Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06450 Brassica napus
A02p26460 Brassica napus
A03p29240 Brassica napus
A08p18430 Brassica napus
A09p28280 Brassica napus
Aa31LG2G18400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.420 Anthoceros agrestis
Actinidia22287 Actinidia chinensis
Ah.12g060790 Amaranthus hybridus
AL6G44970 Arabidopsis lyrata
AL7G20150 Arabidopsis lyrata
Aqoxy7G03391 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.36ASSY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PTAL7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YXTM1W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZW8IXI Arachis hypogaea
AT4G31830 Arabidopsis thaliana
Atru.chr7.178 Acer truncatum
Atru.chr7.2561 Acer truncatum
AUR62024806 Chenopodium quinoa
AUR62029823 Chenopodium quinoa
AUR62032414 Chenopodium quinoa
BcaB01g01557 Brassica carinata
BcaB01g02731 Brassica carinata
BcaB03g12722 Brassica carinata
BcaB05g23874 Brassica carinata
BcaC01g01054 Brassica carinata
BcaC01g01055 Brassica carinata
BcaC01g04654 Brassica carinata
BcaC03g16382 Brassica carinata
BcaC04g21087 Brassica carinata
BcaC09g51975 Brassica carinata
BcaNung03115 Brassica carinata
BolC1t00701H Brassica oleracea
BolC2t10246H Brassica oleracea
BolC3t15837H Brassica oleracea
BolC3t21069H Brassica oleracea
BolC9t56418H Brassica oleracea
BraA01t00606Z Brassica rapa
BraA02t07649Z Brassica rapa
BraA03t12119Z Brassica rapa
BraA08t33803Z Brassica rapa
BraA09t38397Z Brassica rapa
C01p07090 Brassica napus
C02p42080 Brassica napus
C03p35250 Brassica napus
C03p87500 Brassica napus
C09p35850 Brassica napus
CAN.G353.10 Capsicum annuum
CAN.G353.11 Capsicum annuum
CANSAT25G3000 Cannabis sativa
CARHR239750 Cardamine hirsuta
CARHR255710 Cardamine hirsuta
Carub.0006s2963 Capsella rubella
Carub.0007s0872 Capsella rubella
Ca_13066_v3 Cicer arietinum L.
Ca_21130_v3 Cicer arietinum L.
Ca_28168_v3 Cicer arietinum L.
Cc06_g14890 Coffea canephora
Cc08_g07080 Coffea canephora
Cc08_g07090 Coffea canephora
Cc08_g07120 Coffea canephora
Cfa013050 Carpinus fangiana
Cfa020822 Carpinus fangiana
Ciclev10010389m.g Citrus clementina
CiPaw.03G202100 Carya illinoinensis
CiPaw.07G230500 Carya illinoinensis
ClCG05G016230 Citrullus lanatus
ClCG06G012430 Citrullus lanatus
COL.COLO4_18813 Corchorus olitorius
COL.COLO4_18953 Corchorus olitorius
Cpa.g.sc127.42 Carica papaya
Cpa.g.sc136.44 Carica papaya
CsaV3_4G036500 Cucumis sativus L.
CSS0001588 Camellia sinensis var. sinensis
CSS0041430 Camellia sinensis var. sinensis
DCAR_019373 Daucus carota
DCAR_022861 Daucus carota
Dinv42850 Davidia involucrata
Dinv43250 Davidia involucrata
Duzib168G0976 Durio zibethinus
ECA232G2703 Erigeron canadensis
ECA240G1327 Erigeron canadensis
EL10Ac2g02500 Beta vulgaris
EL10Ac4g10348 Beta vulgaris
Eucgr.C00343 Eucalyptus grandis
Eucgr.C02607 Eucalyptus grandis
Eucgr.L02917 Eucalyptus grandis
FAN15G0945 Fragaria x ananassa
FAN20G2483 Fragaria x ananassa
FAN23G1251 Fragaria x ananassa
FAN26G0389 Fragaria x ananassa
FAN27G2394 Fragaria x ananassa
FAN28G2066 Fragaria x ananassa
Glyma.02G204400 Glycine max
Glyma.14G101900 Glycine max
Glyma.17G223300 Glycine max
Gohir.A05G053200 Gossypium hirsutum
Gohir.A05G059800 Gossypium hirsutum
Gohir.D05G054800 Gossypium hirsutum
Gohir.D05G062000 Gossypium hirsutum
Gorai.009G056500 Gossypium raimondii
Gorai.009G063100 Gossypium raimondii
GSVIVG01035971001 Vitis vinifera
HanXRQChr09g0274741 Helianthus annuus
Haze_19201 Corylus avellana
Haze_21413 Corylus avellana
Haze_21415 Corylus avellana
Hma1.2p1_0028F.1_g017600 Hydrangea macrophylla
HPP92_010736 Vanilla planifolia
Lalb_Chr08g0234291 Lupinus albus
Lalb_Chr11g0072661 Lupinus albus
Lalb_Chr14g0361751 Lupinus albus
Lj1g0009607 Lotus japonicus
Lj5g0009668 Lotus japonicus
Lj5g0020130 Lotus japonicus
Lsat_1_v5_gn_4_88160 Lactuca sativa
Lsat_1_v5_gn_7_49941 Lactuca sativa
Lsat_1_v5_gn_8_63501 Lactuca sativa
Manes.03G008400 Manihot esculenta
Manes.16G130000 Manihot esculenta
Mapoly0006s0148 Marchantia polymorpha
MBI15_g18244_MAGBIO Magnolia biondii
MD08G1056200 Malus domestica
MD15G1040800 Malus domestica
MD15G1144300 Malus domestica
Medtr1g014110 Medicago truncatula
Medtr4g130810 Medicago truncatula
MELO3C010217.2 Cucumis melo
MELO3C016955.2 Cucumis melo
Migut.A00356 Erythranthe guttata
Migut.K00320 Erythranthe guttata
MSTRG.6141 Avicennia marina
Nitab4.5_0002011g0040 Nicotiana tabacum
Nitab4.5_0002011g0090 Nicotiana tabacum
Nitab4.5_0002947g0020 Nicotiana tabacum
Nitab4.5_0003563g0040 Nicotiana tabacum
Nitab4.5_0006523g0040 Nicotiana tabacum
Nn2g12399 Nelumbo nucifera
Nn2g14054 Nelumbo nucifera
Nn2g14056 Nelumbo nucifera
Nn4g26608 Nelumbo nucifera
Nn7g38002 Nelumbo nucifera
Nn8g39910 Nelumbo nucifera
Oeu009646.1 Olea europaea
Oeu021302.1 Olea europaea
Os09g0127700 Oryza sativa ssp. japonica
Peaxi162Scf00045g02028 Petunia axillaris
Peaxi162Scf00045g02036 Petunia axillaris
PGR044G0872 Punica granatum
PGSC0003DMG400026298 Solanum tuberosum
PGSC0003DMG401011138 Solanum tuberosum
Phvul.001G041500 Phaseolus vulgaris
Phvul.003G155700 Phaseolus vulgaris
Potri.006G183800 Populus trichocarpa
Potri.018G018300 Populus trichocarpa
Potri.018G106300 Populus trichocarpa
Pp3c13_16580 Physcomitrium patens
Prupe.1G394000 Prunus persica
Prupe.1G394100 Prunus persica
Prupe.7G263500 Prunus persica
Psat0s2403g0200 Pisum sativum
Psat6g025880 Pisum sativum
PSO339G2253 Papaver somniferum
QL02p018819 Quercus lobata
QL02p093340 Quercus lobata
RcHm_v2.0_Chr6g0299391 Rosa chinensis
Rhsim02G0212800 Rhododendron simsii
Sabra06G0139800 Salix brachista
SalBow1G7165 Salvia bowleyana
SalBow4G2912 Salvia bowleyana
Sc08g0005190 Simmondsia chinensis
Sc08g0005200 Simmondsia chinensis
Sed0002480 Sechium edule
Sed0019715 Sechium edule
SGA_v2.0_scaffold12G06006 Striga asiatica
SGA_v2.0_scaffold22G09905 Striga asiatica
SHI21076 Sapria himalayana
Solyc08g006800.3 Solanum lycopersicum
Sopen07g001680 Solanum pennellii
Sopen08g002750 Solanum pennellii
Sp6g06610 Schrenkiella parvula
Sp7g29640 Schrenkiella parvula
TAR383G0003 Trochodendron aralioides
TAR625G1231 Trochodendron aralioides
THA.LOC104803862 Tarenaya hassleriana
Thecc.09G029400 Theobroma cacao
Thhalv10026655m.g Eutrema salsugineum
Thhalv10029345m.g Eutrema salsugineum
TPR.G24858 Trifolium pratense
TPR.G38873 Trifolium pratense
TWI34G0563 Tripterygium wilfordii
unitig_748.g7378 Utricularia gibba
vmacro06076 Vaccinium macrocarpon
Zm00001eb095580 Zea mays

User provided reference genes

Program Settings