Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p23140 Brassica napus
A03p23150 Brassica napus
A04p31400 Brassica napus
A10p32000 Brassica napus
Aa31LG1G21190 Aethionema arabicum
Aa31LG3G780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1450 Anthoceros agrestis
Actinidia01816 Actinidia chinensis
Actinidia04783 Actinidia chinensis
Actinidia09260 Actinidia chinensis
Actinidia17946 Actinidia chinensis
Actinidia27706 Actinidia chinensis
Actinidia32305 Actinidia chinensis
Actinidia32307 Actinidia chinensis
Ah.04g150990 Amaranthus hybridus
Ah.13g076880 Amaranthus hybridus
AL4G39190 Arabidopsis lyrata
AL6G13760 Arabidopsis lyrata
Aqoxy2G00387 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1I7GZ6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NBNL1F Arachis hypogaea
AT2G41220 Arabidopsis thaliana
AT5G04140 Arabidopsis thaliana
ATR0745G061 Amborella trichopoda
Atru.chr1.1446 Acer truncatum
AUR62018342 Chenopodium quinoa
AUR62030325 Chenopodium quinoa
BcaB01g03483 Brassica carinata
BcaC01g05353 Brassica carinata
BcaC02g12842 Brassica carinata
BcaC02g12843 Brassica carinata
BcaC06g32116 Brassica carinata
BolC3t15130H Brassica oleracea
BolC4t28386H Brassica oleracea
BolC9t60011H Brassica oleracea
BraA03t11535Z Brassica rapa
BraA04t18598Z Brassica rapa
BraA10t45244Z Brassica rapa
C03p27570 Brassica napus
C04p68830 Brassica napus
C09p72720 Brassica napus
CAN.G396.17 Capsicum annuum
CAN.G85.1 Capsicum annuum
CAN.G85.3 Capsicum annuum
CANSAT64G0825 Cannabis sativa
CARHR136310 Cardamine hirsuta
CARHR209130 Cardamine hirsuta
Carub.0004s2353 Capsella rubella
Carub.0006s0309 Capsella rubella
Ca_08395_v3 Cicer arietinum L.
CBR_g38420 Chara braunii
Cc06_g19130 Coffea canephora
CDE09G0762 Ceratophyllum demersum
CDE09G0845 Ceratophyllum demersum
CDE09G0905 Ceratophyllum demersum
CDE09G1181 Ceratophyllum demersum
Cfa020008 Carpinus fangiana
Ciclev10004137m.g Citrus clementina
CiPaw.09G047200 Carya illinoinensis
CiPaw.10G039900 Carya illinoinensis
ClCG10G016190 Citrullus lanatus
COL.COLO4_36597 Corchorus olitorius
COL.COLO4_36598 Corchorus olitorius
Cpa.g.sc5.173 Carica papaya
Cre12.g514050 Chlamydomonas reinhardtii
CsaV3_3G040230 Cucumis sativus L.
CSS0039913 Camellia sinensis var. sinensis
CSS0044676 Camellia sinensis var. sinensis
DCAR_020564 Daucus carota
DCAR_020565 Daucus carota
Dinv09721 Davidia involucrata
Duzib093G1354 Durio zibethinus
Duzib128G0892 Durio zibethinus
ECA248G1696 Erigeron canadensis
EL10Ac3g07231 Beta vulgaris
Eucgr.A02249 Eucalyptus grandis
FAN02G2678 Fragaria x ananassa
FAN05G2108 Fragaria x ananassa
FAN09G1016 Fragaria x ananassa
FAN09G4168 Fragaria x ananassa
FAN13G2215 Fragaria x ananassa
FAN16G2131 Fragaria x ananassa
FAN16G3657 Fragaria x ananassa
FvH4_6g25460 Fragaria vesca
Glyma.03G128300 Glycine max
Glyma.19G130800 Glycine max
Gohir.A01G193200 Gossypium hirsutum
Gohir.D01G183500 Gossypium hirsutum
Gorai.002G226600 Gossypium raimondii
GSVIVG01033621001 Vitis vinifera
HanXRQChr03g0061571 Helianthus annuus
Haze_20222 Corylus avellana
HPP92_006726 Vanilla planifolia
HPP92_006727 Vanilla planifolia
Hund19100 Selenicereus undatus
Hund24590 Selenicereus undatus
Hund24592 Selenicereus undatus
Lalb_Chr22g0357391 Lupinus albus
Lj1A1093G56 Lonicera japonica
Lj1g0005026 Lotus japonicus
Lsat_1_v5_gn_5_158001 Lactuca sativa
Manes.09G005600 Manihot esculenta
Mapoly0023s0027 Marchantia polymorpha
MBI13_g34981_MAGBIO Magnolia biondii
MCO12G340 Micromonas commoda
MD14G1087500 Malus domestica
Medtr7g089970 Medicago truncatula
MELO3C009759.2 Cucumis melo
Migut.J01662 Erythranthe guttata
MSTRG.19811 Avicennia marina
Nitab4.5_0000415g0090 Nicotiana tabacum
Nitab4.5_0002936g0040 Nicotiana tabacum
Nn7g36729 Nelumbo nucifera
Oeu003178.1 Olea europaea
Oeu022964.1 Olea europaea
Oeu045857.1 Olea europaea
Oeu063779.1 Olea europaea
Os07g0658400 Oryza sativa ssp. japonica
Peaxi162Scf00076g00532 Petunia axillaris
PGR031G1148 Punica granatum
PGSC0003DMG400009698 Solanum tuberosum
Phvul.001G123900 Phaseolus vulgaris
Potri.006G038400 Populus trichocarpa
Potri.016G036900 Populus trichocarpa
Pp3c7_6520 Physcomitrium patens
Pp3c8_17940 Physcomitrium patens
Prupe.7G039100 Prunus persica
Psat3g078160 Pisum sativum
PSO339G5940 Papaver somniferum
PSO384G1328 Papaver somniferum
QL07p010117 Quercus lobata
RcHm_v2.0_Chr2g0125471 Rosa chinensis
Rhsim03G0040000 Rhododendron simsii
Sabra06G0025800 Salix brachista
Sabra16G0039100 Salix brachista
SalBow1G1285 Salvia bowleyana
SalBow6G4365 Salvia bowleyana
Sc13g0001150 Simmondsia chinensis
Sc13g0001170 Simmondsia chinensis
Sed0001320 Sechium edule
SEGI_16155 Sequoiadendron giganteum
SEGI_19961 Sequoiadendron giganteum
SEGI_31493 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30296 Striga asiatica
SMO232G0104 Selaginella moellendorffii
Solyc03g063560.3 Solanum lycopersicum
Sopen03g016230 Solanum pennellii
Sp4g23520 Schrenkiella parvula
Sp6g38610 Schrenkiella parvula
TAR636G2034 Trochodendron aralioides
THA.LOC104816414 Tarenaya hassleriana
Thecc.05G135300 Theobroma cacao
Thhalv10012425m.g Eutrema salsugineum
Thhalv10016134m.g Eutrema salsugineum
TPR.G22106 Trifolium pratense
TPR.G30627 Trifolium pratense
TWI74G1565 Tripterygium wilfordii
TWI77G0540 Tripterygium wilfordii
unitig_37.g12790 Utricularia gibba
vmacro07800 Vaccinium macrocarpon
VMungo1383G1431 Vigna mungo
VMungo1383G1842 Vigna mungo
Zm00001eb329710 Zea mays

User provided reference genes

Program Settings