Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p04850 Brassica napus
A09p48090 Brassica napus
Aa31LG10G10070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2194 Anthoceros agrestis
Actinidia13845 Actinidia chinensis
Actinidia29196 Actinidia chinensis
Actinidia38228 Actinidia chinensis
Ah.10g033170 Amaranthus hybridus
Ah.16g108160 Amaranthus hybridus
AL5G36190 Arabidopsis lyrata
Aqoxy4G03100 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5B7TYX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3B011 Arachis hypogaea
AT3G55070 Arabidopsis thaliana
ATR0810G097 Amborella trichopoda
Atru.BG.269.p Acer truncatum
AUR62025543 Chenopodium quinoa
AUR62043534 Chenopodium quinoa
AUR62043801 Chenopodium quinoa
BcaB01g00131 Brassica carinata
BcaB02g07699 Brassica carinata
BcaB04g19121 Brassica carinata
BcaB05g23770 Brassica carinata
BcaC02g09720 Brassica carinata
BcaC07g39830 Brassica carinata
BcaC08g44723 Brassica carinata
BolC4t25299H Brassica oleracea
BolC6t37451H Brassica oleracea
BolC8t50654H Brassica oleracea
BraA04t16198Z Brassica rapa
BraA09t40263Z Brassica rapa
C04p37350 Brassica napus
C06p22600 Brassica napus
C06p22610 Brassica napus
C08p30300 Brassica napus
C08p30310 Brassica napus
CAN.G786.34 Capsicum annuum
CAN.G786.36 Capsicum annuum
CANSAT56G1270 Cannabis sativa
CARHR165090 Cardamine hirsuta
Carub.0005s2170 Capsella rubella
Ca_11339_v3 Cicer arietinum L.
CBR_g863 Chara braunii
Cc02_g08700 Coffea canephora
CDE05G1554 Ceratophyllum demersum
CDE11G0382 Ceratophyllum demersum
Cfa001563 Carpinus fangiana
Cfa024562 Carpinus fangiana
Ciclev10031660m.g Citrus clementina
CiPaw.01G279200 Carya illinoinensis
CiPaw.02G178300 Carya illinoinensis
ClCG02G013690 Citrullus lanatus
COL.COLO4_05799 Corchorus olitorius
Cpa.g.sc1.298 Carica papaya
Cre03.g144867 Chlamydomonas reinhardtii
CsaV3_5G006500 Cucumis sativus L.
CSS0006131 Camellia sinensis var. sinensis
CSS0019692 Camellia sinensis var. sinensis
CSS0021401 Camellia sinensis var. sinensis
CSS0031096 Camellia sinensis var. sinensis
CSS0032920 Camellia sinensis var. sinensis
CSS0033958 Camellia sinensis var. sinensis
CSS0043771 Camellia sinensis var. sinensis
DCAR_019151 Daucus carota
DCAR_019154 Daucus carota
Dinv25941 Davidia involucrata
Dinv31387 Davidia involucrata
Duzib106G0238 Durio zibethinus
Duzib114G0902 Durio zibethinus
ECA232G1460 Erigeron canadensis
EL10Ac2g03514 Beta vulgaris
Eucgr.J01144 Eucalyptus grandis
FAN01G0258 Fragaria x ananassa
FAN01G0780 Fragaria x ananassa
FAN03G0565 Fragaria x ananassa
FAN06G3181 Fragaria x ananassa
FAN06G3682 Fragaria x ananassa
FAN10G1136 Fragaria x ananassa
FvH4_7g20680 Fragaria vesca
Glyma.10G292551 Glycine max
Glyma.20G242800 Glycine max
Gohir.A05G343200 Gossypium hirsutum
Gohir.A10G208700 Gossypium hirsutum
Gohir.D04G081100 Gossypium hirsutum
Gohir.D10G217000 Gossypium hirsutum
Gorai.011G242600 Gossypium raimondii
Gorai.012G092000 Gossypium raimondii
GSVIVG01032634001 Vitis vinifera
HanXRQChr09g0246601 Helianthus annuus
HanXRQChr15g0496791 Helianthus annuus
Haze_16966 Corylus avellana
Haze_27231 Corylus avellana
Hma1.2p1_0207F.1_g087990 Hydrangea macrophylla
Hma1.2p1_0348F.1_g131730 Hydrangea macrophylla
HPP92_016703 Vanilla planifolia
Hund22437 Selenicereus undatus
Lalb_Chr02g0143841 Lupinus albus
Lalb_Chr21g0307121 Lupinus albus
Lj5g0010112 Lotus japonicus
Lj8A93G63 Lonicera japonica
Lsat_1_v5_gn_9_66761 Lactuca sativa
Manes.03G138849 Manihot esculenta
Manes.03G138852 Manihot esculenta
Manes.07G106200 Manihot esculenta
Manes.10G039500 Manihot esculenta
Mapoly0093s0006 Marchantia polymorpha
MBI02_g23397_MAGBIO Magnolia biondii
MBI05_g05301_MAGBIO Magnolia biondii
MBI08_g12332_MAGBIO Magnolia biondii
MBI15_g43999_MAGBIO Magnolia biondii
MD01G1115200 Malus domestica
MD01G1115600 Malus domestica
MD07G1183500 Malus domestica
Medtr1g116055 Medicago truncatula
MELO3C011710.2 Cucumis melo
MELO3C021063.2 Cucumis melo
Migut.F01536 Erythranthe guttata
MSTRG.8232 Avicennia marina
Nitab4.5_0006737g0080 Nicotiana tabacum
Nitab4.5_0007221g0020 Nicotiana tabacum
Nn2g10558 Nelumbo nucifera
Nn2g12826 Nelumbo nucifera
Oeu050636.1 Olea europaea
Os05g0160100 Oryza sativa ssp. japonica
Peaxi162Scf00135g00213 Petunia axillaris
PGR044G2742 Punica granatum
Phvul.007G007400 Phaseolus vulgaris
Potri.008G047300 Populus trichocarpa
Potri.010G213950 Populus trichocarpa
Pp3c24_18980 Physcomitrium patens
Pp3c8_20500 Physcomitrium patens
PRCOL_00005225 Prasinoderma coloniale
Prupe.2G222200 Prunus persica
Psat6g239360 Pisum sativum
PSO384G1824 Papaver somniferum
PSO699G0010 Papaver somniferum
QL08p057473 Quercus lobata
RcHm_v2.0_Chr1g0364711 Rosa chinensis
RcHm_v2.0_Chr1g0364751 Rosa chinensis
RcHm_v2.0_Chr5g0057291 Rosa chinensis
Rhsim09G0155700 Rhododendron simsii
Sabra08G0033500 Salix brachista
Sabra10G0165600 Salix brachista
SalBow6G5798 Salvia bowleyana
Sc20g0002340 Simmondsia chinensis
Sed0007781 Sechium edule
Sed0024713 Sechium edule
SEGI_26055 Sequoiadendron giganteum
SGA_v2.0_scaffold426G51499 Striga asiatica
SHI04699 Sapria himalayana
SHI28206 Sapria himalayana
SHI28208 Sapria himalayana
SMO111G0010 Selaginella moellendorffii
SMO119G0426 Selaginella moellendorffii
Solyc04g010120.3 Solanum lycopersicum
Sopen04g005260 Solanum pennellii
Sp5g07350 Schrenkiella parvula
TAR623G1321 Trochodendron aralioides
TAR633G2156 Trochodendron aralioides
THA.LOC104809995 Tarenaya hassleriana
THA.LOC104810168 Tarenaya hassleriana
Thecc.10G063500 Theobroma cacao
Thhalv10010415m.g Eutrema salsugineum
TPR.G10404 Trifolium pratense
TPR.G40391 Trifolium pratense
TWI63G0514 Tripterygium wilfordii
unitig_0.g2403 Utricularia gibba
VMungo0720G1844 Vigna mungo
Zm00001eb282460 Zea mays

User provided reference genes

Program Settings