Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01830 Brassica napus
A03p64850 Brassica napus
Aa31LG6G14010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.102 Anthoceros agrestis
Actinidia12050 Actinidia chinensis
Actinidia16480 Actinidia chinensis
Actinidia36489 Actinidia chinensis
AL7G13730 Arabidopsis lyrata
Aqoxy6G01305 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E12FQJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H8SGQ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4NG9B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KQW02R Arachis hypogaea
AT4G36960 Arabidopsis thaliana
ATR0104G012 Amborella trichopoda
ATR1089G137 Amborella trichopoda
Atru.chr3.322 Acer truncatum
AUR62001924 Chenopodium quinoa
AUR62003886 Chenopodium quinoa
BcaNung02522 Brassica carinata
BcaNung05425 Brassica carinata
BolC1t00190H Brassica oleracea
BolC1t00191H Brassica oleracea
BolC7t46637H Brassica oleracea
BraA01t00172Z Brassica rapa
BraA03t15548Z Brassica rapa
C01p01960 Brassica napus
C01p01970 Brassica napus
C07p62210 Brassica napus
CANSAT01G2142 Cannabis sativa
CARHR245540 Cardamine hirsuta
Carub.0007s0315 Capsella rubella
Ca_22160_v3 Cicer arietinum L.
Ca_24766_v3 Cicer arietinum L.
CBR_g41687 Chara braunii
CBR_g55034 Chara braunii
Cc07_g06030 Coffea canephora
CDE04G1611 Ceratophyllum demersum
CDE06G2167 Ceratophyllum demersum
CDE08G1600 Ceratophyllum demersum
Ciclev10025943m.g Citrus clementina
CiPaw.01G017700 Carya illinoinensis
ClCG02G012740 Citrullus lanatus
COL.COLO4_11423 Corchorus olitorius
Cpa.g.sc55.144 Carica papaya
Cre16.g662702 Chlamydomonas reinhardtii
CsaV3_2G016830 Cucumis sativus L.
CSS0036925 Camellia sinensis var. sinensis
CSS0045855 Camellia sinensis var. sinensis
DCAR_010891 Daucus carota
DCAR_025736 Daucus carota
Dinv22130 Davidia involucrata
Dinv29988 Davidia involucrata
Dinv39842 Davidia involucrata
Duzib187G1459 Durio zibethinus
Duzib264G0729 Durio zibethinus
ECA246G0492 Erigeron canadensis
EL10Ac6g15740 Beta vulgaris
Eucgr.H01665 Eucalyptus grandis
Eucgr.I00920 Eucalyptus grandis
Eucgr.L03635 Eucalyptus grandis
FAN19G1087 Fragaria x ananassa
FAN23G1456 Fragaria x ananassa
FAN26G0644 Fragaria x ananassa
FAN28G2221 Fragaria x ananassa
FvH4_1g16100 Fragaria vesca
Glyma.01G186400 Glycine max
Glyma.11G055500 Glycine max
Gohir.A11G192700 Gossypium hirsutum
Gohir.A12G071600 Gossypium hirsutum
Gohir.D11G199400 Gossypium hirsutum
Gohir.D12G069700 Gossypium hirsutum
Gorai.007G213600 Gossypium raimondii
Gorai.008G076700 Gossypium raimondii
GSVIVG01022126001 Vitis vinifera
HanXRQChr05g0129971 Helianthus annuus
HanXRQChr12g0378861 Helianthus annuus
HanXRQChr13g0394331 Helianthus annuus
HanXRQChr16g0502711 Helianthus annuus
HanXRQChr16g0504681 Helianthus annuus
Haze_15393 Corylus avellana
Hma1.2p1_0017F.1_g011430 Hydrangea macrophylla
HPP92_019277 Vanilla planifolia
HPP92_028289 Vanilla planifolia
Hund13549 Selenicereus undatus
Hund16317 Selenicereus undatus
Lalb_Chr00c02g0404081 Lupinus albus
Lalb_Chr05g0226561 Lupinus albus
Lalb_Chr05g0226571 Lupinus albus
Lj2g0002373 Lotus japonicus
Lj4C150T3 Lonicera japonica
Lj4g0013369 Lotus japonicus
Lj7A70T82 Lonicera japonica
Lsat_1_v5_gn_3_90660 Lactuca sativa
Manes.12G099600 Manihot esculenta
Manes.13G123900 Manihot esculenta
Mapoly0059s0021 Marchantia polymorpha
Mapoly0158s0019 Marchantia polymorpha
MBI03_g13480_MAGBIO Magnolia biondii
MBI03_g13481_MAGBIO Magnolia biondii
MBI03_g20876_MAGBIO Magnolia biondii
MD02G1172600 Malus domestica
MD15G1284600 Malus domestica
Medtr5g017280 Medicago truncatula
MELO3C020894.2 Cucumis melo
Migut.H00429 Erythranthe guttata
MSTRG.23743 Avicennia marina
Nitab4.5_0003298g0020 Nicotiana tabacum
Nitab4.5_0008512g0020 Nicotiana tabacum
Nn1g04835 Nelumbo nucifera
Nn5g27350 Nelumbo nucifera
Oeu014840.1 Olea europaea
Oeu031958.1 Olea europaea
Os01g0945800 Oryza sativa ssp. japonica
Os05g0376000 Oryza sativa ssp. japonica
Peaxi162Scf00450g00320 Petunia axillaris
PGR102G1302 Punica granatum
PGSC0003DMG401004019 Solanum tuberosum
Phvul.002G018500 Phaseolus vulgaris
Potri.005G138600 Populus trichocarpa
Potri.007G044400 Populus trichocarpa
Pp3c13_13860 Physcomitrium patens
Pp3c3_17370 Physcomitrium patens
Prupe.7G132900 Prunus persica
Psat2g167480 Pisum sativum
Psat4g086680 Pisum sativum
PSO541G5519 Papaver somniferum
PSO675G1732 Papaver somniferum
QL06p041296 Quercus lobata
QL09p051931 Quercus lobata
QL09p051989 Quercus lobata
QL09p052051 Quercus lobata
QL11p046249 Quercus lobata
RcHm_v2.0_Chr2g0105721 Rosa chinensis
RcHm_v2.0_Chr2g0133441 Rosa chinensis
RcHm_v2.0_Chr2g0141161 Rosa chinensis
RcHm_v2.0_Chr5g0044281 Rosa chinensis
RcHm_v2.0_Chr7g0214441 Rosa chinensis
Rhsim08G0100200 Rhododendron simsii
Sabra07G0039300 Salix brachista
Sc03g0001610 Simmondsia chinensis
Sc07g0000770 Simmondsia chinensis
Sed0017310 Sechium edule
SEGI_18865 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07312 Striga asiatica
SMO367G0068 Selaginella moellendorffii
Solyc02g090910.3 Solanum lycopersicum
Sopen02g035560 Solanum pennellii
Sp7g34800 Schrenkiella parvula
TAR381G1123 Trochodendron aralioides
TAR625G0268 Trochodendron aralioides
THA.LOC104807586 Tarenaya hassleriana
Thecc.01G056700 Theobroma cacao
Thhalv10025462m.g Eutrema salsugineum
TPR.G19074 Trifolium pratense
TPR.G30698 Trifolium pratense
TWI09G1528 Tripterygium wilfordii
TWI73G0782 Tripterygium wilfordii
unitig_736.g22666 Utricularia gibba
vmacro05342 Vaccinium macrocarpon
vmacro17956 Vaccinium macrocarpon
VMungo1215G3228 Vigna mungo
Zm00001eb141420 Zea mays
Zm00001eb363160 Zea mays

User provided reference genes

Program Settings