
Sabra06G0112300 Salix brachista
Sabra06G0113700 Salix brachista
SalBow3G1655 Salvia bowleyana
SalBow6G1458 Salvia bowleyana
Sc08g0008840 Simmondsia chinensis
Sc08g0009330 Simmondsia chinensis
Sed0009954 Sechium edule
SGA_v2.0_scaffold97G29140 Striga asiatica
SMO141G0192 Selaginella moellendorffii
Solyc05g041170.3 Solanum lycopersicum
Solyc10g049510.3 Solanum lycopersicum
Solyc10g049550.3 Solanum lycopersicum
Solyc10g054950.3 Solanum lycopersicum
Solyc10g054980.3 Solanum lycopersicum
Solyc10g055010.3 Solanum lycopersicum
Solyc10g055020.3 Solanum lycopersicum
Solyc10g055030.1 Solanum lycopersicum
Solyc10g055040.3 Solanum lycopersicum
Solyc10g055070.1 Solanum lycopersicum
Solyc10g055100.1 Solanum lycopersicum
Solyc10g055130.2 Solanum lycopersicum
Solyc10g055150.1 Solanum lycopersicum
Solyc10g055160.3 Solanum lycopersicum
Solyc12g009090.3 Solanum lycopersicum
Solyc12g062270.1 Solanum lycopersicum
Sopen10g024890 Solanum pennellii
Sopen10g024920 Solanum pennellii
Sopen10g024960 Solanum pennellii
Sopen12g004040 Solanum pennellii
Sopen12g011120 Solanum pennellii
Sp4g11040 Schrenkiella parvula
TAR383G0900 Trochodendron aralioides
TAR626G0523 Trochodendron aralioides
TAR626G1304 Trochodendron aralioides
THA.LOC104808891 Tarenaya hassleriana
THA.LOC104826585 Tarenaya hassleriana
Thecc.09G079100 Theobroma cacao
Thhalv10002659m.g Eutrema salsugineum
Thhalv10017586m.g Eutrema salsugineum
TPR.G9427 Trifolium pratense
TWI60G0494 Tripterygium wilfordii
unitig_749.g14240 Utricularia gibba
vmacro06328 Vaccinium macrocarpon
VMungo1215G3125 Vigna mungo
Zm00001eb314270 Zea mays

User provided reference genes

Program Settings