Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p10980 Brassica napus
A07p33400 Brassica napus
Aa31LG2G3110 Aethionema arabicum
Aa31LG9G17360 Aethionema arabicum
Actinidia17225 Actinidia chinensis
Actinidia22790 Actinidia chinensis
Ah.10g038030 Amaranthus hybridus
Ah.16g101240 Amaranthus hybridus
AL2G24280 Arabidopsis lyrata
AL7G46670 Arabidopsis lyrata
Aqoxy3G00096 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7W3XT8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7EQFT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MDT9N6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PJZ2BQ Arachis hypogaea
AT1G66460 Arabidopsis thaliana
AT5G37790 Arabidopsis thaliana
ATR0564G096 Amborella trichopoda
Atru.chr1.1842 Acer truncatum
AUR62023182 Chenopodium quinoa
AUR62023228 Chenopodium quinoa
AUR62037842 Chenopodium quinoa
BcaB02g08027 Brassica carinata
BcaB03g15269 Brassica carinata
BcaB06g27140 Brassica carinata
BcaC02g09612 Brassica carinata
BcaC08g44350 Brassica carinata
BcaC08g46055 Brassica carinata
BolC4t26047H Brassica oleracea
BolC6t36981H Brassica oleracea
BolC6t39067H Brassica oleracea
BraA04t16763Z Brassica rapa
BraA07t30967Z Brassica rapa
C04p44730 Brassica napus
C06p17910 Brassica napus
C06p39800 Brassica napus
CAN.G1061.45 Capsicum annuum
CAN.G1067.6 Capsicum annuum
CARHR058430 Cardamine hirsuta
CARHR214970 Cardamine hirsuta
Carub.0002s1249 Capsella rubella
Carub.0007s3297 Capsella rubella
Ca_08160_v3 Cicer arietinum L.
Cc07_g08090 Coffea canephora
CDE05G1072 Ceratophyllum demersum
CDE05G2689 Ceratophyllum demersum
Cfa007831 Carpinus fangiana
Ciclev10011487m.g Citrus clementina
CiPaw.03G069600 Carya illinoinensis
ClCG03G008660 Citrullus lanatus
COL.COLO4_15734 Corchorus olitorius
Cpa.g.sc116.32 Carica papaya
CsaV3_5G024060 Cucumis sativus L.
CSS0025553 Camellia sinensis var. sinensis
CSS0028248 Camellia sinensis var. sinensis
DCAR_021456 Daucus carota
DCAR_025871 Daucus carota
Dinv19019 Davidia involucrata
Duzib133G0765 Durio zibethinus
Duzib211G0213 Durio zibethinus
ECA246G3284 Erigeron canadensis
EL10Ac2g04470 Beta vulgaris
Eucgr.F02834 Eucalyptus grandis
Eucgr.J01549 Eucalyptus grandis
FAN19G0223 Fragaria x ananassa
FAN23G0123 Fragaria x ananassa
FAN26G2327 Fragaria x ananassa
FAN28G2693 Fragaria x ananassa
FvH4_1g28910 Fragaria vesca
Glyma.02G246000 Glycine max
Glyma.11G217400 Glycine max
Glyma.14G216100 Glycine max
Glyma.18G039400 Glycine max
Glyma.U032305 Glycine max
Gohir.A12G056300 Gossypium hirsutum
Gohir.D12G055700 Gossypium hirsutum
Gorai.008G058700 Gossypium raimondii
GSVIVG01030840001 Vitis vinifera
HanXRQChr12g0375611 Helianthus annuus
HanXRQChr15g0475441 Helianthus annuus
Haze_14234 Corylus avellana
Hma1.2p1_0283F.1_g113470 Hydrangea macrophylla
Hma1.2p1_0832F.1_g225530 Hydrangea macrophylla
HPP92_011080 Vanilla planifolia
HPP92_011084 Vanilla planifolia
HPP92_016577 Vanilla planifolia
Hund13686 Selenicereus undatus
Hund16211 Selenicereus undatus
Lalb_Chr15g0084841 Lupinus albus
Lj2C434T10 Lonicera japonica
Lj4A177T26 Lonicera japonica
Lj6g0016753 Lotus japonicus
Lsat_1_v5_gn_3_81141 Lactuca sativa
Manes.01G116400 Manihot esculenta
Manes.02G075200 Manihot esculenta
MBI12_g44964_MAGBIO Magnolia biondii
MBI12_g45865_MAGBIO Magnolia biondii
MD09G1262600 Malus domestica
MD17G1257500 Malus domestica
Medtr3g067650 Medicago truncatula
MELO3C022852.2 Cucumis melo
Migut.H00274 Erythranthe guttata
Migut.L00462 Erythranthe guttata
MSTRG.23617 Avicennia marina
MSTRG.3516 Avicennia marina
Nitab4.5_0000036g0490 Nicotiana tabacum
Nitab4.5_0002664g0070 Nicotiana tabacum
Nitab4.5_0003855g0010 Nicotiana tabacum
Nitab4.5_0009638g0030 Nicotiana tabacum
Nn3g18249 Nelumbo nucifera
Nn4g24201 Nelumbo nucifera
Oeu000909.1 Olea europaea
Oeu030813.2 Olea europaea
Oeu047408.1 Olea europaea
Peaxi162Scf01482g00010 Petunia axillaris
Peaxi162Scf02113g00020 Petunia axillaris
PGR004G1278 Punica granatum
PGR042G0645 Punica granatum
PGSC0003DMG400010411 Solanum tuberosum
PGSC0003DMG400030607 Solanum tuberosum
Phvul.001G231200 Phaseolus vulgaris
Phvul.008G234600 Phaseolus vulgaris
Potri.004G089100 Populus trichocarpa
Potri.017G126500 Populus trichocarpa
Prupe.3G160300 Prunus persica
Psat5g122360 Pisum sativum
PSO017G6062 Papaver somniferum
PSO478G0921 Papaver somniferum
QL11p003873 Quercus lobata
RcHm_v2.0_Chr3g0493411 Rosa chinensis
Rhsim08G0086700 Rhododendron simsii
Sabra04G0059700 Salix brachista
Sabra15G0044100 Salix brachista
Sabra17G0106200 Salix brachista
SalBow3G2506 Salvia bowleyana
Sc11g0008670 Simmondsia chinensis
Sc13g0007810 Simmondsia chinensis
Sed0017144 Sechium edule
Sed0017177 Sechium edule
SEGI_00956 Sequoiadendron giganteum
SEGI_15821 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18155 Striga asiatica
Solyc02g063330.3 Solanum lycopersicum
Solyc02g091470.3 Solanum lycopersicum
Sopen02g014400 Solanum pennellii
Sopen02g036090 Solanum pennellii
Sp5g21520 Schrenkiella parvula
Sp7g04250 Schrenkiella parvula
TAR371G0812 Trochodendron aralioides
TAR629G1729 Trochodendron aralioides
THA.LOC104805606 Tarenaya hassleriana
THA.LOC104822378 Tarenaya hassleriana
THA.LOC104823844 Tarenaya hassleriana
Thecc.04G119200 Theobroma cacao
Thhalv10019672m.g Eutrema salsugineum
Thhalv10027710m.g Eutrema salsugineum
TPR.G16688 Trifolium pratense
TWI53G2128 Tripterygium wilfordii
TWI74G0299 Tripterygium wilfordii
unitig_748.g8491 Utricularia gibba
vmacro18047 Vaccinium macrocarpon
vmacro22372 Vaccinium macrocarpon
vmacro22898 Vaccinium macrocarpon
VMungo0647G1065 Vigna mungo
VMungo1383G2011 Vigna mungo

User provided reference genes

Program Settings