Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19100 Brassica napus
A05p11320 Brassica napus
Aa31LG9G14080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3958 Anthoceros agrestis
Ah.09g229240 Amaranthus hybridus
AL4G30320 Arabidopsis lyrata
Aqoxy7G03292 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4S1ZVA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.704H70 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S2P6Y8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WW7XLJ Arachis hypogaea
AT2G34357 Arabidopsis thaliana
ATR0681G226 Amborella trichopoda
ATR0681G387 Amborella trichopoda
ATR0709G027 Amborella trichopoda
Atru.chr7.1751 Acer truncatum
Atru.chr7.1752 Acer truncatum
AUR62019633 Chenopodium quinoa
AUR62025277 Chenopodium quinoa
AUR62028280 Chenopodium quinoa
AUR62028281 Chenopodium quinoa
AUR62039592 Chenopodium quinoa
BcaB01g03896 Brassica carinata
BcaB02g09558 Brassica carinata
BcaC01g05798 Brassica carinata
BcaC02g11500 Brassica carinata
BcaC02g11606 Brassica carinata
BolC3t14614H Brassica oleracea
BolC4t23047H Brassica oleracea
BraA03t11167Z Brassica rapa
BraA05t20081Z Brassica rapa
C03p22320 Brassica napus
C04p13350 Brassica napus
C04p14660 Brassica napus
CAN.G333.13 Capsicum annuum
CAN.G333.14 Capsicum annuum
CAN.G333.15 Capsicum annuum
CAN.G63.12 Capsicum annuum
CANSAT56G3462 Cannabis sativa
CARHR128440 Cardamine hirsuta
Carub.0004s1602 Capsella rubella
Ca_09790_v3 Cicer arietinum L.
CBR_g11184 Chara braunii
CBR_g11186 Chara braunii
Cc06_g12580 Coffea canephora
CDE04G0230 Ceratophyllum demersum
CDE12G0121 Ceratophyllum demersum
CDE12G0161 Ceratophyllum demersum
CDE12G0742 Ceratophyllum demersum
Cfa002954 Carpinus fangiana
Cfa025324 Carpinus fangiana
Ciclev10023308m.g Citrus clementina
CiPaw.03G202600 Carya illinoinensis
ClCG03G014800 Citrullus lanatus
COL.COLO4_21223 Corchorus olitorius
Cpa.g.sc32.6 Carica papaya
Cre19.g751197 Chlamydomonas reinhardtii
CsaV3_1G041350 Cucumis sativus L.
CSS0017458 Camellia sinensis var. sinensis
DCAR_003861 Daucus carota
DCAR_005064 Daucus carota
Dinv25520 Davidia involucrata
Dinv25554 Davidia involucrata
Dinv30816 Davidia involucrata
Duzib168G0208 Durio zibethinus
ECA240G3214 Erigeron canadensis
EL10Ac8g19018 Beta vulgaris
Eucgr.C00777 Eucalyptus grandis
FAN04G1381 Fragaria x ananassa
FAN08G1830 Fragaria x ananassa
FAN19G0770 Fragaria x ananassa
FAN19G0975 Fragaria x ananassa
FAN23G1590 Fragaria x ananassa
FAN26G0091 Fragaria x ananassa
FAN26G0455 Fragaria x ananassa
FAN26G1120 Fragaria x ananassa
FAN28G0236 Fragaria x ananassa
FAN28G1182 Fragaria x ananassa
FvH4_1g09210 Fragaria vesca
FvH4_1g13570 Fragaria vesca
FvH4_1g13610 Fragaria vesca
Glyma.13G112900 Glycine max
Glyma.17G046900 Glycine max
Gohir.A07G016500 Gossypium hirsutum
Gohir.D07G016300 Gossypium hirsutum
Gorai.001G017100 Gossypium raimondii
GSVIVG01023097001 Vitis vinifera
GSVIVG01037083001 Vitis vinifera
HanXRQChr04g0122371 Helianthus annuus
HanXRQChr04g0122381 Helianthus annuus
HanXRQChr09g0273551 Helianthus annuus
HanXRQChr10g0281301 Helianthus annuus
Haze_26051 Corylus avellana
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla
HPP92_004359 Vanilla planifolia
Hund23253 Selenicereus undatus
Lalb_Chr12g0200311 Lupinus albus
Lalb_Chr13g0299281 Lupinus albus
Lj4g0016027 Lotus japonicus
Lj7C690T11 Lonicera japonica
Lsat_1_v5_gn_7_35381 Lactuca sativa
Manes.16G091500 Manihot esculenta
Mapoly0061s0020 Marchantia polymorpha
MCO03G474 Micromonas commoda
MD02G1098800 Malus domestica
MD02G1098900 Malus domestica
MD02G1099100 Malus domestica
MD15G1221900 Malus domestica
Medtr1g072890 Medicago truncatula
Medtr1g072970 Medicago truncatula
MELO3C015548.2 Cucumis melo
Migut.J00896 Erythranthe guttata
MSTRG.5982 Avicennia marina
Nitab4.5_0001565g0110 Nicotiana tabacum
Nitab4.5_0007773g0020 Nicotiana tabacum
Nn8g40294 Nelumbo nucifera
Oeu055335.1 Olea europaea
Os02g0782100 Oryza sativa ssp. japonica
Peaxi162Scf00191g01112 Petunia axillaris
PGR142G3865 Punica granatum
Phvul.003G128600 Phaseolus vulgaris
Potri.006G137900 Populus trichocarpa
Pp3c1_37650 Physcomitrium patens
Pp3c2_3190 Physcomitrium patens
PRCOL_00004092 Prasinoderma coloniale
Prupe.6G204300 Prunus persica
Prupe.6G204500 Prunus persica
Prupe.7G186700 Prunus persica
Prupe.7G193800 Prunus persica
Psat6g134600 Pisum sativum
Psat7g002920 Pisum sativum
PSO104G0064 Papaver somniferum
PSO421G0331 Papaver somniferum
QL11p002157 Quercus lobata
RcHm_v2.0_Chr2g0095731 Rosa chinensis
Rhsim05G0003800 Rhododendron simsii
Rhsim13G0126900 Rhododendron simsii
Sabra18G0055900 Salix brachista
Sc18g0003470 Simmondsia chinensis
Sc24g0001530 Simmondsia chinensis
Sed0004150 Sechium edule
Sed0021617 Sechium edule
SEGI_16086 Sequoiadendron giganteum
SEGI_25708 Sequoiadendron giganteum
SEGI_37036 Sequoiadendron giganteum
SGA_v2.0_scaffold281G46906 Striga asiatica
SHI02768 Sapria himalayana
SHI02769 Sapria himalayana
SMO361G0459 Selaginella moellendorffii
Solyc07g042380.4 Solanum lycopersicum
Sopen07g021980 Solanum pennellii
Sp4g16630 Schrenkiella parvula
TAR383G0739 Trochodendron aralioides
THA.LOC104809049 Tarenaya hassleriana
Thecc.09G071800 Theobroma cacao
Thhalv10016153m.g Eutrema salsugineum
TPR.G10174 Trifolium pratense
TPR.G10190 Trifolium pratense
TPR.G13945 Trifolium pratense
TPR.G18558 Trifolium pratense
TPR.G34376 Trifolium pratense
TWI32G0648 Tripterygium wilfordii
unitig_744.g24652 Utricularia gibba
vmacro17095 Vaccinium macrocarpon
vmacro17096 Vaccinium macrocarpon
vmacro17113 Vaccinium macrocarpon
vmacro17114 Vaccinium macrocarpon
vmacro17115 Vaccinium macrocarpon
vmacro23083 Vaccinium macrocarpon
vmacro23084 Vaccinium macrocarpon
VMungo1215G0229 Vigna mungo
Zm00001eb173780 Zea mays
Zm00001eb257110 Zea mays

User provided reference genes

Program Settings