Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p18560 Brassica napus
A05p34250 Brassica napus
Aa31LG10G1970 Aethionema arabicum
Aa31LG8G2420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4386 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3445 Anthoceros agrestis
Actinidia09698 Actinidia chinensis
Actinidia09699 Actinidia chinensis
Actinidia12795 Actinidia chinensis
Actinidia12798 Actinidia chinensis
Ah.06g184510 Amaranthus hybridus
AL1G61540 Arabidopsis lyrata
AL3G27620 Arabidopsis lyrata
Aqoxy1G02338 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IF9FMX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q9DAYR Arachis hypogaea
AT1G53165 Arabidopsis thaliana
AT3G15220 Arabidopsis thaliana
ATR0150G013 Amborella trichopoda
Atru.chr2.2425 Acer truncatum
AUR62019457 Chenopodium quinoa
AUR62036173 Chenopodium quinoa
BcaB02g10934 Brassica carinata
BcaB06g29546 Brassica carinata
BcaC01g01362 Brassica carinata
BcaC08g44049 Brassica carinata
BolC3t21432H Brassica oleracea
BolC5t33886H Brassica oleracea
BolC6t36630H Brassica oleracea
BraA05t20749Z Brassica rapa
BraA05t22245Z Brassica rapa
C03p91200 Brassica napus
C05p52010 Brassica napus
C06p14490 Brassica napus
CAN.G162.39 Capsicum annuum
CANSAT56G2918 Cannabis sativa
CARHR043390 Cardamine hirsuta
CARHR090210 Cardamine hirsuta
Carub.0001s4233 Capsella rubella
Carub.0003s1488 Capsella rubella
Ca_03525_v3 Cicer arietinum L.
CBR_g37697 Chara braunii
Cc05_g11800 Coffea canephora
Cc05_g11810 Coffea canephora
CDE02G0939 Ceratophyllum demersum
CDE02G3458 Ceratophyllum demersum
CDE05G2963 Ceratophyllum demersum
Cfa027192 Carpinus fangiana
Ciclev10007625m.g Citrus clementina
CiPaw.11G171700 Carya illinoinensis
CiPaw.12G120000 Carya illinoinensis
ClCG11G017900 Citrullus lanatus
COL.COLO4_36710 Corchorus olitorius
Cpa.g.sc622.3 Carica papaya
Cre12.g544400 Chlamydomonas reinhardtii
CsaV3_4G033530 Cucumis sativus L.
CSS0014493 Camellia sinensis var. sinensis
CSS0021889 Camellia sinensis var. sinensis
CSS0025002 Camellia sinensis var. sinensis
DCAR_019567 Daucus carota
DCAR_020994 Daucus carota
Dinv14934 Davidia involucrata
Dinv20197 Davidia involucrata
Duzib170G0212 Durio zibethinus
Duzib213G0712 Durio zibethinus
Duzib244G0005 Durio zibethinus
Duzib268G0440 Durio zibethinus
ECA234G3073 Erigeron canadensis
ECA236G3680 Erigeron canadensis
EL10Ac4g08224 Beta vulgaris
Eucgr.F01158 Eucalyptus grandis
FAN11G2605 Fragaria x ananassa
FAN16G2185 Fragaria x ananassa
FAN21G0672 Fragaria x ananassa
FAN25G3598 Fragaria x ananassa
FvH4_3g19600 Fragaria vesca
Glyma.06G238000 Glycine max
Glyma.12G162963 Glycine max
Glyma.12G226300 Glycine max
Glyma.13G274500 Glycine max
Gohir.A01G061500 Gossypium hirsutum
Gohir.A04G035100 Gossypium hirsutum
Gohir.A13G146700 Gossypium hirsutum
Gohir.D01G048100 Gossypium hirsutum
Gohir.D05G348300 Gossypium hirsutum
Gorai.002G067900 Gossypium raimondii
Gorai.009G376100 Gossypium raimondii
GSVIVG01014297001 Vitis vinifera
HanXRQChr10g0302641 Helianthus annuus
HanXRQChr15g0495451 Helianthus annuus
Haze_09451 Corylus avellana
Haze_26102 Corylus avellana
Haze_26474 Corylus avellana
Hma1.2p1_2118F.1_g314350 Hydrangea macrophylla
HPP92_010204 Vanilla planifolia
Hund22872 Selenicereus undatus
Lalb_Chr01g0016761 Lupinus albus
Lalb_Chr20g0109541 Lupinus albus
Lalb_Chr25g0286251 Lupinus albus
Lj1A840T52 Lonicera japonica
Lj3g0001084 Lotus japonicus
Lj3g0007512 Lotus japonicus
Lj8C154G21 Lonicera japonica
Lsat_1_v5_gn_5_128461 Lactuca sativa
Lsat_1_v5_gn_7_104681 Lactuca sativa
Manes.03G106600 Manihot esculenta
Manes.15G089100 Manihot esculenta
Mapoly0133s0001 Marchantia polymorpha
MBI02_g22346_MAGBIO Magnolia biondii
MCO05G399 Micromonas commoda
MD03G1231300 Malus domestica
MD11G1252300 Malus domestica
Medtr2g078740 Medicago truncatula
MELO3C025602.2 Cucumis melo
Migut.H01953 Erythranthe guttata
Nitab4.5_0002330g0040 Nicotiana tabacum
Nitab4.5_0005017g0020 Nicotiana tabacum
Nn1g04174 Nelumbo nucifera
Nn1g06451 Nelumbo nucifera
Nn8g40510 Nelumbo nucifera
Oeu037369.1 Olea europaea
Oeu051082.2 Olea europaea
Os07g0507300 Oryza sativa ssp. japonica
Peaxi162Scf00069g01722 Petunia axillaris
PGR083G0851 Punica granatum
Phvul.005G074300 Phaseolus vulgaris
Phvul.011G164700 Phaseolus vulgaris
Potri.001G397600 Populus trichocarpa
Potri.011G116300 Populus trichocarpa
Pp3c17_14200 Physcomitrium patens
Pp3c1_23810 Physcomitrium patens
Pp3c2_10350 Physcomitrium patens
Prupe.4G176700 Prunus persica
Psat5g241840 Pisum sativum
PSO541G3462 Papaver somniferum
PSO675G8241 Papaver somniferum
QL08p022680 Quercus lobata
RcHm_v2.0_Chr5g0032781 Rosa chinensis
Rhsim06G0201500 Rhododendron simsii
Sabra11G0101900 Salix brachista
Sabra16G0260600 Salix brachista
SalBow7G2789 Salvia bowleyana
Sc03g0010150 Simmondsia chinensis
Sed0017869 Sechium edule
Sed0018585 Sechium edule
SEGI_19237 Sequoiadendron giganteum
SEGI_33899 Sequoiadendron giganteum
SEGI_39523 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13801 Striga asiatica
SGA_v2.0_scaffold73G24238 Striga asiatica
SHI32859 Sapria himalayana
SHI33363 Sapria himalayana
SMO351G0517 Selaginella moellendorffii
Solyc07g062940.4 Solanum lycopersicum
Sopen07g031130 Solanum pennellii
Sp1g39720 Schrenkiella parvula
Sp3g13430 Schrenkiella parvula
TAR627G0899 Trochodendron aralioides
TAR629G0109 Trochodendron aralioides
THA.LOC104810460 Tarenaya hassleriana
THA.LOC104818087 Tarenaya hassleriana
Thecc.07G095400 Theobroma cacao
Thhalv10011332m.g Eutrema salsugineum
Thhalv10022019m.g Eutrema salsugineum
TPR.G7967 Trifolium pratense
TWI38G0342 Tripterygium wilfordii
TWI39G1101 Tripterygium wilfordii
unitig_46.g18322 Utricularia gibba
vmacro11884 Vaccinium macrocarpon
VMungo1080G1214 Vigna mungo
Zm00001eb322360 Zea mays

User provided reference genes

Program Settings