Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00920 Brassica napus
A09p12580 Brassica napus
Aa31LG8G16770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.940 Anthoceros agrestis
Actinidia17501 Actinidia chinensis
Actinidia29881 Actinidia chinensis
Ah.09g230330 Amaranthus hybridus
AL3G48440 Arabidopsis lyrata
Aqoxy7G01359 Aquilegia oxysepala
Aqoxy7G03958 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea
AT2G19790 Arabidopsis thaliana
ATR0705G079 Amborella trichopoda
Atru.chr7.1508 Acer truncatum
AUR62021360 Chenopodium quinoa
AUR62033272 Chenopodium quinoa
BcaB03g16769 Brassica carinata
BcaC04g22820 Brassica carinata
BcaC06g36622 Brassica carinata
BolC7t40613H Brassica oleracea
BolC9t54396H Brassica oleracea
BraA07t27892Z Brassica rapa
BraA09t36905Z Brassica rapa
C07p02080 Brassica napus
C09p14940 Brassica napus
CAN.G1058.10 Capsicum annuum
CANSAT56G1795 Cannabis sativa
CARHR110250 Cardamine hirsuta
Carub.0003s3407 Capsella rubella
Ca_17379_v3 Cicer arietinum L.
CBR_g2797 Chara braunii
Cc06_g10770 Coffea canephora
CDE05G2264 Ceratophyllum demersum
CDE05G3423 Ceratophyllum demersum
Ciclev10009831m.g Citrus clementina
CiPaw.03G221100 Carya illinoinensis
CiPaw.04G154300 Carya illinoinensis
ClCG03G015970 Citrullus lanatus
COL.COLO4_18271 Corchorus olitorius
COL.COLO4_18272 Corchorus olitorius
Cpa.g.sc78.44 Carica papaya
Cre07.g330950 Chlamydomonas reinhardtii
CsaV3_1G039990 Cucumis sativus L.
CSS0012070 Camellia sinensis var. sinensis
DCAR_028635 Daucus carota
Dinv42272 Davidia involucrata
Duzib150G0327 Durio zibethinus
Duzib187G0631 Durio zibethinus
ECA236G3815 Erigeron canadensis
EL10Ac8g18347 Beta vulgaris
Eucgr.C00951 Eucalyptus grandis
FAN08G2450 Fragaria x ananassa
FAN18G0868 Fragaria x ananassa
FAN19G1758 Fragaria x ananassa
FAN26G0314 Fragaria x ananassa
FAN26G0318 Fragaria x ananassa
FAN28G0398 Fragaria x ananassa
FvH4_1g06580 Fragaria vesca
FvH4_5g22770 Fragaria vesca
Glyma.01G005300 Glycine max
Glyma.05G224800 Glycine max
Glyma.07G126300 Glycine max
Glyma.08G031600 Glycine max
Gohir.A05G027200 Gossypium hirsutum
Gohir.A13G194600 Gossypium hirsutum
Gohir.D05G029100 Gossypium hirsutum
Gohir.D13G200300 Gossypium hirsutum
Gorai.009G029200 Gossypium raimondii
Gorai.013G229100 Gossypium raimondii
GSVIVG01015270001 Vitis vinifera
HanXRQChr09g0238561 Helianthus annuus
Haze_25852 Corylus avellana
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla
HPP92_009846 Vanilla planifolia
HPP92_024117 Vanilla planifolia
Hund26299 Selenicereus undatus
Lalb_Chr14g0375221 Lupinus albus
Lj2g0010400 Lotus japonicus
Lj4g0006741 Lotus japonicus
Lsat_1_v5_gn_8_88280 Lactuca sativa
Manes.03G029400 Manihot esculenta
Manes.16G106500 Manihot esculenta
Mapoly0016s0005 Marchantia polymorpha
MBI04_g06989_MAGBIO Magnolia biondii
MCO15G266 Micromonas commoda
MD02G1069000 Malus domestica
MD15G1200600 Malus domestica
Medtr7g100010 Medicago truncatula
Medtr8g102180 Medicago truncatula
MELO3C015429.2 Cucumis melo
Migut.J01079 Erythranthe guttata
Migut.K00562 Erythranthe guttata
MSTRG.19541 Avicennia marina
MSTRG.6030 Avicennia marina
Nitab4.5_0004180g0010 Nicotiana tabacum
Nn8g39010 Nelumbo nucifera
Oeu036246.1 Olea europaea
Oeu048292.1 Olea europaea
Os08g0395300 Oryza sativa ssp. japonica
Os10g0368400 Oryza sativa ssp. japonica
Peaxi162Scf00298g00114 Petunia axillaris
PGR102G1239 Punica granatum
PGR142G0605 Punica granatum
PGSC0003DMG400028942 Solanum tuberosum
Phvul.002G306700 Phaseolus vulgaris
Phvul.004G173800 Phaseolus vulgaris
Phvul.008G154900 Phaseolus vulgaris
Potri.006G149100 Populus trichocarpa
Pp3c14_14670 Physcomitrium patens
Prupe.7G216600 Prunus persica
Psat7g018560 Pisum sativum
PSO063G4962 Papaver somniferum
PSO210G0713 Papaver somniferum
PSO210G7720 Papaver somniferum
PSO782G5042 Papaver somniferum
PSO832G0835 Papaver somniferum
QL02p086970 Quercus lobata
RcHm_v2.0_Chr2g0092321 Rosa chinensis
Rhsim03G0235600 Rhododendron simsii
Sabra06G0117900 Salix brachista
SalBow6G5864 Salvia bowleyana
Sc08g0008140 Simmondsia chinensis
Sed0020746 Sechium edule
SEGI_24636 Sequoiadendron giganteum
SGA_v2.0_scaffold279G46782 Striga asiatica
SGA_v2.0_scaffold302G47808 Striga asiatica
SHI01895 Sapria himalayana
SHI03952 Sapria himalayana
SHI06560 Sapria himalayana
SHI13831 Sapria himalayana
SHI16713 Sapria himalayana
SHI19583 Sapria himalayana
SHI20141 Sapria himalayana
SHI21563 Sapria himalayana
SHI23604 Sapria himalayana
SHI27184 Sapria himalayana
SHI29266 Sapria himalayana
SHI33029 Sapria himalayana
SHI33597 Sapria himalayana
SHI34965 Sapria himalayana
SHI34978 Sapria himalayana
SHI35365 Sapria himalayana
SHI35822 Sapria himalayana
SHI35880 Sapria himalayana
SHI36351 Sapria himalayana
SHI36761 Sapria himalayana
SHI38667 Sapria himalayana
SHI40238 Sapria himalayana
SHI42703 Sapria himalayana
SHI42924 Sapria himalayana
SHI43352 Sapria himalayana
SHI43902 Sapria himalayana
SHI43903 Sapria himalayana
SHI44502 Sapria himalayana
SHI44503 Sapria himalayana
SHI46084 Sapria himalayana
SHI46441 Sapria himalayana
SHI47575 Sapria himalayana
SHI47576 Sapria himalayana
SHI47843 Sapria himalayana
SHI48148 Sapria himalayana
SHI48149 Sapria himalayana
SHI48305 Sapria himalayana
SHI49175 Sapria himalayana
SHI49839 Sapria himalayana
SHI50198 Sapria himalayana
SHI50902 Sapria himalayana
SHI51484 Sapria himalayana
SHI51537 Sapria himalayana
SHI51872 Sapria himalayana
SHI52555 Sapria himalayana
SHI52623 Sapria himalayana
SHI52725 Sapria himalayana
SHI52965 Sapria himalayana
SHI53541 Sapria himalayana
SHI53623 Sapria himalayana
SHI53653 Sapria himalayana
SHI54080 Sapria himalayana
SMO196G0114 Selaginella moellendorffii
Solyc05g026130.3 Solanum lycopersicum
Sopen05g022340 Solanum pennellii
Sp3g33140 Schrenkiella parvula
TAR636G1139 Trochodendron aralioides
THA.LOC104814582 Tarenaya hassleriana
THA.LOC104820037 Tarenaya hassleriana
Thecc.09G096900 Theobroma cacao
Thhalv10002117m.g Eutrema salsugineum
TPR.G34776 Trifolium pratense
TWI63G0367 Tripterygium wilfordii
unitig_26.g9704 Utricularia gibba
vmacro06264 Vaccinium macrocarpon
VMungo0251G1053 Vigna mungo
VMungo0464G2126 Vigna mungo
Zm00001eb178620 Zea mays

User provided reference genes

Program Settings