Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37840 Brassica napus
A05p41240 Brassica napus
A06p38610 Brassica napus
Aa31LG5G17500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3515 Anthoceros agrestis
Actinidia01464 Actinidia chinensis
Actinidia14303 Actinidia chinensis
Actinidia17338 Actinidia chinensis
Actinidia40256 Actinidia chinensis
Ah.04g164890 Amaranthus hybridus
Ah.06g184090 Amaranthus hybridus
Ah.06g184100 Amaranthus hybridus
AL3G18100 Arabidopsis lyrata
AL8G22390 Arabidopsis lyrata
Aqoxy2G02982 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KA48HN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LR2V9P Arachis hypogaea
AT3G06930 Arabidopsis thaliana
AT5G49020 Arabidopsis thaliana
ATR0796G199 Amborella trichopoda
Atru.chr4.2839 Acer truncatum
AUR62008114 Chenopodium quinoa
AUR62028692 Chenopodium quinoa
BcaB07g34210 Brassica carinata
BcaB07g34211 Brassica carinata
BcaC01g00537 Brassica carinata
BcaC03g17691 Brassica carinata
BcaC05g29770 Brassica carinata
BcaC05g29823 Brassica carinata
BolC2t11770H Brassica oleracea
BolC3t16423H Brassica oleracea
BolC5t34700H Brassica oleracea
BolC7t44488H Brassica oleracea
BraA02t08766Z Brassica rapa
BraA05t22847Z Brassica rapa
BraA06t26776Z Brassica rapa
C02p57000 Brassica napus
C03p41410 Brassica napus
C03p81170 Brassica napus
C05p60460 Brassica napus
C07p39650 Brassica napus
CAN.G449.33 Capsicum annuum
CAN.G484.33 Capsicum annuum
CANSAT78G0502 Cannabis sativa
CARHR081540 Cardamine hirsuta
CARHR286220 Cardamine hirsuta
Carub.0003s0645 Capsella rubella
Carub.0008s0884 Capsella rubella
Ca_01937_v3 Cicer arietinum L.
Ca_21493_v3 Cicer arietinum L.
Ca_28415_v3 Cicer arietinum L.
CBR_g3614 Chara braunii
Cc03_g01920 Coffea canephora
CDE02G3502 Ceratophyllum demersum
CDE08G1566 Ceratophyllum demersum
Cfa015385 Carpinus fangiana
Ciclev10004703m.g Citrus clementina
CiPaw.01G148600 Carya illinoinensis
CiPaw.02G082800 Carya illinoinensis
ClCG06G005130 Citrullus lanatus
COL.COLO4_13868 Corchorus olitorius
Cpa.g.sc16.172 Carica papaya
Cre15.g635350 Chlamydomonas reinhardtii
CsaV3_6G017170 Cucumis sativus L.
CSS0034341 Camellia sinensis var. sinensis
CSS0034707 Camellia sinensis var. sinensis
CSS0036548 Camellia sinensis var. sinensis
CSS0043025 Camellia sinensis var. sinensis
CSS0050135 Camellia sinensis var. sinensis
DCAR_023284 Daucus carota
DCAR_027075 Daucus carota
Dinv44380 Davidia involucrata
Duzib052G0726 Durio zibethinus
Duzib151G0063 Durio zibethinus
Duzib212G0808 Durio zibethinus
ECA240G4511 Erigeron canadensis
EL10Ac3g06602 Beta vulgaris
Eucgr.B01318 Eucalyptus grandis
FAN12G0276 Fragaria x ananassa
FAN12G1449 Fragaria x ananassa
FAN17G3001 Fragaria x ananassa
FvH4_4g18050 Fragaria vesca
Glyma.07G247300 Glycine max
Glyma.09G044700 Glycine max
Glyma.15G148200 Glycine max
Glyma.17G026500 Glycine max
Gohir.A09G062500 Gossypium hirsutum
Gohir.A09G239000 Gossypium hirsutum
Gohir.A10G164200 Gossypium hirsutum
Gohir.D09G061400 Gossypium hirsutum
Gohir.D09G239900 Gossypium hirsutum
Gohir.D10G170500 Gossypium hirsutum
Gorai.006G076000 Gossypium raimondii
Gorai.006G262700 Gossypium raimondii
Gorai.011G190400 Gossypium raimondii
GSVIVG01017761001 Vitis vinifera
GSVIVG01028020001 Vitis vinifera
HanXRQChr03g0080961 Helianthus annuus
HanXRQChr13g0411281 Helianthus annuus
Haze_01200 Corylus avellana
Haze_26468 Corylus avellana
Hma1.2p1_0078F.1_g040530 Hydrangea macrophylla
Hma1.2p1_2670F.1_g326610 Hydrangea macrophylla
HPP92_000401 Vanilla planifolia
HPP92_000402 Vanilla planifolia
Hund24894 Selenicereus undatus
Lalb_Chr12g0196591 Lupinus albus
Lalb_Chr13g0303571 Lupinus albus
Lalb_Chr15g0083501 Lupinus albus
Lj3A817G85 Lonicera japonica
Lj3C817G11 Lonicera japonica
Lj3C819G5 Lonicera japonica
Lj4g0016454 Lotus japonicus
Lj6C675G15 Lonicera japonica
Lj6C676T4 Lonicera japonica
Lj6g0003576 Lotus japonicus
Lsat_1_v5_gn_5_53081 Lactuca sativa
Lsat_1_v5_gn_5_64200 Lactuca sativa
Lsat_1_v5_gn_9_85880 Lactuca sativa
Manes.03G195300 Manihot esculenta
MBI19_g29220_MAGBIO Magnolia biondii
MCO11G781 Micromonas commoda
MD13G1168500 Malus domestica
MD16G1168900 Malus domestica
Medtr2g436780 Medicago truncatula
Medtr4g119900 Medicago truncatula
MELO3C021330.2 Cucumis melo
Migut.G00162 Erythranthe guttata
MSTRG.10095 Avicennia marina
MSTRG.3915 Avicennia marina
Nitab4.5_0000570g0130 Nicotiana tabacum
Nitab4.5_0001233g0100 Nicotiana tabacum
Nitab4.5_0001904g0120 Nicotiana tabacum
Nitab4.5_0003466g0120 Nicotiana tabacum
Nn3g21443 Nelumbo nucifera
Nn4g25839 Nelumbo nucifera
Oeu027725.1 Olea europaea
Oeu029702.2 Olea europaea
Os07g0671700 Oryza sativa ssp. japonica
Peaxi162Scf00086g00431 Petunia axillaris
Peaxi162Scf00576g00011 Petunia axillaris
PGR031G2129 Punica granatum
PGSC0003DMG400004710 Solanum tuberosum
PGSC0003DMG400008452 Solanum tuberosum
Phvul.003G105500 Phaseolus vulgaris
Phvul.009G248200 Phaseolus vulgaris
Potri.008G222700 Populus trichocarpa
Potri.010G014600 Populus trichocarpa
Pp3c11_14160 Physcomitrium patens
Pp3c1_7870 Physcomitrium patens
PRCOL_00004311 Prasinoderma coloniale
Prupe.1G136600 Prunus persica
Psat0s3456g0080 Pisum sativum
Psat4g027520 Pisum sativum
PSO210G5853 Papaver somniferum
PSO302G0100 Papaver somniferum
QL06p008928 Quercus lobata
RcHm_v2.0_Chr4g0422261 Rosa chinensis
Rhsim02G0009000 Rhododendron simsii
Rhsim04G0222300 Rhododendron simsii
SalBow2G1467 Salvia bowleyana
Sc13g0003460 Simmondsia chinensis
Sc19g0005320 Simmondsia chinensis
Sed0016171 Sechium edule
Sed0022843 Sechium edule
Sed0024544 Sechium edule
SEGI_12073 Sequoiadendron giganteum
SEGI_36545 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36295 Striga asiatica
SMO118G0363 Selaginella moellendorffii
Solyc05g054240.3 Solanum lycopersicum
Solyc12g099560.2 Solanum lycopersicum
Sopen05g032730 Solanum pennellii
Sopen12g034240 Solanum pennellii
Sp2g19400 Schrenkiella parvula
Sp3g05880 Schrenkiella parvula
TAR362G0702 Trochodendron aralioides
TAR365G0782 Trochodendron aralioides
THA.LOC104802688 Tarenaya hassleriana
THA.LOC104818926 Tarenaya hassleriana
Thecc.04G284900 Theobroma cacao
Thhalv10003986m.g Eutrema salsugineum
Thhalv10020486m.g Eutrema salsugineum
TPR.G13846 Trifolium pratense
TPR.G3204 Trifolium pratense
TWI09G1119 Tripterygium wilfordii
TWI73G0330 Tripterygium wilfordii
unitig_748.g8732 Utricularia gibba
vmacro08153 Vaccinium macrocarpon
vmacro15235 Vaccinium macrocarpon
VMungo1215G1558 Vigna mungo
VMungo1309G0809 Vigna mungo
Zm00001eb111180 Zea mays
Zm00001eb330380 Zea mays

User provided reference genes

Program Settings