Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p21890 Brassica napus
A07p43090 Brassica napus
Aa31LG4G7900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1361 Anthoceros agrestis
Actinidia02593 Actinidia chinensis
Actinidia02594 Actinidia chinensis
Actinidia23041 Actinidia chinensis
Actinidia23047 Actinidia chinensis
Actinidia27024 Actinidia chinensis
Ah.05g172620 Amaranthus hybridus
AL2G38040 Arabidopsis lyrata
Aqoxy5G02474 Aquilegia oxysepala
Aqoxy5G02504 Aquilegia oxysepala
Aqoxy5G02505 Aquilegia oxysepala
Aqoxy5G02506 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PQY0NP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WJPD8A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y09WXD Arachis hypogaea
AT1G77800 Arabidopsis thaliana
ATR0121G011 Amborella trichopoda
Atru.chr13.1317 Acer truncatum
Atru.chr13.1361 Acer truncatum
AUR62004693 Chenopodium quinoa
AUR62023609 Chenopodium quinoa
BcaB03g15920 Brassica carinata
BcaB05g25080 Brassica carinata
BcaC03g15776 Brassica carinata
BcaC08g47623 Brassica carinata
BolC2t09533H Brassica oleracea
BolC6t40196H Brassica oleracea
BraA02t07190Z Brassica rapa
BraA07t31831Z Brassica rapa
C02p35180 Brassica napus
C06p51740 Brassica napus
CAN.G255.17 Capsicum annuum
CAN.G255.18 Capsicum annuum
CANSAT25G1161 Cannabis sativa
CARHR071300 Cardamine hirsuta
Carub.0002s2470 Capsella rubella
Ca_25762_v3 Cicer arietinum L.
CBR_g22311 Chara braunii
Cc00_g02330 Coffea canephora
CDE06G0857 Ceratophyllum demersum
CDE06G1078 Ceratophyllum demersum
CDE06G1790 Ceratophyllum demersum
CDE06G1977 Ceratophyllum demersum
CDE10G1110 Ceratophyllum demersum
Cfa015958 Carpinus fangiana
Ciclev10000027m.g Citrus clementina
CiPaw.05G229000 Carya illinoinensis
CiPaw.05G229100 Carya illinoinensis
CiPaw.06G024800 Carya illinoinensis
ClCG03G009090 Citrullus lanatus
COL.COLO4_03393 Corchorus olitorius
COL.COLO4_03394 Corchorus olitorius
Cpa.g.c31003 Carica papaya
Cpa.g.sc795.1 Carica papaya
CsaV3_5G023530 Cucumis sativus L.
CSS0017753 Camellia sinensis var. sinensis
CSS0024515 Camellia sinensis var. sinensis
CSS0035700 Camellia sinensis var. sinensis
DCAR_014282 Daucus carota
DCAR_031233 Daucus carota
Dinv26719 Davidia involucrata
Dinv27384 Davidia involucrata
Dinv27385 Davidia involucrata
Duzib041G0227 Durio zibethinus
Duzib093G1782 Durio zibethinus
ECA246G2386 Erigeron canadensis
EL10Ac1g00040 Beta vulgaris
Eucgr.F03741 Eucalyptus grandis
FAN04G0001 Fragaria x ananassa
FAN08G0909 Fragaria x ananassa
FAN13G2877 Fragaria x ananassa
FAN18G1206 Fragaria x ananassa
FvH4_5g38940 Fragaria vesca
Glyma.04G253800 Glycine max
Glyma.06G108500 Glycine max
Gohir.A01G187600 Gossypium hirsutum
Gohir.A06G040800 Gossypium hirsutum
Gohir.D01G182100 Gossypium hirsutum
Gohir.D06G041800 Gossypium hirsutum
Gorai.002G220300 Gossypium raimondii
Gorai.010G047000 Gossypium raimondii
GSVIVG01008944001 Vitis vinifera
HanXRQChr05g0150511 Helianthus annuus
Haze_00524 Corylus avellana
Haze_00525 Corylus avellana
Hma1.2p1_0221F.1_g093170 Hydrangea macrophylla
HPP92_004068 Vanilla planifolia
HPP92_004120 Vanilla planifolia
Hund27061 Selenicereus undatus
Lalb_Chr08g0241721 Lupinus albus
Lalb_Chr11g0065681 Lupinus albus
Lalb_Chr11g0065691 Lupinus albus
Lalb_Chr17g0344031 Lupinus albus
Lj1g0013609 Lotus japonicus
Lj4C579G4 Lonicera japonica
Lj4C579T6 Lonicera japonica
Lsat_1_v5_gn_6_109621 Lactuca sativa
Lsat_1_v5_gn_8_139480 Lactuca sativa
Manes.02G158666 Manihot esculenta
Manes.02G158699 Manihot esculenta
Manes.02G158732 Manihot esculenta
Manes.18G072800 Manihot esculenta
MBI01_g18810_MAGBIO Magnolia biondii
MBI03_g11136_MAGBIO Magnolia biondii
MBI06_g01044_MAGBIO Magnolia biondii
MBI18_g38455_MAGBIO Magnolia biondii
MD08G1173200 Malus domestica
MD15G1358500 Malus domestica
Medtr3g073320 Medicago truncatula
Medtr8g005245 Medicago truncatula
MELO3C022786.2 Cucumis melo
Migut.C01191 Erythranthe guttata
MSTRG.1487 Avicennia marina
MSTRG.25418 Avicennia marina
Nitab4.5_0000051g0110 Nicotiana tabacum
Nitab4.5_0002496g0040 Nicotiana tabacum
Nn5g27956 Nelumbo nucifera
Oeu030027.4 Olea europaea
Oeu043794.4 Olea europaea
Oeu043795.1 Olea europaea
Os02g0768750 Oryza sativa ssp. japonica
Os02g0768800 Oryza sativa ssp. japonica
Os06g0209300 Oryza sativa ssp. japonica
Peaxi162Scf00476g00039 Petunia axillaris
PGR042G3777 Punica granatum
PGSC0003DMG400027792 Solanum tuberosum
Phvul.009G025800 Phaseolus vulgaris
Potri.002G089400 Populus trichocarpa
Potri.005G171800 Populus trichocarpa
Pp3c11_12900 Physcomitrium patens
PRCOL_00001313 Prasinoderma coloniale
Prupe.1G506100 Prunus persica
Psat1g136880 Pisum sativum
Psat5g134160 Pisum sativum
Psat7g122320 Pisum sativum
PSO017G6492 Papaver somniferum
PSO170G0537 Papaver somniferum
QL12p035319 Quercus lobata
RcHm_v2.0_Chr7g0240911 Rosa chinensis
Rhsim06G0109200 Rhododendron simsii
Rhsim06G0118900 Rhododendron simsii
Sabra02G0070400 Salix brachista
Sabra05G0129300 Salix brachista
SalBow7G0935 Salvia bowleyana
SalBow7G4807 Salvia bowleyana
Sc01g0001560 Simmondsia chinensis
Sed0005676 Sechium edule
SEGI_09945 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32437 Striga asiatica
SGA_v2.0_scaffold24G10505 Striga asiatica
SHI31215 Sapria himalayana
SHI31217 Sapria himalayana
SHI31223 Sapria himalayana
SHI48839 Sapria himalayana
SMO351G0114 Selaginella moellendorffii
Solyc11g013530.3 Solanum lycopersicum
Sopen11g008560 Solanum pennellii
Sp5g32980 Schrenkiella parvula
TAR197G0005 Trochodendron aralioides
THA.LOC104800176 Tarenaya hassleriana
THA.LOC104813639 Tarenaya hassleriana
Thecc.08G116700 Theobroma cacao
Thhalv10018012m.g Eutrema salsugineum
TPR.G32944 Trifolium pratense
TWI12G1217 Tripterygium wilfordii
TWI36G0588 Tripterygium wilfordii
TWI56G1037 Tripterygium wilfordii
unitig_0.g2128 Utricularia gibba
unitig_747.g21477 Utricularia gibba
vmacro12529 Vaccinium macrocarpon
VMungo1309G0254 Vigna mungo
Zm00001eb051540 Zea mays
Zm00001eb051550 Zea mays
Zm00001eb193530 Zea mays
Zm00001eb256170 Zea mays
Zm00001eb268330 Zea mays
Zm00001eb278990 Zea mays
Zm00001eb426110 Zea mays

User provided reference genes

Program Settings