Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p35540 Brassica napus
A09p06410 Brassica napus
Aa31LG11G3950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3123 Anthoceros agrestis
Actinidia11708 Actinidia chinensis
Actinidia17722 Actinidia chinensis
Ah.13g077320 Amaranthus hybridus
AL6G36310 Arabidopsis lyrata
Aqoxy1G01346 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9JB77L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HX4K8L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UGM12E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VIS9FS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W8I5D1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XWZQ7T Arachis hypogaea
AT5G24710 Arabidopsis thaliana
ATR0620G024 Amborella trichopoda
ATR0620G069 Amborella trichopoda
ATR0620G123 Amborella trichopoda
ATR0620G130 Amborella trichopoda
Atru.chr3.2031 Acer truncatum
AUR62018429 Chenopodium quinoa
AUR62021005 Chenopodium quinoa
BcaC04g23548 Brassica carinata
BcaNung01252 Brassica carinata
BcaNung07352 Brassica carinata
BolC7t44829H Brassica oleracea
BolC9t53629H Brassica oleracea
BraA06t26479Z Brassica rapa
BraA09t36285Z Brassica rapa
C07p43000 Brassica napus
C09p07140 Brassica napus
CAN.G1379.33 Capsicum annuum
CANSAT01G1610 Cannabis sativa
CARHR188770 Cardamine hirsuta
Carub.0006s2256 Capsella rubella
Ca_09260_v3 Cicer arietinum L.
CBR_g3034 Chara braunii
CBR_g53812 Chara braunii
CBR_g53818 Chara braunii
Cc02_g36830 Coffea canephora
CDE09G0721 Ceratophyllum demersum
CDE09G1422 Ceratophyllum demersum
Cfa004406 Carpinus fangiana
Ciclev10018511m.g Citrus clementina
CiPaw.01G000300 Carya illinoinensis
CiPaw.01G000400 Carya illinoinensis
ClCG09G008380 Citrullus lanatus
COL.COLO4_07112 Corchorus olitorius
Cpa.g.sc17.15 Carica papaya
Cpa.g.sc17.16 Carica papaya
Cpa.g.sc17.17 Carica papaya
Cpa.g.sc17.18 Carica papaya
Cpa.g.sc17.19 Carica papaya
Cre12.g535350 Chlamydomonas reinhardtii
CsaV3_7G026710 Cucumis sativus L.
CSS0008361 Camellia sinensis var. sinensis
CSS0011425 Camellia sinensis var. sinensis
CSS0016348 Camellia sinensis var. sinensis
CSS0044155 Camellia sinensis var. sinensis
DCAR_029311 Daucus carota
DCAR_029312 Daucus carota
DCAR_029313 Daucus carota
DCAR_029787 Daucus carota
DCAR_032162 Daucus carota
DCAR_032163 Daucus carota
DCAR_032259 Daucus carota
DCAR_032260 Daucus carota
Dinv30970 Davidia involucrata
Duzib128G1568 Durio zibethinus
Duzib150G0949 Durio zibethinus
Duzib248G1591 Durio zibethinus
ECA240G0535 Erigeron canadensis
EL10Ac3g07331 Beta vulgaris
Eucgr.B01361 Eucalyptus grandis
FAN15G1274 Fragaria x ananassa
FAN24G1237 Fragaria x ananassa
FAN27G0645 Fragaria x ananassa
FAN27G0740 Fragaria x ananassa
FvH4_2g17560 Fragaria vesca
Glyma.03G226400 Glycine max
Glyma.18G148901 Glycine max
Glyma.19G223400 Glycine max
Glyma.20G050100 Glycine max
Gohir.A08G016300 Gossypium hirsutum
Gohir.A08G023424 Gossypium hirsutum
Gohir.A08G082000 Gossypium hirsutum
Gohir.D08G026350 Gossypium hirsutum
Gohir.D08G026400 Gossypium hirsutum
Gohir.D08G091400 Gossypium hirsutum
Gorai.004G022800 Gossypium raimondii
Gorai.004G022900 Gossypium raimondii
Gorai.004G096900 Gossypium raimondii
GSVIVG01029823001 Vitis vinifera
GSVIVG01038281001 Vitis vinifera
HanXRQChr14g0448821 Helianthus annuus
HanXRQChr15g0468281 Helianthus annuus
Haze_14997 Corylus avellana
Haze_14998 Corylus avellana
Hma1.2p1_0052F.1_g030180 Hydrangea macrophylla
Hma1.2p1_0105F.1_g050850 Hydrangea macrophylla
HPP92_021469 Vanilla planifolia
Hund19080 Selenicereus undatus
Hund24556 Selenicereus undatus
Hund25753 Selenicereus undatus
Lalb_Chr15g0077831 Lupinus albus
Lalb_Chr18g0046271 Lupinus albus
Lj1g0026129 Lotus japonicus
Lj5C312G5 Lonicera japonica
Lj9C240T5 Lonicera japonica
Lsat_1_v5_gn_7_68120 Lactuca sativa
Manes.11G105500 Manihot esculenta
Mapoly0031s0124 Marchantia polymorpha
MBI07_g10943_MAGBIO Magnolia biondii
MD05G1154700 Malus domestica
MD10G1148800 Malus domestica
MD10G1148900 Malus domestica
MD10G1149000 Malus domestica
Medtr7g111080 Medicago truncatula
MELO3C021123.2 Cucumis melo
Migut.B00692 Erythranthe guttata
MSTRG.27897 Avicennia marina
Nitab4.5_0000399g0070 Nicotiana tabacum
Nitab4.5_0004090g0090 Nicotiana tabacum
Nitab4.5_0004668g0010 Nicotiana tabacum
Nitab4.5_0005421g0020 Nicotiana tabacum
Nitab4.5_0011890g0010 Nicotiana tabacum
Nn3g20244 Nelumbo nucifera
Oeu016865.1 Olea europaea
Os01g0653350 Oryza sativa ssp. japonica
Os01g0653800 Oryza sativa ssp. japonica
Os05g0297001 Oryza sativa ssp. japonica
Peaxi162Scf00071g00133 Petunia axillaris
Peaxi162Scf00194g00629 Petunia axillaris
PGSC0003DMG400018227 Solanum tuberosum
Phvul.001G220300 Phaseolus vulgaris
Potri.006G081800 Populus trichocarpa
Pp3c1_36370 Physcomitrium patens
PRCOL_00001888 Prasinoderma coloniale
Prupe.8G187800 Prunus persica
Psat1g150120 Pisum sativum
Psat3g015640 Pisum sativum
PSO541G4460 Papaver somniferum
PSO675G1011 Papaver somniferum
QL11p018449 Quercus lobata
RcHm_v2.0_Chr6g0282501 Rosa chinensis
Rhsim11G0111700 Rhododendron simsii
Sabra06G0061800 Salix brachista
SalBow4G0229 Salvia bowleyana
SalBow4G1329 Salvia bowleyana
Sc10g0005440 Simmondsia chinensis
Sc10g0006280 Simmondsia chinensis
Sed0004563 Sechium edule
Sed0007544 Sechium edule
Sed0021054 Sechium edule
SEGI_06427 Sequoiadendron giganteum
SGA_v2.0_scaffold311G48230 Striga asiatica
SHI06529 Sapria himalayana
SHI06530 Sapria himalayana
SHI06531 Sapria himalayana
SHI06532 Sapria himalayana
SHI06533 Sapria himalayana
SHI06534 Sapria himalayana
SHI06540 Sapria himalayana
SMO116G0300 Selaginella moellendorffii
SMO334G0084 Selaginella moellendorffii
SMO353G0154 Selaginella moellendorffii
Solyc01g102510.4 Solanum lycopersicum
Sopen01g044950 Solanum pennellii
Sp2g22700 Schrenkiella parvula
TAR624G0023 Trochodendron aralioides
TAR624G1107 Trochodendron aralioides
THA.LOC104814960 Tarenaya hassleriana
Thecc.09G202800 Theobroma cacao
Thhalv10003520m.g Eutrema salsugineum
TPR.G8371 Trifolium pratense
TPR.G8375 Trifolium pratense
TWI38G1822 Tripterygium wilfordii
TWI39G0913 Tripterygium wilfordii
unitig_699.g19829 Utricularia gibba
vmacro01642 Vaccinium macrocarpon
vmacro01643 Vaccinium macrocarpon
vmacro01644 Vaccinium macrocarpon
VMungo0720G1425 Vigna mungo
VMungo1383G1216 Vigna mungo
Zm00001eb158110 Zea mays
Zm00001eb359400 Zea mays

User provided reference genes

Program Settings