Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03210 Brassica napus
A06p18120 Brassica napus
A08p12660 Brassica napus
A09p50210 Brassica napus
A10p04150 Brassica napus
Aa31LG10G12160 Aethionema arabicum
Aa31LG1G23570 Aethionema arabicum
Actinidia09299 Actinidia chinensis
Actinidia17671 Actinidia chinensis
Ah.04g164170 Amaranthus hybridus
AL5G38830 Arabidopsis lyrata
Aqoxy2G00237 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MH7EBB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZS3MQE Arachis hypogaea
AT3G57290 Arabidopsis thaliana
ATR0329G046 Amborella trichopoda
Atru.chr1.1209 Acer truncatum
AUR62024517 Chenopodium quinoa
AUR62026108 Chenopodium quinoa
BcaB02g07613 Brassica carinata
BcaB02g08321 Brassica carinata
BcaC02g09927 Brassica carinata
BcaC07g40058 Brassica carinata
BcaC07g40060 Brassica carinata
BolC4t25065H Brassica oleracea
BolC8t50881H Brassica oleracea
BraA04t16043Z Brassica rapa
BraA04t18461Z Brassica rapa
BraA09t40471Z Brassica rapa
C04p35090 Brassica napus
C08p32690 Brassica napus
CAN.G1656.4 Capsicum annuum
CANSAT80G0981 Cannabis sativa
CANSAT80G2233 Cannabis sativa
CARHR167490 Cardamine hirsuta
Carub.0005s2414 Capsella rubella
Ca_12264_v3 Cicer arietinum L.
Ca_30550_v3 Cicer arietinum L.
CBR_g48694 Chara braunii
Cc00_g29150 Coffea canephora
Cc06_g18160 Coffea canephora
Cc06_g18170 Coffea canephora
CDE08G1224 Ceratophyllum demersum
CDE08G1324 Ceratophyllum demersum
CDE09G0956 Ceratophyllum demersum
CDE09G1093 Ceratophyllum demersum
Cfa000245 Carpinus fangiana
Cfa016772 Carpinus fangiana
Cfa017072 Carpinus fangiana
Cfa022230 Carpinus fangiana
Ciclev10004983m.g Citrus clementina
CiPaw.09G040700 Carya illinoinensis
CiPaw.10G035800 Carya illinoinensis
ClCG04G003770 Citrullus lanatus
COL.COLO4_36514 Corchorus olitorius
Cpa.g.sc182.25 Carica papaya
Cre12.g498100 Chlamydomonas reinhardtii
CsaV3_4G027730 Cucumis sativus L.
DCAR_020512 Daucus carota
Dinv39664 Davidia involucrata
Duzib093G1716 Durio zibethinus
Duzib128G0558 Durio zibethinus
ECA232G2680 Erigeron canadensis
EL10Ac3g07146 Beta vulgaris
Eucgr.A02306 Eucalyptus grandis
FAN02G1912 Fragaria x ananassa
FAN05G4136 Fragaria x ananassa
FAN14G2785 Fragaria x ananassa
FvH4_6g24580 Fragaria vesca
Glyma.02G187100 Glycine max
Glyma.10G106100 Glycine max
Gohir.A09G048100 Gossypium hirsutum
Gohir.A09G249400 Gossypium hirsutum
Gohir.A11G217200 Gossypium hirsutum
Gohir.A11G309500 Gossypium hirsutum
Gohir.A11G309600 Gossypium hirsutum
Gohir.D06G106300 Gossypium hirsutum
Gohir.D07G001450 Gossypium hirsutum
Gohir.D07G177400 Gossypium hirsutum
Gohir.D07G228450 Gossypium hirsutum
Gohir.D11G130650 Gossypium hirsutum
Gohir.D11G324900 Gossypium hirsutum
Gohir.D11G325000 Gossypium hirsutum
Gorai.007G170700 Gossypium raimondii
Gorai.007G355700 Gossypium raimondii
Gorai.007G355800 Gossypium raimondii
Gorai.010G177900 Gossypium raimondii
GSVIVG01005045001 Vitis vinifera
HanXRQChr01g0012641 Helianthus annuus
HanXRQChr08g0229101 Helianthus annuus
HanXRQChr09g0258441 Helianthus annuus
HanXRQChr12g0369171 Helianthus annuus
Haze_19783 Corylus avellana
Haze_21124 Corylus avellana
Haze_26473 Corylus avellana
Hma1.2p1_0110F.1_g052940 Hydrangea macrophylla
HPP92_006701 Vanilla planifolia
Hund12364 Selenicereus undatus
Hund15356 Selenicereus undatus
Lalb_Chr08g0235171 Lupinus albus
Lalb_Chr08g0235181 Lupinus albus
Lalb_Chr23g0274141 Lupinus albus
Lj1C1124G13 Lonicera japonica
Lj5g0010982 Lotus japonicus
Lsat_1_v5_gn_8_117161 Lactuca sativa
Manes.03G083194 Manihot esculenta
Manes.03G083210 Manihot esculenta
Manes.03G083226 Manihot esculenta
Manes.03G083258 Manihot esculenta
Manes.03G083290 Manihot esculenta
Manes.03G083322 Manihot esculenta
Manes.03G083338 Manihot esculenta
Manes.09G010300 Manihot esculenta
Manes.09G010401 Manihot esculenta
Mapoly0007s0188 Marchantia polymorpha
MCO16G302 Micromonas commoda
MD12G1083100 Malus domestica
MD14G1078200 Malus domestica
Medtr1g051820 Medicago truncatula
Medtr2g079780 Medicago truncatula
MELO3C026327.2 Cucumis melo
Migut.J01716 Erythranthe guttata
Migut.K00104 Erythranthe guttata
MSTRG.6406 Avicennia marina
Nitab4.5_0000364g0010 Nicotiana tabacum
Nitab4.5_0000677g0120 Nicotiana tabacum
Nn2g15108 Nelumbo nucifera
Nn7g36420 Nelumbo nucifera
Oeu033903.1 Olea europaea
Os07g0167000 Oryza sativa ssp. japonica
Os07g0222300 Oryza sativa ssp. japonica
Os07g0503700 Oryza sativa ssp. japonica
Peaxi162Scf00069g01214 Petunia axillaris
PGR004G2306 Punica granatum
PGSC0003DMG400029829 Solanum tuberosum
Phvul.007G250100 Phaseolus vulgaris
Potri.006G047600 Populus trichocarpa
Potri.016G043800 Populus trichocarpa
Pp3c20_5690 Physcomitrium patens
Pp3c24_6740 Physcomitrium patens
Pp3c8_15010 Physcomitrium patens
PRCOL_00006598 Prasinoderma coloniale
Prupe.7G052700 Prunus persica
Psat2g115640 Pisum sativum
Psat4g047240 Pisum sativum
Psat5g243200 Pisum sativum
Psat5g243240 Pisum sativum
Psat5g246160 Pisum sativum
Psat6g117080 Pisum sativum
PSO675G6801 Papaver somniferum
PSO675G7866 Papaver somniferum
QL07p003998 Quercus lobata
RcHm_v2.0_Chr3g0483891 Rosa chinensis
Rhsim04G0106600 Rhododendron simsii
Sabra06G0033100 Salix brachista
Sabra16G0048600 Salix brachista
SalBow6G0750 Salvia bowleyana
Sc19g0008510 Simmondsia chinensis
Sed0005407 Sechium edule
Sed0024607 Sechium edule
SEGI_12156 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30370 Striga asiatica
SMO223G0020 Selaginella moellendorffii
Solyc10g079880.2 Solanum lycopersicum
Sopen10g030490 Solanum pennellii
Sp4g23800 Schrenkiella parvula
Sp5g05310 Schrenkiella parvula
TAR623G1380 Trochodendron aralioides
TAR633G0793 Trochodendron aralioides
THA.LOC104801979 Tarenaya hassleriana
THA.LOC104824428 Tarenaya hassleriana
Thecc.05G303700 Theobroma cacao
Thhalv10005924m.g Eutrema salsugineum
TPR.G23383 Trifolium pratense
TPR.G29633 Trifolium pratense
TPR.G8064 Trifolium pratense
TWI53G0167 Tripterygium wilfordii
TWI77G0522 Tripterygium wilfordii
vmacro09050 Vaccinium macrocarpon
VMungo0720G2843 Vigna mungo
Zm00001eb019980 Zea mays
Zm00001eb020310 Zea mays
Zm00001eb022800 Zea mays
Zm00001eb095240 Zea mays
Zm00001eb131780 Zea mays
Zm00001eb184380 Zea mays
Zm00001eb184800 Zea mays
Zm00001eb228750 Zea mays
Zm00001eb303380 Zea mays
Zm00001eb312750 Zea mays
Zm00001eb313750 Zea mays
Zm00001eb314210 Zea mays
Zm00001eb392860 Zea mays
Zm00001eb414290 Zea mays

User provided reference genes

Program Settings