Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26580 Brassica napus
A07p18280 Brassica napus
Aa31LG5G8830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2237 Anthoceros agrestis
Actinidia24328 Actinidia chinensis
Actinidia32233 Actinidia chinensis
AL4G21480 Arabidopsis lyrata
AL8G17300 Arabidopsis lyrata
Aqoxy5G00709 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.44W6WI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86SF76 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9DBC1D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AT77GA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TVUZ4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VNWS1A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZE4P1V Arachis hypogaea
AT2G27490 Arabidopsis thaliana
ATR0706G042 Amborella trichopoda
Atru.chr5.1203 Acer truncatum
AUR62022186 Chenopodium quinoa
AUR62031891 Chenopodium quinoa
BcaB01g03075 Brassica carinata
BcaB02g10095 Brassica carinata
BcaC01g04944 Brassica carinata
BcaC02g10888 Brassica carinata
BcaC02g10889 Brassica carinata
BolC3t15527H Brassica oleracea
BolC4t23901H Brassica oleracea
BraA03t11870Z Brassica rapa
BraA07t29544Z Brassica rapa
C03p31840 Brassica napus
C04p24060 Brassica napus
CAN.G174.11 Capsicum annuum
CAN.G255.6 Capsicum annuum
CAN.G255.7 Capsicum annuum
CAN.G337.118 Capsicum annuum
CANSAT25G0267 Cannabis sativa
CANSAT25G2840 Cannabis sativa
CARHR120140 Cardamine hirsuta
Carub.0001s3498 Capsella rubella
Carub.0004s0812 Capsella rubella
Ca_09142_v3 Cicer arietinum L.
Cc01_g06400 Coffea canephora
Cc01_g20600 Coffea canephora
CDE09G0414 Ceratophyllum demersum
Cfa005958 Carpinus fangiana
Ciclev10022066m.g Citrus clementina
CiPaw.08G097800 Carya illinoinensis
ClCG10G010610 Citrullus lanatus
ClCG10G010790 Citrullus lanatus
ClCG10G010800 Citrullus lanatus
COL.COLO4_23391 Corchorus olitorius
Cpa.g.sc11.50 Carica papaya
Cre10.g436150 Chlamydomonas reinhardtii
Cre13.g586250 Chlamydomonas reinhardtii
CsaV3_4G000530 Cucumis sativus L.
CSS0036127 Camellia sinensis var. sinensis
CSS0038127 Camellia sinensis var. sinensis
DCAR_024209 Daucus carota
DCAR_024210 Daucus carota
Dinv19723 Davidia involucrata
Dinv33030 Davidia involucrata
Duzib133G0502 Durio zibethinus
ECA236G1731 Erigeron canadensis
EL10Ac1g00209 Beta vulgaris
EL10Ac4g07959 Beta vulgaris
Eucgr.K03458 Eucalyptus grandis
FAN06G0461 Fragaria x ananassa
FAN10G2101 Fragaria x ananassa
FAN11G1587 Fragaria x ananassa
FAN15G0670 Fragaria x ananassa
FAN20G0831 Fragaria x ananassa
FAN24G3471 Fragaria x ananassa
FAN25G0878 Fragaria x ananassa
FAN27G2002 Fragaria x ananassa
FvH4_2g25231 Fragaria vesca
FvH4_3g05410 Fragaria vesca
FvH4_3g05411 Fragaria vesca
FvH4_7g06070 Fragaria vesca
Glyma.03G212300 Glycine max
Glyma.19G209400 Glycine max
Gohir.A05G412600 Gossypium hirsutum
Gohir.A12G010200 Gossypium hirsutum
Gohir.D04G003400 Gossypium hirsutum
Gohir.D12G010300 Gossypium hirsutum
Gorai.008G010300 Gossypium raimondii
Gorai.012G004500 Gossypium raimondii
GSVIVG01010954001 Vitis vinifera
GSVIVG01027965001 Vitis vinifera
HanXRQChr04g0118161 Helianthus annuus
HanXRQChr04g0118191 Helianthus annuus
HanXRQChr06g0163901 Helianthus annuus
Haze_04883 Corylus avellana
Hund18125 Selenicereus undatus
Hund18126 Selenicereus undatus
Lalb_Chr04g0259781 Lupinus albus
Lj1A33G82 Lonicera japonica
Lj1C0G2 Lonicera japonica
Lj1g0017340 Lotus japonicus
Lj2A1190T61 Lonicera japonica
Lsat_1_v5_gn_8_54720 Lactuca sativa
Manes.12G006300 Manihot esculenta
Manes.13G006100 Manihot esculenta
Mapoly0028s0053 Marchantia polymorpha
MBI19_g41921_MAGBIO Magnolia biondii
MCO11G607 Micromonas commoda
MD03G1282400 Malus domestica
MD11G1303900 Malus domestica
MD12G1063200 Malus domestica
MD14G1128400 Malus domestica
Medtr2g014120 Medicago truncatula
Medtr7g108540 Medicago truncatula
Migut.I00105 Erythranthe guttata
MSTRG.18171 Avicennia marina
MSTRG.21619 Avicennia marina
Nitab4.5_0000051g0210 Nicotiana tabacum
Nitab4.5_0004737g0020 Nicotiana tabacum
Nn4g25856 Nelumbo nucifera
Nn4g25882 Nelumbo nucifera
Oeu024509.1 Olea europaea
Oeu047454.1 Olea europaea
Os01g0360600 Oryza sativa ssp. japonica
Peaxi162Scf00140g01011 Petunia axillaris
PGR031G3621 Punica granatum
PGSC0003DMG400027789 Solanum tuberosum
PGSC0003DMG400027790 Solanum tuberosum
Phvul.001G205200 Phaseolus vulgaris
Potri.008G053601 Populus trichocarpa
Potri.010G206900 Populus trichocarpa
Pp3c2_13260 Physcomitrium patens
Prupe.6G179600 Prunus persica
Prupe.8G257100 Prunus persica
Psat3g022720 Pisum sativum
PSO210G0692 Papaver somniferum
PSO832G2724 Papaver somniferum
QL12p026964 Quercus lobata
QL12p026975 Quercus lobata
RcHm_v2.0_Chr1g0333451 Rosa chinensis
RcHm_v2.0_Chr1g0333491 Rosa chinensis
RcHm_v2.0_Chr1g0333581 Rosa chinensis
RcHm_v2.0_Chr1g0334201 Rosa chinensis
RcHm_v2.0_Chr4g0419031 Rosa chinensis
RcHm_v2.0_Chr4g0419041 Rosa chinensis
RcHm_v2.0_Chr5g0006471 Rosa chinensis
RcHm_v2.0_Chr6g0258301 Rosa chinensis
RcHm_v2.0_Chr6g0293371 Rosa chinensis
RcHm_v2.0_Chr7g0221651 Rosa chinensis
Rhsim13G0013000 Rhododendron simsii
RhsimUnG0168700 Rhododendron simsii
Sabra08G0038800 Salix brachista
SalBow2G1869 Salvia bowleyana
Sc03g0003200 Simmondsia chinensis
Sc03g0003210 Simmondsia chinensis
Sed0016300 Sechium edule
SEGI_05441 Sequoiadendron giganteum
SEGI_13628 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00383 Striga asiatica
SGA_v2.0_scaffold25G10945 Striga asiatica
SHI02445 Sapria himalayana
SHI02446 Sapria himalayana
SMO144G0118 Selaginella moellendorffii
Solyc11g013460.2 Solanum lycopersicum
Sopen11g008460 Solanum pennellii
Sp4g10280 Schrenkiella parvula
Sp4g10360 Schrenkiella parvula
TAR365G0487 Trochodendron aralioides
TAR365G0990 Trochodendron aralioides
TAR636G2430 Trochodendron aralioides
Thecc.01G295900 Theobroma cacao
Thhalv10017190m.g Eutrema salsugineum
Thhalv10017203m.g Eutrema salsugineum
TPR.G9596 Trifolium pratense
TWI14G1088 Tripterygium wilfordii
unitig_8.g3710 Utricularia gibba
vmacro02471 Vaccinium macrocarpon
VMungo1383G2803 Vigna mungo
Zm00001eb041190 Zea mays
Zm00001eb341290 Zea mays

User provided reference genes

Program Settings