Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p14580 Brassica napus
A09p42510 Brassica napus
Aa31LG7G6210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4664 Anthoceros agrestis
Actinidia10324 Actinidia chinensis
Actinidia30773 Actinidia chinensis
Ah.12g059310 Amaranthus hybridus
AL1G35720 Arabidopsis lyrata
AL2G38520 Arabidopsis lyrata
Aqoxy6G00782 Aquilegia oxysepala
AT1G22270 Arabidopsis thaliana
AT1G78190 Arabidopsis thaliana
ATR0782G020 Amborella trichopoda
Atru.chr13.1186 Acer truncatum
Atru.chr5.2725 Acer truncatum
AUR62027759 Chenopodium quinoa
AUR62030717 Chenopodium quinoa
AUR62036356 Chenopodium quinoa
AUR62038524 Chenopodium quinoa
BcaB03g14221 Brassica carinata
BcaB03g15991 Brassica carinata
BcaB07g32248 Brassica carinata
BcaC05g26154 Brassica carinata
BcaC06g34947 Brassica carinata
BcaC08g47394 Brassica carinata
BolC5t30836H Brassica oleracea
BolC7t42673H Brassica oleracea
BraA07t29204Z Brassica rapa
BraA09t39727Z Brassica rapa
C05p21390 Brassica napus
C07p21470 Brassica napus
CAN.G101.27 Capsicum annuum
CANSAT35G1737 Cannabis sativa
CANSAT80G0901 Cannabis sativa
CANSAT80G2869 Cannabis sativa
CANSAT80G2909 Cannabis sativa
CARHR022650 Cardamine hirsuta
CARHR071660 Cardamine hirsuta
Carub.0001s2182 Capsella rubella
Carub.0002s2509 Capsella rubella
Ca_08121_v3 Cicer arietinum L.
Ca_20267_v3 Cicer arietinum L.
CBR_g44926 Chara braunii
Cc10_g07190 Coffea canephora
CDE02G1736 Ceratophyllum demersum
CDE06G0322 Ceratophyllum demersum
Cfa013636 Carpinus fangiana
Cfa016137 Carpinus fangiana
Ciclev10003351m.g Citrus clementina
CiPaw.07G180000 Carya illinoinensis
CiPaw.08G045200 Carya illinoinensis
ClCG08G011100 Citrullus lanatus
COL.COLO4_16398 Corchorus olitorius
Cpa.g.sc247.5 Carica papaya
Cpa.g.sc257.3 Carica papaya
Cpa.g.sc36.132 Carica papaya
Cpa.g.sc53.145 Carica papaya
Cre12.g512550 Chlamydomonas reinhardtii
CsaV3_2G029680 Cucumis sativus L.
CSS0017732 Camellia sinensis var. sinensis
DCAR_008736 Daucus carota
Dinv36547 Davidia involucrata
Duzib041G0085 Durio zibethinus
Duzib093G0332 Durio zibethinus
Duzib093G1861 Durio zibethinus
ECA238G4620 Erigeron canadensis
EL10Ac1g01214 Beta vulgaris
EL10Ac5g11858 Beta vulgaris
Eucgr.D01128 Eucalyptus grandis
FAN08G2022 Fragaria x ananassa
FAN13G1242 Fragaria x ananassa
FAN18G2812 Fragaria x ananassa
FvH4_5g37330 Fragaria vesca
Glyma.10G218300 Glycine max
Glyma.20G173300 Glycine max
Gohir.A05G267200 Gossypium hirsutum
Gohir.A06G035600 Gossypium hirsutum
Gohir.D05G268800 Gossypium hirsutum
Gohir.D06G036200 Gossypium hirsutum
Gorai.009G281400 Gossypium raimondii
Gorai.010G040200 Gossypium raimondii
GSVIVG01032524001 Vitis vinifera
HanXRQChr03g0069311 Helianthus annuus
HanXRQChr04g0126451 Helianthus annuus
HanXRQChr07g0194691 Helianthus annuus
Haze_00323 Corylus avellana
Haze_22268 Corylus avellana
Haze_27710 Corylus avellana
Hma1.2p1_0575F.1_g181580 Hydrangea macrophylla
Lalb_Chr08g0242051 Lupinus albus
Lalb_Chr11g0065431 Lupinus albus
Lj2g0026973 Lotus japonicus
Lsat_1_v5_gn_2_108521 Lactuca sativa
Lsat_1_v5_gn_4_16040 Lactuca sativa
Manes.08G094000 Manihot esculenta
Mapoly0008s0078 Marchantia polymorpha
MBI05_g37052_MAGBIO Magnolia biondii
MCO01G362 Micromonas commoda
MD08G1182900 Malus domestica
MD15G1369300 Malus domestica
Medtr1g050345 Medicago truncatula
Medtr2g028730 Medicago truncatula
MELO3C011026.2 Cucumis melo
Migut.C01173 Erythranthe guttata
MSTRG.25920 Avicennia marina
Nitab4.5_0000232g0200 Nicotiana tabacum
Nitab4.5_0005777g0070 Nicotiana tabacum
Nn1g03585 Nelumbo nucifera
Nn2g12152 Nelumbo nucifera
Nn4g22250 Nelumbo nucifera
Nn5g30107 Nelumbo nucifera
Nn6g33602 Nelumbo nucifera
Nn8g39569 Nelumbo nucifera
Oeu012929.1 Olea europaea
Oeu046302.1 Olea europaea
Os07g0623000 Oryza sativa ssp. japonica
Peaxi162Scf00041g00179 Petunia axillaris
PGR042G0728 Punica granatum
PGSC0003DMG400006413 Solanum tuberosum
Phvul.002G138800 Phaseolus vulgaris
Phvul.007G087400 Phaseolus vulgaris
Potri.002G096600 Populus trichocarpa
Potri.005G165000 Populus trichocarpa
Pp3c10_8220 Physcomitrium patens
PRCOL_00005343 Prasinoderma coloniale
Prupe.1G517100 Prunus persica
Psat1g170200 Pisum sativum
Psat2g179880 Pisum sativum
PSO541G5821 Papaver somniferum
PSO781G0205 Papaver somniferum
QL03p027611 Quercus lobata
QL12p036785 Quercus lobata
RcHm_v2.0_Chr7g0238971 Rosa chinensis
Rhsim06G0082000 Rhododendron simsii
Sabra02G0076100 Salix brachista
Sabra05G0124400 Salix brachista
SalBow7G2639 Salvia bowleyana
SalBow7G3516 Salvia bowleyana
Sc01g0000460 Simmondsia chinensis
Sed0012623 Sechium edule
SEGI_05614 Sequoiadendron giganteum
SEGI_26774 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10492 Striga asiatica
SHI20485 Sapria himalayana
SMO356G0508 Selaginella moellendorffii
Solyc04g074150.3 Solanum lycopersicum
Sopen04g029330 Solanum pennellii
Sp1g19780 Schrenkiella parvula
Sp5g33330 Schrenkiella parvula
TAR376G0181 Trochodendron aralioides
TAR628G0041 Trochodendron aralioides
THA.LOC104800150 Tarenaya hassleriana
THA.LOC104809715 Tarenaya hassleriana
Thecc.08G106700 Theobroma cacao
Thhalv10009116m.g Eutrema salsugineum
Thhalv10019322m.g Eutrema salsugineum
TPR.G10620 Trifolium pratense
TPR.G17517 Trifolium pratense
TWI12G1259 Tripterygium wilfordii
TWI36G1364 Tripterygium wilfordii
VMungo0720G0524 Vigna mungo
Zm00001eb109660 Zea mays

User provided reference genes

Program Settings