Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p26950 Brassica napus
A08p26960 Brassica napus
A09p39220 Brassica napus
Aa31LG2G6960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3741 Anthoceros agrestis
Actinidia14906 Actinidia chinensis
Actinidia16665 Actinidia chinensis
Ah.03g138230 Amaranthus hybridus
AL1G39980 Arabidopsis lyrata
AL6G31240 Arabidopsis lyrata
Aqoxy3G00265 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DTRW9U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VKD07K Arachis hypogaea
AT1G25350 Arabidopsis thaliana
AT1G68325 Arabidopsis thaliana
AT5G19720 Arabidopsis thaliana
ATR0691G154 Amborella trichopoda
Atru.chr11.139 Acer truncatum
Atru.chr11.140 Acer truncatum
Atru.chr7.1031 Acer truncatum
AUR62002537 Chenopodium quinoa
AUR62002847 Chenopodium quinoa
AUR62023655 Chenopodium quinoa
AUR62037316 Chenopodium quinoa
BcaB03g12025 Brassica carinata
BcaB03g12026 Brassica carinata
BcaC01g01691 Brassica carinata
BcaC05g26473 Brassica carinata
BcaC05g26679 Brassica carinata
BolC3t19594H Brassica oleracea
BolC5t31249H Brassica oleracea
BraA08t34641Z Brassica rapa
BraA08t34642Z Brassica rapa
BraA09t39421Z Brassica rapa
C03p72940 Brassica napus
C05p25160 Brassica napus
CAN.G610.65 Capsicum annuum
CANSAT56G0741 Cannabis sativa
CARHR026140 Cardamine hirsuta
CARHR061010 Cardamine hirsuta
CARHR061030 Cardamine hirsuta
Carub.0001s2516 Capsella rubella
Carub.0002s1482 Capsella rubella
Carub.0003s3008 Capsella rubella
Ca_11159_v3 Cicer arietinum L.
Cc11_g09920 Coffea canephora
CDE06G1000 Ceratophyllum demersum
CDE07G1238 Ceratophyllum demersum
Cfa015867 Carpinus fangiana
Ciclev10014320m.g Citrus clementina
CiPaw.05G239400 Carya illinoinensis
CiPaw.06G018700 Carya illinoinensis
ClCG02G012120 Citrullus lanatus
ClCG11G004350 Citrullus lanatus
COL.COLO4_06769 Corchorus olitorius
COL.COLO4_07078 Corchorus olitorius
Cpa.g.sc61.18 Carica papaya
Cpa.g.sc798.2 Carica papaya
Cre14.g614900 Chlamydomonas reinhardtii
CsaV3_2G014770 Cucumis sativus L.
CsaV3_2G016280 Cucumis sativus L.
CSS0016974 Camellia sinensis var. sinensis
CSS0034691 Camellia sinensis var. sinensis
CSS0047778 Camellia sinensis var. sinensis
DCAR_007251 Daucus carota
DCAR_021035 Daucus carota
DCAR_023648 Daucus carota
Dinv21062 Davidia involucrata
Dinv21063 Davidia involucrata
Dinv31622 Davidia involucrata
Duzib248G1131 Durio zibethinus
Duzib251G0305 Durio zibethinus
ECA233G2275 Erigeron canadensis
EL10Ac6g14344 Beta vulgaris
EL10Ac7g17806 Beta vulgaris
Eucgr.B03004 Eucalyptus grandis
FAN07G0461 Fragaria x ananassa
FAN12G2409 Fragaria x ananassa
FAN12G3668 Fragaria x ananassa
FAN17G1418 Fragaria x ananassa
FAN22G1881 Fragaria x ananassa
FvH4_4g27080 Fragaria vesca
Glyma.06G203400 Glycine max
Glyma.10G272800 Glycine max
Glyma.17G205500 Glycine max
Glyma.20G117100 Glycine max
Glyma.20G117150 Glycine max
Gohir.A05G321600 Gossypium hirsutum
Gohir.D05G323900 Gossypium hirsutum
Gorai.009G347600 Gossypium raimondii
GSVIVG01011871001 Vitis vinifera
GSVIVG01018308001 Vitis vinifera
HanXRQChr12g0371141 Helianthus annuus
HanXRQChr16g0508691 Helianthus annuus
Haze_00619 Corylus avellana
Haze_26608 Corylus avellana
Hma1.2p1_0061F.1_g033680 Hydrangea macrophylla
HPP92_021791 Vanilla planifolia
Hund20774 Selenicereus undatus
Lalb_Chr02g0145891 Lupinus albus
Lalb_Chr06g0166001 Lupinus albus
Lalb_Chr21g0308841 Lupinus albus
Lj4g0028120 Lotus japonicus
Lj6C756T1 Lonicera japonica
Lsat_1_v5_gn_2_80001 Lactuca sativa
Lsat_1_v5_gn_8_40760 Lactuca sativa
Manes.06G066500 Manihot esculenta
Manes.14G104300 Manihot esculenta
Mapoly0039s0055 Marchantia polymorpha
MBI16_g23453_MAGBIO Magnolia biondii
MCO01G766 Micromonas commoda
MD13G1039800 Malus domestica
MD16G1040700 Malus domestica
Medtr1g110430 Medicago truncatula
MELO3C020839.2 Cucumis melo
MELO3C023301.2 Cucumis melo
Migut.L01049 Erythranthe guttata
Migut.O00776 Erythranthe guttata
MSTRG.2228 Avicennia marina
MSTRG.850 Avicennia marina
Nitab4.5_0001616g0020 Nicotiana tabacum
Nitab4.5_0003867g0050 Nicotiana tabacum
Nn4g23889 Nelumbo nucifera
Nn5g28146 Nelumbo nucifera
Oeu054996.3 Olea europaea
Oeu059498.1 Olea europaea
Os01g0185200 Oryza sativa ssp. japonica
Os05g0182800 Oryza sativa ssp. japonica
Peaxi162Scf00753g00332 Petunia axillaris
PGR102G0253 Punica granatum
PGSC0003DMG400014572 Solanum tuberosum
Phvul.007G028800 Phaseolus vulgaris
Potri.008G122200 Populus trichocarpa
Potri.010G122866 Populus trichocarpa
Potri.010G122932 Populus trichocarpa
Pp3c1_19680 Physcomitrium patens
PRCOL_00001723 Prasinoderma coloniale
Prupe.1G313400 Prunus persica
Psat6g226160 Pisum sativum
PSO063G7347 Papaver somniferum
PSO782G3382 Papaver somniferum
QL01p040852 Quercus lobata
RcHm_v2.0_Chr1g0324531 Rosa chinensis
RcHm_v2.0_Chr1g0324791 Rosa chinensis
RcHm_v2.0_Chr1g0324801 Rosa chinensis
RcHm_v2.0_Chr4g0434881 Rosa chinensis
RcHm_v2.0_Chr6g0267171 Rosa chinensis
RcHm_v2.0_Chr6g0267551 Rosa chinensis
RcHm_v2.0_Chr6g0267561 Rosa chinensis
RcHm_v2.0_Chr6g0267571 Rosa chinensis
Rhsim09G0106300 Rhododendron simsii
Sabra08G0092800 Salix brachista
Sabra10G0093000 Salix brachista
SalBow8G3975 Salvia bowleyana
SalBow8G5161 Salvia bowleyana
Sc14g0007390 Simmondsia chinensis
Sed0001283 Sechium edule
Sed0019956 Sechium edule
SEGI_13900 Sequoiadendron giganteum
SEGI_36555 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13114 Striga asiatica
SGA_v2.0_scaffold38G14957 Striga asiatica
SHI32754 Sapria himalayana
SMO347G0322 Selaginella moellendorffii
SMO361G0577 Selaginella moellendorffii
SMO361G0624 Selaginella moellendorffii
Solyc05g009220.3 Solanum lycopersicum
Sopen05g004940 Solanum pennellii
Sp1g22870 Schrenkiella parvula
TAR371G0094 Trochodendron aralioides
TAR371G0884 Trochodendron aralioides
TAR371G0932 Trochodendron aralioides
TAR374G1395 Trochodendron aralioides
THA.LOC104821915 Tarenaya hassleriana
Thecc.07G144700 Theobroma cacao
Thhalv10006840m.g Eutrema salsugineum
TPR.G4913 Trifolium pratense
TWI79G1774 Tripterygium wilfordii
unitig_22.g5575 Utricularia gibba
unitig_24.g30583 Utricularia gibba
vmacro10571 Vaccinium macrocarpon
VMungo0720G1962 Vigna mungo
Zm00001eb121810 Zea mays
Zm00001eb337800 Zea mays

User provided reference genes

Program Settings