Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p11850 Brassica napus
Aa31LG9G16750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1927 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.201 Anthoceros agrestis
Actinidia17594 Actinidia chinensis
Actinidia18979 Actinidia chinensis
Actinidia26258 Actinidia chinensis
Actinidia35044 Actinidia chinensis
Ah.11g047580 Amaranthus hybridus
AL7G51410 Arabidopsis lyrata
Aqoxy3G00519 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6K2AQG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.804MW9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UD1J6F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZGC9F0 Arachis hypogaea
AT5G39040 Arabidopsis thaliana
ATR0827G053 Amborella trichopoda
ATR0827G077 Amborella trichopoda
Atru.chr9.515 Acer truncatum
AUR62021529 Chenopodium quinoa
AUR62039654 Chenopodium quinoa
BcaB06g27263 Brassica carinata
BcaC02g09680 Brassica carinata
BolC4t26136H Brassica oleracea
BraA04t16851Z Brassica rapa
C04p45520 Brassica napus
CAN.G1194.5 Capsicum annuum
CAN.G1228.8 Capsicum annuum
CANSAT64G1179 Cannabis sativa
CARHR263390 Cardamine hirsuta
Carub.0007s3682 Capsella rubella
Ca_21761_v3 Cicer arietinum L.
CBR_g23255 Chara braunii
CBR_g30946 Chara braunii
Cc00_g03450 Coffea canephora
Cc07_g04380 Coffea canephora
CDE09G0210 Ceratophyllum demersum
CDE09G0518 Ceratophyllum demersum
CDE09G0567 Ceratophyllum demersum
Cfa023149 Carpinus fangiana
Ciclev10019251m.g Citrus clementina
CiPaw.03G087300 Carya illinoinensis
CiPaw.04G054100 Carya illinoinensis
ClCG04G011670 Citrullus lanatus
COL.COLO4_02774 Corchorus olitorius
COL.COLO4_24317 Corchorus olitorius
Cpa.g.sc94.77 Carica papaya
Cre02.g083354 Chlamydomonas reinhardtii
CsaV3_1G006130 Cucumis sativus L.
CSS0006194 Camellia sinensis var. sinensis
CSS0014152 Camellia sinensis var. sinensis
CSS0027570 Camellia sinensis var. sinensis
CSS0036214 Camellia sinensis var. sinensis
DCAR_011561 Daucus carota
DCAR_023160 Daucus carota
Dinv17437 Davidia involucrata
Dinv34931 Davidia involucrata
Duzib147G0173 Durio zibethinus
Duzib177G1166 Durio zibethinus
Duzib187G1812 Durio zibethinus
Duzib187G1839 Durio zibethinus
Duzib264G0257 Durio zibethinus
ECA232G3845 Erigeron canadensis
ECA233G1111 Erigeron canadensis
EL10Ac5g11160 Beta vulgaris
Eucgr.I02042 Eucalyptus grandis
Eucgr.K02537 Eucalyptus grandis
FAN14G1320 Fragaria x ananassa
Glyma.05G019400 Glycine max
Glyma.17G080400 Glycine max
Gohir.A05G381000 Gossypium hirsutum
Gohir.A07G067200 Gossypium hirsutum
Gohir.A11G061400 Gossypium hirsutum
Gohir.D04G034400 Gossypium hirsutum
Gohir.D07G071800 Gossypium hirsutum
Gohir.D11G065300 Gossypium hirsutum
Gorai.001G075900 Gossypium raimondii
Gorai.007G070500 Gossypium raimondii
Gorai.012G038700 Gossypium raimondii
GSVIVG01008121001 Vitis vinifera
GSVIVG01032898001 Vitis vinifera
HanXRQChr08g0212891 Helianthus annuus
HanXRQChr15g0489081 Helianthus annuus
Haze_14414 Corylus avellana
Haze_27047 Corylus avellana
Hma1.2p1_0322F.1_g124590 Hydrangea macrophylla
HPP92_019346 Vanilla planifolia
Hund02568 Selenicereus undatus
Lalb_Chr13g0302771 Lupinus albus
Lj4g0022546 Lotus japonicus
Lj5A134G71 Lonicera japonica
Lsat_1_v5_gn_4_103381 Lactuca sativa
Lsat_1_v5_gn_4_172260 Lactuca sativa
Lsat_1_v5_gn_8_42700 Lactuca sativa
Manes.02G056700 Manihot esculenta
Manes.02G057050 Manihot esculenta
Mapoly0075s0079 Marchantia polymorpha
Mapoly0134s0014 Marchantia polymorpha
MBI16_g10856_MAGBIO Magnolia biondii
MBI16_g46295_MAGBIO Magnolia biondii
MCO02G470 Micromonas commoda
MCO09G195 Micromonas commoda
MCO10G070 Micromonas commoda
MCO12G191 Micromonas commoda
Medtr4g109720 Medicago truncatula
Medtr8g032090 Medicago truncatula
MELO3C002042.2 Cucumis melo
Migut.K01263 Erythranthe guttata
MSTRG.11332 Avicennia marina
Nitab4.5_0001485g0030 Nicotiana tabacum
Nitab4.5_0001485g0050 Nicotiana tabacum
Nitab4.5_0001580g0130 Nicotiana tabacum
Nitab4.5_0004846g0010 Nicotiana tabacum
Nitab4.5_0007160g0040 Nicotiana tabacum
Nn4g23472 Nelumbo nucifera
Oeu057200.2 Olea europaea
Os03g0755100 Oryza sativa ssp. japonica
Os04g0642000 Oryza sativa ssp. japonica
Peaxi162Scf00201g00424 Petunia axillaris
Peaxi162Scf00555g00915 Petunia axillaris
PGR004G2364 Punica granatum
PGR044G2190 Punica granatum
PGSC0003DMG400024532 Solanum tuberosum
Phvul.003G183200 Phaseolus vulgaris
Potri.015G059600 Populus trichocarpa
Potri.015G059700 Populus trichocarpa
Potri.015G059800 Populus trichocarpa
Potri.017G097200 Populus trichocarpa
Potri.018G051800 Populus trichocarpa
Pp3c24_8380 Physcomitrium patens
Pp3c2_36840 Physcomitrium patens
Pp3c8_6290 Physcomitrium patens
PRCOL_00001981 Prasinoderma coloniale
PRCOL_00006803 Prasinoderma coloniale
PRCOL_00006843 Prasinoderma coloniale
PRCOL_00007057 Prasinoderma coloniale
Psat4g046360 Pisum sativum
Psat4g046400 Pisum sativum
Psat6g074560 Pisum sativum
PSO339G1772 Papaver somniferum
PSO478G0123 Papaver somniferum
QL02p067219 Quercus lobata
QL10p019992 Quercus lobata
QL93p0053_1000 Quercus lobata
Rhsim08G0075800 Rhododendron simsii
Sabra15G0085000 Salix brachista
Sabra17G0084600 Salix brachista
Sabra18G0048100 Salix brachista
SabraUnG0001800 Salix brachista
SalBow5G3913 Salvia bowleyana
Sc10g0009670 Simmondsia chinensis
Sed0027691 Sechium edule
SEGI_02713 Sequoiadendron giganteum
SEGI_12209 Sequoiadendron giganteum
SEGI_15971 Sequoiadendron giganteum
SEGI_21799 Sequoiadendron giganteum
SEGI_37488 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11737 Striga asiatica
SGA_v2.0_scaffold733G53532 Striga asiatica
SMO134G0255 Selaginella moellendorffii
SMO201G0093 Selaginella moellendorffii
Solyc03g114950.2 Solanum lycopersicum
Sopen03g034030 Solanum pennellii
Sp7g02870 Schrenkiella parvula
TAR383G0180 Trochodendron aralioides
TAR629G1625 Trochodendron aralioides
THA.LOC104822820 Tarenaya hassleriana
Thecc.03G104600 Theobroma cacao
Thecc.04G098000 Theobroma cacao
Thecc.04G098200 Theobroma cacao
Thhalv10027684m.g Eutrema salsugineum
TPR.G1996 Trifolium pratense
TWI34G0290 Tripterygium wilfordii
unitig_32.g10756 Utricularia gibba
unitig_748.g8419 Utricularia gibba
vmacro18139 Vaccinium macrocarpon
VMungo1215G0543 Vigna mungo
Zm00001eb214670 Zea mays

User provided reference genes

Program Settings