Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02920 Brassica napus
A10p29530 Brassica napus
Aa31LG11G7700 Aethionema arabicum
Actinidia09378 Actinidia chinensis
Actinidia20300 Actinidia chinensis
Ah.13g076020 Amaranthus hybridus
AL6G16960 Arabidopsis lyrata
Aqoxy1G00175 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5F9GBV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M165LK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R4ID1P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4QI9P Arachis hypogaea
AT5G06839 Arabidopsis thaliana
ATR0605G386 Amborella trichopoda
Atru.chr6.1988 Acer truncatum
AUR62012074 Chenopodium quinoa
AUR62024335 Chenopodium quinoa
BcaB01g06004 Brassica carinata
BcaB01g06019 Brassica carinata
BcaC06g32400 Brassica carinata
BcaC06g32537 Brassica carinata
BolC3t12878H Brassica oleracea
BolC9t59733H Brassica oleracea
BraA03t09655Z Brassica rapa
BraA10t44996Z Brassica rapa
C03p03370 Brassica napus
C09p69900 Brassica napus
CAN.G1161.19 Capsicum annuum
CAN.G128.31 Capsicum annuum
CANSAT64G2019 Cannabis sativa
CARHR206330 Cardamine hirsuta
Carub.0006s0573 Capsella rubella
Ca_08501_v3 Cicer arietinum L.
Ca_12102_v3 Cicer arietinum L.
Cc06_g16230 Coffea canephora
CDE07G0077 Ceratophyllum demersum
Cfa016892 Carpinus fangiana
Ciclev10031361m.g Citrus clementina
CiPaw.09G032700 Carya illinoinensis
CiPaw.10G028400 Carya illinoinensis
ClCG10G017360 Citrullus lanatus
COL.COLO4_36128 Corchorus olitorius
Cpa.g.sc85.93 Carica papaya
CsaV3_3G039040 Cucumis sativus L.
CSS0027990 Camellia sinensis var. sinensis
DCAR_013560 Daucus carota
DCAR_019835 Daucus carota
Dinv14269 Davidia involucrata
Duzib093G2119 Durio zibethinus
Duzib106G0645 Durio zibethinus
Duzib128G0782 Durio zibethinus
ECA236G0387 Erigeron canadensis
ECA247G3800 Erigeron canadensis
EL10Ac3g06956 Beta vulgaris
Eucgr.A02436 Eucalyptus grandis
Eucgr.K01822 Eucalyptus grandis
FAN02G2828 Fragaria x ananassa
FAN05G4625 Fragaria x ananassa
FAN09G1496 Fragaria x ananassa
FAN14G4438 Fragaria x ananassa
FvH4_6g22750 Fragaria vesca
Glyma.02G176800 Glycine max
Glyma.03G142400 Glycine max
Glyma.10G092100 Glycine max
Glyma.19G145300 Glycine max
Gohir.A01G194600 Gossypium hirsutum
Gohir.A09G126400 Gossypium hirsutum
Gohir.D01G184800 Gossypium hirsutum
Gohir.D09G123100 Gossypium hirsutum
Gorai.002G228200 Gossypium raimondii
Gorai.006G141000 Gossypium raimondii
GSVIVG01033531001 Vitis vinifera
HanXRQChr10g0298231 Helianthus annuus
Haze_19946 Corylus avellana
HPP92_003003 Vanilla planifolia
HPP92_003006 Vanilla planifolia
HPP92_023779 Vanilla planifolia
Hund19185 Selenicereus undatus
Hund24779 Selenicereus undatus
Lalb_Chr18g0047641 Lupinus albus
Lj1g0005974 Lotus japonicus
Lj5g0016375 Lotus japonicus
Lju124A32G74 Lonicera japonica
Lsat_1_v5_gn_9_27821 Lactuca sativa
Manes.08G046700 Manihot esculenta
Manes.09G031700 Manihot esculenta
MBI01_g15749_MAGBIO Magnolia biondii
MBI04_g14273_MAGBIO Magnolia biondii
MD12G1061900 Malus domestica
MD14G1062300 Malus domestica
Medtr0126s0080 Medicago truncatula
Medtr7g092750 Medicago truncatula
MELO3C009647.2 Cucumis melo
Migut.J01815 Erythranthe guttata
Migut.K00055 Erythranthe guttata
MSTRG.10834 Avicennia marina
MSTRG.26096 Avicennia marina
MSTRG.6462 Avicennia marina
Nitab4.5_0000016g0210 Nicotiana tabacum
Nitab4.5_0000991g0040 Nicotiana tabacum
Nitab4.5_0001538g0100 Nicotiana tabacum
Nitab4.5_0002681g0020 Nicotiana tabacum
Nitab4.5_0004063g0120 Nicotiana tabacum
Nitab4.5_0006853g0020 Nicotiana tabacum
Nn2g15572 Nelumbo nucifera
Nn7g36064 Nelumbo nucifera
Oeu033749.1 Olea europaea
Os02g0194900 Oryza sativa ssp. japonica
Os09g0489500 Oryza sativa ssp. japonica
Peaxi162Scf00003g00428 Petunia axillaris
Peaxi162Scf00258g00009 Petunia axillaris
Peaxi162Scf00406g00716 Petunia axillaris
PGR004G2402 Punica granatum
PGSC0003DMG400011430 Solanum tuberosum
PGSC0003DMG400023678 Solanum tuberosum
Phvul.001G140100 Phaseolus vulgaris
Phvul.007G257700 Phaseolus vulgaris
Potri.006G058800 Populus trichocarpa
Potri.016G049200 Populus trichocarpa
Prupe.7G073000 Prunus persica
Psat0s1113g0040 Pisum sativum
Psat6g121080 Pisum sativum
PSO339G0714 Papaver somniferum
PSO384G3130 Papaver somniferum
QL07p022812 Quercus lobata
RcHm_v2.0_Chr3g0480361 Rosa chinensis
Rhsim03G0009400 Rhododendron simsii
Rhsim03G0012700 Rhododendron simsii
Rhsim03G0013100 Rhododendron simsii
Sabra06G0042300 Salix brachista
Sabra16G0053100 Salix brachista
SalBow1G5711 Salvia bowleyana
SalBow1G5932 Salvia bowleyana
SalBow6G2017 Salvia bowleyana
Sc13g0002090 Simmondsia chinensis
Sc19g0006950 Simmondsia chinensis
Sc25g0005150 Simmondsia chinensis
Sed0013219 Sechium edule
Sed0016563 Sechium edule
SGA_v2.0_scaffold105G30473 Striga asiatica
SGA_v2.0_scaffold273G46449 Striga asiatica
SGA_v2.0_scaffold94G28442 Striga asiatica
SHI26297 Sapria himalayana
Solyc10g078670.3 Solanum lycopersicum
Solyc10g080410.3 Solanum lycopersicum
Sopen10g029290 Solanum pennellii
Sopen10g030950 Solanum pennellii
Sp6g36020 Schrenkiella parvula
TAR369G0758 Trochodendron aralioides
TAR623G0580 Trochodendron aralioides
TAR633G0874 Trochodendron aralioides
TAR636G2818 Trochodendron aralioides
THA.LOC104799311 Tarenaya hassleriana
Thecc.05G167800 Theobroma cacao
Thhalv10014032m.g Eutrema salsugineum
TPR.G23149 Trifolium pratense
TPR.G35765 Trifolium pratense
TWI53G1207 Tripterygium wilfordii
TWI74G0132 Tripterygium wilfordii
TWI77G0532 Tripterygium wilfordii
unitig_736.g22296 Utricularia gibba
unitig_749.g14142 Utricularia gibba
vmacro07938 Vaccinium macrocarpon
VMungo0720G3023 Vigna mungo
VMungo1383G0627 Vigna mungo
Zm00001eb101910 Zea mays
Zm00001eb236380 Zea mays
Zm00001eb316720 Zea mays

User provided reference genes

Program Settings