Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p25550 Brassica napus
A09p53600 Brassica napus
Aa31LG10G15450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1042 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2358 Anthoceros agrestis
Actinidia10075 Actinidia chinensis
Actinidia20163 Actinidia chinensis
Ah.05g180160 Amaranthus hybridus
AL4G45340 Arabidopsis lyrata
AL5G43890 Arabidopsis lyrata
Aqoxy5G04084 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.63JPLQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8BBS1S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8G3C0P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9CR96V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CIF5FW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DMYH1R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GKUV9U Arachis hypogaea
AT2G46110 Arabidopsis thaliana
AT3G61530 Arabidopsis thaliana
ATR0751G082 Amborella trichopoda
ATR0751G137 Amborella trichopoda
ATR0751G274 Amborella trichopoda
Atru.chr7.1494 Acer truncatum
AUR62004413 Chenopodium quinoa
AUR62022619 Chenopodium quinoa
BcaB02g07374 Brassica carinata
BcaC07g40651 Brassica carinata
BcaC07g40671 Brassica carinata
BcaC07g42671 Brassica carinata
BcaC08g45130 Brassica carinata
BolC6t37921H Brassica oleracea
BolC8t51222H Brassica oleracea
BraA07t30196Z Brassica rapa
BraA09t40782Z Brassica rapa
C06p27540 Brassica napus
C08p36390 Brassica napus
CAN.G439.28 Capsicum annuum
CAN.G439.29 Capsicum annuum
CANSAT56G4107 Cannabis sativa
CARHR107270 Cardamine hirsuta
Carub.0004s2881 Capsella rubella
Carub.0005s2822 Capsella rubella
Ca_03489_v3 Cicer arietinum L.
Ca_03490_v3 Cicer arietinum L.
CBR_g45417 Chara braunii
Cc02_g21240 Coffea canephora
CDE11G0110 Ceratophyllum demersum
Cfa001640 Carpinus fangiana
Cfa003872 Carpinus fangiana
Ciclev10020577m.g Citrus clementina
CiPaw.02G034800 Carya illinoinensis
ClCG09G009090 Citrullus lanatus
COL.COLO4_12778 Corchorus olitorius
Cpa.g.sc11.73 Carica papaya
Cre12.g508550 Chlamydomonas reinhardtii
CsaV3_7G025860 Cucumis sativus L.
CSS0027402 Camellia sinensis var. sinensis
CSS0029554 Camellia sinensis var. sinensis
DCAR_025214 Daucus carota
Dinv32522 Davidia involucrata
Duzib138G1147 Durio zibethinus
Duzib268G0835 Durio zibethinus
ECA234G0147 Erigeron canadensis
EL10Ac1g00354 Beta vulgaris
Eucgr.B01984 Eucalyptus grandis
Eucgr.B01986 Eucalyptus grandis
Eucgr.B01988 Eucalyptus grandis
FAN01G2460 Fragaria x ananassa
FAN03G0096 Fragaria x ananassa
FAN06G0189 Fragaria x ananassa
FAN06G1753 Fragaria x ananassa
FAN06G1997 Fragaria x ananassa
FAN06G4041 Fragaria x ananassa
FAN10G1509 Fragaria x ananassa
FAN10G1698 Fragaria x ananassa
FAN10G3606 Fragaria x ananassa
FAN10G3616 Fragaria x ananassa
FvH4_7g15370 Fragaria vesca
FvH4_7g15371 Fragaria vesca
Glyma.07G064600 Glycine max
Glyma.09G254700 Glycine max
Gohir.A08G032200 Gossypium hirsutum
Gohir.A08G133000 Gossypium hirsutum
Gohir.D08G043100 Gossypium hirsutum
Gohir.D08G154300 Gossypium hirsutum
Gorai.004G041700 Gossypium raimondii
Gorai.004G160400 Gossypium raimondii
GSVIVG01026967001 Vitis vinifera
HanXRQChr15g0474641 Helianthus annuus
HanXRQChr17g0562171 Helianthus annuus
Haze_15565 Corylus avellana
Haze_27487 Corylus avellana
Hma1.2p1_0335F.1_g128890 Hydrangea macrophylla
HPP92_005267 Vanilla planifolia
Hund27241 Selenicereus undatus
Lalb_Chr17g0338041 Lupinus albus
Lj1g0027864 Lotus japonicus
Lj5g0009706 Lotus japonicus
Lj6g0001313 Lotus japonicus
Lj9C589T5 Lonicera japonica
Lsat_1_v5_gn_4_35260 Lactuca sativa
Manes.05G029300 Manihot esculenta
Mapoly0035s0043 Marchantia polymorpha
MBI03_g34597_MAGBIO Magnolia biondii
MBI12_g43904_MAGBIO Magnolia biondii
MBI17_g16531_MAGBIO Magnolia biondii
MCO13G154 Micromonas commoda
MD07G1131200 Malus domestica
Medtr4g037245 Medicago truncatula
Medtr4g037275 Medicago truncatula
Medtr4g037305 Medicago truncatula
Medtr4g037315 Medicago truncatula
Medtr8g028555 Medicago truncatula
MELO3C012767.2 Cucumis melo
MELO3C014805.2 Cucumis melo
Migut.B01799 Erythranthe guttata
Nitab4.5_0000615g0020 Nicotiana tabacum
Nitab4.5_0005222g0030 Nicotiana tabacum
Nn1g01686 Nelumbo nucifera
Nn6g32447 Nelumbo nucifera
Oeu054354.2 Olea europaea
Os01g0225400 Oryza sativa ssp. japonica
Os01g0225500 Oryza sativa ssp. japonica
Peaxi162Scf00217g00711 Petunia axillaris
PGR004G0897 Punica granatum
PGSC0003DMG400002011 Solanum tuberosum
PGSC0003DMG400018716 Solanum tuberosum
Phvul.010G104900 Phaseolus vulgaris
Potri.002G164601 Populus trichocarpa
Potri.014G090500 Populus trichocarpa
Pp3c7_220 Physcomitrium patens
PRCOL_00005166 Prasinoderma coloniale
Prupe.2G177600 Prunus persica
Psat4g156920 Pisum sativum
PSO063G1481 Papaver somniferum
PSO170G0644 Papaver somniferum
QL04p055532 Quercus lobata
RcHm_v2.0_Chr1g0357691 Rosa chinensis
RcHm_v2.0_Chr1g0357711 Rosa chinensis
Rhsim07G0010400 Rhododendron simsii
Rhsim07G0205800 Rhododendron simsii
Rhsim07G0206900 Rhododendron simsii
Sabra14G0065600 Salix brachista
Sc01g0003210 Simmondsia chinensis
SEGI_12250 Sequoiadendron giganteum
SEGI_21771 Sequoiadendron giganteum
SEGI_25526 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02279 Striga asiatica
SHI16536 Sapria himalayana
SMO119G0299 Selaginella moellendorffii
SMO144G0210 Selaginella moellendorffii
SMO356G0035 Selaginella moellendorffii
Solyc09g007130.3 Solanum lycopersicum
Sopen09g002000 Solanum pennellii
Sp4g28180 Schrenkiella parvula
Sp5g01880 Schrenkiella parvula
TAR375G1056 Trochodendron aralioides
THA.LOC104817317 Tarenaya hassleriana
Thecc.01G352400 Theobroma cacao
Thhalv10001521m.g Eutrema salsugineum
TPR.G28287 Trifolium pratense
TPR.G28294 Trifolium pratense
TPR.G37181 Trifolium pratense
TWI23G0617 Tripterygium wilfordii
unitig_60.g25627 Utricularia gibba
vmacro13227 Vaccinium macrocarpon
VMungo0331G0386 Vigna mungo
Zm00001eb339000 Zea mays

User provided reference genes

Program Settings